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DependencyCheck/dependency-check-core/cobertura/org.owasp.dependencycheck.Engine.html
2016-09-06 08:48:40 -04:00

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<title>Coverage Report</title>
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<h5>Coverage Report - org.owasp.dependencycheck.Engine</h5>
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<thead><tr> <td class="heading">Classes in this File</td> <td class="heading"><a class="dfn" href="help.html" onclick="popupwindow('help.html'); return false;">Line Coverage</a></td> <td class="heading"><a class="dfn" href="help.html" onclick="popupwindow('help.html'); return false;">Branch Coverage</a></td> <td class="heading"><a class="dfn" href="help.html" onclick="popupwindow('help.html'); return false;">Complexity</a></td></tr></thead>
<tr><td><a href="org.owasp.dependencycheck.Engine.html">Engine</a></td><td><table cellpadding="0px" cellspacing="0px" class="percentgraph"><tr class="percentgraph"><td align="right" class="percentgraph" width="40">55%</td><td class="percentgraph"><div class="percentgraph"><div class="greenbar" style="width:55px"><span class="text">116/208</span></div></div></td></tr></table></td><td><table cellpadding="0px" cellspacing="0px" class="percentgraph"><tr class="percentgraph"><td align="right" class="percentgraph" width="40">62%</td><td class="percentgraph"><div class="percentgraph"><div class="greenbar" style="width:62px"><span class="text">41/66</span></div></div></td></tr></table></td><td class="value"><span class="hidden">3.4782608695652173;</span>3.478</td></tr>
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<table cellspacing="0" cellpadding="0" class="src">
<tr> <td class="numLine">&nbsp;1</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment">/*</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;2</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> * This file is part of dependency-check-core.</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;3</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> *</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;4</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> * Licensed under the Apache License, Version 2.0 (the "License");</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;5</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> * you may not use this file except in compliance with the License.</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;6</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> * You may obtain a copy of the License at</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;7</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> *</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;8</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> * http://www.apache.org/licenses/LICENSE-2.0</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;9</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> *</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;10</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> * Unless required by applicable law or agreed to in writing, software</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;11</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> * distributed under the License is distributed on an "AS IS" BASIS,</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;12</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;13</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> * See the License for the specific language governing permissions and</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;14</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> * limitations under the License.</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;15</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> *</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;16</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> * Copyright (c) 2012 Jeremy Long. All Rights Reserved.</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;17</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> */</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;18</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="keyword">package</span> org.owasp.dependencycheck;</pre></td></tr>
<tr> <td class="numLine">&nbsp;19</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;</pre></td></tr>
<tr> <td class="numLine">&nbsp;20</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="keyword">import</span> org.owasp.dependencycheck.analyzer.AnalysisPhase;</pre></td></tr>
<tr> <td class="numLine">&nbsp;21</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="keyword">import</span> org.owasp.dependencycheck.analyzer.Analyzer;</pre></td></tr>
<tr> <td class="numLine">&nbsp;22</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="keyword">import</span> org.owasp.dependencycheck.analyzer.AnalyzerService;</pre></td></tr>
<tr> <td class="numLine">&nbsp;23</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="keyword">import</span> org.owasp.dependencycheck.analyzer.FileTypeAnalyzer;</pre></td></tr>
<tr> <td class="numLine">&nbsp;24</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="keyword">import</span> org.owasp.dependencycheck.analyzer.exception.AnalysisException;</pre></td></tr>
<tr> <td class="numLine">&nbsp;25</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="keyword">import</span> org.owasp.dependencycheck.data.nvdcve.ConnectionFactory;</pre></td></tr>
<tr> <td class="numLine">&nbsp;26</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="keyword">import</span> org.owasp.dependencycheck.data.nvdcve.CveDB;</pre></td></tr>
<tr> <td class="numLine">&nbsp;27</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="keyword">import</span> org.owasp.dependencycheck.data.nvdcve.DatabaseException;</pre></td></tr>
<tr> <td class="numLine">&nbsp;28</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="keyword">import</span> org.owasp.dependencycheck.data.update.CachedWebDataSource;</pre></td></tr>
<tr> <td class="numLine">&nbsp;29</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="keyword">import</span> org.owasp.dependencycheck.data.update.UpdateService;</pre></td></tr>
<tr> <td class="numLine">&nbsp;30</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="keyword">import</span> org.owasp.dependencycheck.data.update.exception.UpdateException;</pre></td></tr>
<tr> <td class="numLine">&nbsp;31</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="keyword">import</span> org.owasp.dependencycheck.dependency.Dependency;</pre></td></tr>
