diff --git a/pkl-cli/src/main/kotlin/org/pkl/cli/CliEvaluator.kt b/pkl-cli/src/main/kotlin/org/pkl/cli/CliEvaluator.kt
index dfd8d354e..6349aea22 100644
--- a/pkl-cli/src/main/kotlin/org/pkl/cli/CliEvaluator.kt
+++ b/pkl-cli/src/main/kotlin/org/pkl/cli/CliEvaluator.kt
@@ -123,18 +123,23 @@ constructor(
 
     return options.base.normalizedSourceModules.associateWith { uri ->
       val moduleDir: String? =
-        IoUtils.toPath(uri)?.let {
-          IoUtils.relativize(it.parent, workingDir).toString().ifEmpty { "." }
-        }
-      val moduleKey =
-        try {
-          moduleResolver.resolve(uri)
-        } catch (e: VmException) {
-          throw e.toPklException(stackFrameTransformer, options.base.color?.hasColor() ?: false)
-        }
+        if (!uri.isAbsolute && uri.schemeSpecificPart.startsWith("@")) null
+        else
+          IoUtils.toPath(uri)?.let {
+            IoUtils.relativize(it.parent, workingDir).toString().ifEmpty { "." }
+          }
+      val moduleName =
+        if (!uri.isAbsolute && uri.schemeSpecificPart.startsWith("@"))
+          IoUtils.getNameWithoutExtension(uri.path)
+        else
+          try {
+            IoUtils.inferModuleName(moduleResolver.resolve(uri))
+          } catch (e: VmException) {
+            throw e.toPklException(stackFrameTransformer, options.base.color?.hasColor() ?: false)
+          }
       val substituted =
         pathStr
-          .replace("%{moduleName}", IoUtils.inferModuleName(moduleKey))
+          .replace("%{moduleName}", moduleName)
           .replace("%{outputFormat}", options.outputFormat ?: "%{outputFormat}")
           .replace("%{moduleDir}", moduleDir ?: "%{moduleDir}")
       if (substituted.contains("%{moduleDir}")) {
diff --git a/pkl-cli/src/test/kotlin/org/pkl/cli/CliEvaluatorTest.kt b/pkl-cli/src/test/kotlin/org/pkl/cli/CliEvaluatorTest.kt
index cbc8b0e54..dbeb139b5 100644
--- a/pkl-cli/src/test/kotlin/org/pkl/cli/CliEvaluatorTest.kt
+++ b/pkl-cli/src/test/kotlin/org/pkl/cli/CliEvaluatorTest.kt
@@ -1798,6 +1798,31 @@ result = someLib.x
       )
   }
 
+  @Test
+  fun `eval dependency notation source with multiple file output`(
+    @TempDir tempDir: Path,
+    @TempDir cacheDir: Path,
+  ) {
+    PackageServer.populateCacheDir(cacheDir)
+    val projectPath =
+      FileTestUtils.rootProjectDir.resolve(
+        "pkl-commons-cli/src/test/resources/org/pkl/commons/cli/project1/"
+      )
+    val options =
+      CliEvaluatorOptions(
+        CliBaseOptions(
+          sourceModules = listOf(URI("@fruit/catalog/basket.pkl")),
+          projectDir = projectPath,
+          moduleCacheDir = cacheDir,
+          workingDir = tempDir,
+        ),
+        multipleFileOutputPath = "output",
+      )
+    val output = evalToConsole(options)
+    assertThat(output.split('\n')).hasSize(3)
+    assertThat(tempDir.resolve("output").listDirectoryEntries()).hasSize(2)
+  }
+
   private fun evalModuleThatImportsPackage(certsFile: Path?, testPort: Int = -1) {
     val moduleUri =
       writePklFile(
diff --git a/pkl-commons-cli/src/test/resources/org/pkl/commons/cli/project1/PklProject b/pkl-commons-cli/src/test/resources/org/pkl/commons/cli/project1/PklProject
index e8a2a74e2..02c13abd1 100644
--- a/pkl-commons-cli/src/test/resources/org/pkl/commons/cli/project1/PklProject
+++ b/pkl-commons-cli/src/test/resources/org/pkl/commons/cli/project1/PklProject
@@ -1,5 +1,5 @@
 amends "pkl:Project"
 
