Update to Gradle 8.6 (#245)
- Fix and clean up the pkl-commons-test build script. - Change tests to read test packages/certs directly from the file system instead of packaging and reading them from the class path. - Update expected checksums of some test packages. - Fix a conflict between Pkl's and Gradle's Kotlin libraries in the pkl-gradle project. - Fix build deprecation warnings. - Ensure Gradle distribution integrity with `distributionSha256Sum`. - Manually verify integrity of Gradle wrapper added by this commit.
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