<tr> <td class="numLine">&nbsp;32</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="keyword">import</span> org.owasp.dependencycheck.exception.NoDataException;</pre></td></tr>
<tr> <td class="numLine">&nbsp;33</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="keyword">import</span> org.owasp.dependencycheck.exception.ExceptionCollection;</pre></td></tr>
<tr> <td class="numLine">&nbsp;34</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="keyword">import</span> org.owasp.dependencycheck.exception.InitializationException;</pre></td></tr>
<tr> <td class="numLine">&nbsp;35</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="keyword">import</span> org.owasp.dependencycheck.utils.InvalidSettingException;</pre></td></tr>
<tr> <td class="numLine">&nbsp;36</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="keyword">import</span> org.owasp.dependencycheck.utils.Settings;</pre></td></tr>
<tr> <td class="numLine">&nbsp;37</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="keyword">import</span> org.slf4j.Logger;</pre></td></tr>
<tr> <td class="numLine">&nbsp;38</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="keyword">import</span> org.slf4j.LoggerFactory;</pre></td></tr>
<tr> <td class="numLine">&nbsp;39</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;</pre></td></tr>
<tr> <td class="numLine">&nbsp;40</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="keyword">import</span> java.io.File;</pre></td></tr>
<tr> <td class="numLine">&nbsp;41</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="keyword">import</span> java.io.FileFilter;</pre></td></tr>
<tr> <td class="numLine">&nbsp;42</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="keyword">import</span> java.util.ArrayList;</pre></td></tr>
<tr> <td class="numLine">&nbsp;43</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="keyword">import</span> java.util.Collection;</pre></td></tr>
<tr> <td class="numLine">&nbsp;44</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="keyword">import</span> java.util.EnumMap;</pre></td></tr>
<tr> <td class="numLine">&nbsp;45</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="keyword">import</span> java.util.HashSet;</pre></td></tr>
<tr> <td class="numLine">&nbsp;46</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="keyword">import</span> java.util.Iterator;</pre></td></tr>
<tr> <td class="numLine">&nbsp;47</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="keyword">import</span> java.util.List;</pre></td></tr>
<tr> <td class="numLine">&nbsp;48</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="keyword">import</span> java.util.Map;</pre></td></tr>
<tr> <td class="numLine">&nbsp;49</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="keyword">import</span> java.util.Set;</pre></td></tr>
<tr> <td class="numLine">&nbsp;50</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;</pre></td></tr>
<tr> <td class="numLine">&nbsp;51</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment">/**</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;52</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> * Scans files, directories, etc. for Dependencies. Analyzers are loaded and</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;53</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> * used to process the files found by the scan, if a file is encountered and an</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;54</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> * Analyzer is associated with the file type then the file is turned into a</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;55</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> * dependency.</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;56</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> *</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;57</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> * @author Jeremy Long</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;58</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> */</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;59</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="keyword">public</span> <span class="keyword">class</span> Engine <span class="keyword">implements</span> FileFilter {</pre></td></tr>
<tr> <td class="numLine">&nbsp;60</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;</pre></td></tr>
<tr> <td class="numLine">&nbsp;61</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; <span class="comment">/**</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;62</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> * The list of dependencies.</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;63</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> */</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;64</td> <td class="nbHitsCovered">&nbsp;4</td> <td class="src"><pre class="src">&nbsp; <span class="keyword">private</span> List&lt;Dependency&gt; dependencies = <span class="keyword">new</span> ArrayList&lt;Dependency&gt;();</pre></td></tr>
<tr> <td class="numLine">&nbsp;65</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; <span class="comment">/**</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;66</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> * A Map of analyzers grouped by Analysis phase.</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;67</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> */</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;68</td> <td class="nbHitsCovered">&nbsp;4</td> <td class="src"><pre class="src">&nbsp; <span class="keyword">private</span> <span class="keyword">final</span> Map&lt;AnalysisPhase, List&lt;Analyzer&gt;&gt; analyzers = <span class="keyword">new</span> EnumMap&lt;AnalysisPhase, List&lt;Analyzer&gt;&gt;(AnalysisPhase.<span class="keyword">class</span>);</pre></td></tr>
<tr> <td class="numLine">&nbsp;69</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;</pre></td></tr>
<tr> <td class="numLine">&nbsp;70</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; <span class="comment">/**</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;71</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> * A Map of analyzers grouped by Analysis phase.</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;72</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> */</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;73</td> <td class="nbHitsCovered">&nbsp;4</td> <td class="src"><pre class="src">&nbsp; <span class="keyword">private</span> <span class="keyword">final</span> Set&lt;FileTypeAnalyzer&gt; fileTypeAnalyzers = <span class="keyword">new</span> HashSet&lt;FileTypeAnalyzer&gt;();</pre></td></tr>