 dependencies {
-  ["fruit"] { uri = "package://localhost:0/fruit@1.1.0" }
+  ["fruit"] { uri = "package://localhost:0/fruit@1.2.0" }
 }
diff --git a/pkl-commons-cli/src/test/resources/org/pkl/commons/cli/project1/PklProject.deps.json b/pkl-commons-cli/src/test/resources/org/pkl/commons/cli/project1/PklProject.deps.json
index 09a8d03b0..fd15f0863 100644
--- a/pkl-commons-cli/src/test/resources/org/pkl/commons/cli/project1/PklProject.deps.json
+++ b/pkl-commons-cli/src/test/resources/org/pkl/commons/cli/project1/PklProject.deps.json
@@ -3,7 +3,7 @@
   "resolvedDependencies": {
     "package://localhost:0/fruit@1": {
       "type": "remote",
-      "uri": "projectpackage://localhost:0/fruit@1.1.0",
+      "uri": "projectpackage://localhost:0/fruit@1.2.0",
       "checksums": {
         "sha256": "$skipChecksumVerification"
       }
diff --git a/pkl-commons-test/src/main/files/packages/fruit@1.2.0/fruit@1.2.0.json b/pkl-commons-test/src/main/files/packages/fruit@1.2.0/fruit@1.2.0.json
new file mode 100644
index 000000000..242ad7839
--- /dev/null
+++ b/pkl-commons-test/src/main/files/packages/fruit@1.2.0/fruit@1.2.0.json
@@ -0,0 +1,19 @@
+{
+  "schemaVersion": 1,
+  "packageUri": "package://localhost:0/fruit@1.2.0",
+  "name": "fruit",
+  "version": "1.2.0",
+  "packageZipUrl": "https://localhost:0/fruit@1.2.0/fruit@1.2.0.zip",
+  "dependencies": {},
+  "packageZipChecksums": {
+    "sha256": "$computedChecksum"
+  },
+  "sourceCode": "https://example.com/fruit",
+  "documentation": "https://example.com/fruit-docs",
+  "license": "UNLICENSED",
+  "authors": [
+    "apple-1@example.com",
+    "banana-2@example.com"
+  ],
+  "issueTracker": "https://example.com/fruit/issues"
+}
diff --git a/pkl-commons-test/src/main/files/packages/fruit@1.2.0/package/Fruit.pkl b/pkl-commons-test/src/main/files/packages/fruit@1.2.0/package/Fruit.pkl
new file mode 100644
index 000000000..3dbfa98b6
--- /dev/null
+++ b/pkl-commons-test/src/main/files/packages/fruit@1.2.0/package/Fruit.pkl
@@ -0,0 +1,3 @@
+module fruit.Fruit
+
+name: String
diff --git a/pkl-commons-test/src/main/files/packages/fruit@1.2.0/package/Fruits.pkl b/pkl-commons-test/src/main/files/packages/fruit@1.2.0/package/Fruits.pkl
new file mode 100644
index 000000000..6c00fd62c
--- /dev/null
+++ b/pkl-commons-test/src/main/files/packages/fruit@1.2.0/package/Fruits.pkl
@@ -0,0 +1,13 @@
+module fruit.Fruits
+
+import "Fruit.pkl"
+
+fruits: Listing<Fruit>
+
+output {
+  files {
+    for (fruit in fruits) {
+      [fruit.name] = fruit.output
+    }
+  }
+}
diff --git a/pkl-commons-test/src/main/files/packages/fruit@1.2.0/package/catalog/apple.pkl b/pkl-commons-test/src/main/files/packages/fruit@1.2.0/package/catalog/apple.pkl
new file mode 100644
index 000000000..b6d2f16ed
--- /dev/null
+++ b/pkl-commons-test/src/main/files/packages/fruit@1.2.0/package/catalog/apple.pkl
@@ -0,0 +1,3 @@
+amends "../Fruit.pkl"
+
+name = "Apple 🍎"
diff --git a/pkl-commons-test/src/main/files/packages/fruit@1.2.0/package/catalog/basket.pkl b/pkl-commons-test/src/main/files/packages/fruit@1.2.0/package/catalog/basket.pkl
new file mode 100644
index 000000000..23ef5de32
--- /dev/null
+++ b/pkl-commons-test/src/main/files/packages/fruit@1.2.0/package/catalog/basket.pkl
@@ -0,0 +1,6 @@
+amends "../Fruits.pkl"
+
+fruits {
+  import("apple.pkl")
+  import("pineapple.pkl")
+}
diff --git a/pkl-commons-test/src/main/files/packages/fruit@1.2.0/package/catalog/pineapple.pkl b/pkl-commons-test/src/main/files/packages/fruit@1.2.0/package/catalog/pineapple.pkl
new file mode 100644
index 000000000..e1a02b700
--- /dev/null
+++ b/pkl-commons-test/src/main/files/packages/fruit@1.2.0/package/catalog/pineapple.pkl
@@ -0,0 +1,3 @@
+amends "../Fruit.pkl"
+
+name = "Pineapple 🍍"