<tr> <td class="numLine">&nbsp;74</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;</pre></td></tr>
<tr> <td class="numLine">&nbsp;75</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; <span class="comment">/**</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;76</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> * The ClassLoader to use when dynamically loading Analyzer and Update</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;77</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> * services.</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;78</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> */</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;79</td> <td class="nbHitsCovered">&nbsp;4</td> <td class="src"><pre class="src">&nbsp; <span class="keyword">private</span> ClassLoader serviceClassLoader = Thread.currentThread().getContextClassLoader();</pre></td></tr>
<tr> <td class="numLine">&nbsp;80</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; <span class="comment">/**</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;81</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> * The Logger for use throughout the class.</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;82</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> */</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;83</td> <td class="nbHitsCovered">&nbsp;1</td> <td class="src"><pre class="src">&nbsp; <span class="keyword">private</span> <span class="keyword">static</span> <span class="keyword">final</span> Logger LOGGER = LoggerFactory.getLogger(Engine.<span class="keyword">class</span>);</pre></td></tr>
<tr> <td class="numLine">&nbsp;84</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;</pre></td></tr>
<tr> <td class="numLine">&nbsp;85</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; <span class="comment">/**</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;86</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> * Creates a new Engine.</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;87</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> *</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;88</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> * @throws DatabaseException thrown if there is an error connecting to the</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;89</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> * database</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;90</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> */</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;91</td> <td class="nbHitsCovered">&nbsp;4</td> <td class="src"><pre class="src">&nbsp; <span class="keyword">public</span> Engine() <span class="keyword">throws</span> DatabaseException {</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;92</td> <td class="nbHitsCovered">&nbsp;4</td> <td class="src"><pre class="src">&nbsp; initializeEngine();</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;93</td> <td class="nbHitsCovered">&nbsp;4</td> <td class="src"><pre class="src">&nbsp; }</pre></td></tr>
<tr> <td class="numLine">&nbsp;94</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;</pre></td></tr>
<tr> <td class="numLine">&nbsp;95</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; <span class="comment">/**</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;96</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> * Creates a new Engine.</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;97</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> *</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;98</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> * @param serviceClassLoader a reference the class loader being used</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;99</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> * @throws DatabaseException thrown if there is an error connecting to the</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;100</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> * database</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;101</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> */</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;102</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; <span class="keyword">public</span> Engine(ClassLoader serviceClassLoader) <span class="keyword">throws</span> DatabaseException {</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;103</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; <span class="keyword">this</span>.serviceClassLoader = serviceClassLoader;</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;104</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; initializeEngine();</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;105</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; }</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;106</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;</pre></td></tr>
<tr> <td class="numLine">&nbsp;107</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; <span class="comment">/**</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;108</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> * Creates a new Engine using the specified classloader to dynamically load</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;109</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> * Analyzer and Update services.</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;110</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> *</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;111</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> * @throws DatabaseException thrown if there is an error connecting to the</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;112</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> * database</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;113</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> */</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;114</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; <span class="keyword">protected</span> <span class="keyword">final</span> <span class="keyword">void</span> initializeEngine() <span class="keyword">throws</span> DatabaseException {</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;115</td> <td class="nbHitsCovered">&nbsp;4</td> <td class="src"><pre class="src">&nbsp; ConnectionFactory.initialize();</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;116</td> <td class="nbHitsCovered">&nbsp;4</td> <td class="src"><pre class="src">&nbsp; loadAnalyzers();</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;117</td> <td class="nbHitsCovered">&nbsp;4</td> <td class="src"><pre class="src">&nbsp; }</pre></td></tr>
<tr> <td class="numLine">&nbsp;118</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;</pre></td></tr>
<tr> <td class="numLine">&nbsp;119</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; <span class="comment">/**</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;120</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> * Properly cleans up resources allocated during analysis.</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;121</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> */</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;122</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; <span class="keyword">public</span> <span class="keyword">void</span> cleanup() {</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;123</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; ConnectionFactory.cleanup();</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;124</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; }</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;125</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;</pre></td></tr>
<tr> <td class="numLine">&nbsp;126</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; <span class="comment">/**</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;127</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> * Loads the analyzers specified in the configuration file (or system</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;128</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> * properties).</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;129</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> */</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;130</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; <span class="keyword">private</span> <span class="keyword">void</span> loadAnalyzers() {</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;131</td> <td class="nbHitsUncovered"><a title="Line 131: Conditional coverage 50% (1/2).">&nbsp;4</a></td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp;<a title="Line 131: Conditional coverage 50% (1/2)."> <span class="keyword">if</span> (!analyzers.isEmpty()) {</a></span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;132</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; <span class="keyword">return</span>;</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;133</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; }</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;134</td> <td class="nbHitsCovered"><a title="Line 134: Conditional coverage 100% (2/2).">&nbsp;44</a></td> <td class="src"><pre class="src">&nbsp;<a title="Line 134: Conditional coverage 100% (2/2)."> <span class="keyword">for</span> (AnalysisPhase phase : AnalysisPhase.values()) {</a></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;135</td> <td class="nbHitsCovered">&nbsp;40</td> <td class="src"><pre class="src">&nbsp; analyzers.put(phase, <span class="keyword">new</span> ArrayList&lt;Analyzer&gt;());</pre></td></tr>
<tr> <td class="numLine">&nbsp;136</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; }</pre></td></tr>
<tr> <td class="numLine">&nbsp;137</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;138</td> <td class="nbHitsCovered">&nbsp;4</td> <td class="src"><pre class="src">&nbsp; <span class="keyword">final</span> AnalyzerService service = <span class="keyword">new</span> AnalyzerService(serviceClassLoader);</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;139</td> <td class="nbHitsCovered">&nbsp;4</td> <td class="src"><pre class="src">&nbsp; <span class="keyword">final</span> List&lt;Analyzer&gt; iterator = service.getAnalyzers();</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;140</td> <td class="nbHitsCovered"><a title="Line 140: Conditional coverage 100% (2/2).">&nbsp;4</a></td> <td class="src"><pre class="src">&nbsp;<a title="Line 140: Conditional coverage 100% (2/2)."> <span class="keyword">for</span> (Analyzer a : iterator) {</a></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;141</td> <td class="nbHitsCovered">&nbsp;104</td> <td class="src"><pre class="src">&nbsp; analyzers.get(a.getAnalysisPhase()).add(a);</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;142</td> <td class="nbHitsCovered"><a title="Line 142: Conditional coverage 100% (2/2).">&nbsp;104</a></td> <td class="src"><pre class="src">&nbsp;<a title="Line 142: Conditional coverage 100% (2/2)."> <span class="keyword">if</span> (a <span class="keyword">instanceof</span> FileTypeAnalyzer) {</a></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;143</td> <td class="nbHitsCovered">&nbsp;72</td> <td class="src"><pre class="src">&nbsp; <span class="keyword">this</span>.fileTypeAnalyzers.add((FileTypeAnalyzer) a);</pre></td></tr>
<tr> <td class="numLine">&nbsp;144</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; }</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;145</td> <td class="nbHitsCovered">&nbsp;104</td> <td class="src"><pre class="src">&nbsp; }</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;146</td> <td class="nbHitsCovered">&nbsp;4</td> <td class="src"><pre class="src">&nbsp; }</pre></td></tr>
<tr> <td class="numLine">&nbsp;147</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;</pre></td></tr>
<tr> <td class="numLine">&nbsp;148</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; <span class="comment">/**</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;149</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> * Get the List of the analyzers for a specific phase of analysis.</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;150</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> *</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;151</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> * @param phase the phase to get the configured analyzers.</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;152</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> * @return the analyzers loaded</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;153</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> */</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;154</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; <span class="keyword">public</span> List&lt;Analyzer&gt; getAnalyzers(AnalysisPhase phase) {</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;155</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; <span class="keyword">return</span> analyzers.get(phase);</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;156</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; }</pre></td></tr>
<tr> <td class="numLine">&nbsp;157</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;</pre></td></tr>
<tr> <td class="numLine">&nbsp;158</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; <span class="comment">/**</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;159</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> * Get the dependencies identified.</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;160</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> *</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;161</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> * @return the dependencies identified</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;162</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> */</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;163</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; <span class="keyword">public</span> List&lt;Dependency&gt; getDependencies() {</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;164</td> <td class="nbHitsCovered">&nbsp;48</td> <td class="src"><pre class="src">&nbsp; <span class="keyword">return</span> dependencies;</pre></td></tr>
<tr> <td class="numLine">&nbsp;165</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; }</pre></td></tr>
<tr> <td class="numLine">&nbsp;166</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;</pre></td></tr>
<tr> <td class="numLine">&nbsp;167</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; <span class="comment">/**</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;168</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> * Sets the dependencies.</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;169</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> *</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;170</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> * @param dependencies the dependencies</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;171</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> */</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;172</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; <span class="keyword">public</span> <span class="keyword">void</span> setDependencies(List&lt;Dependency&gt; dependencies) {</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;173</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; <span class="keyword">this</span>.dependencies = dependencies;</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;174</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; }</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;175</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;</pre></td></tr>
<tr> <td class="numLine">&nbsp;176</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; <span class="comment">/**</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;177</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> * Scans an array of files or directories. If a directory is specified, it</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;178</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> * will be scanned recursively. Any dependencies identified are added to the</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;179</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> * dependency collection.</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;180</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> *</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;181</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> * @param paths an array of paths to files or directories to be analyzed</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;182</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> * @return the list of dependencies scanned</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;183</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> * @since v0.3.2.5</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;184</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> */</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;185</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; <span class="keyword">public</span> List&lt;Dependency&gt; scan(String[] paths) {</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;186</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; <span class="keyword">final</span> List&lt;Dependency&gt; deps = <span class="keyword">new</span> ArrayList&lt;Dependency&gt;();</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;187</td> <td class="nbHitsUncovered"><a title="Line 187: Conditional coverage 0% (0/2).">&nbsp;0</a></td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp;<a title="Line 187: Conditional coverage 0% (0/2)."> <span class="keyword">for</span> (String path : paths) {</a></span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;188</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; <span class="keyword">final</span> List&lt;Dependency&gt; d = scan(path);</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;189</td> <td class="nbHitsUncovered"><a title="Line 189: Conditional coverage 0% (0/2).">&nbsp;0</a></td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp;<a title="Line 189: Conditional coverage 0% (0/2)."> <span class="keyword">if</span> (d != <span class="keyword">null</span>) {</a></span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;190</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; deps.addAll(d);</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;191</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; }</pre></td></tr>
<tr> <td class="numLine">&nbsp;192</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; }</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;193</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; <span class="keyword">return</span> deps;</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;194</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; }</pre></td></tr>
<tr> <td class="numLine">&nbsp;195</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;</pre></td></tr>
<tr> <td class="numLine">&nbsp;196</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; <span class="comment">/**</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;197</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> * Scans a given file or directory. If a directory is specified, it will be</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;198</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> * scanned recursively. Any dependencies identified are added to the</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;199</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> * dependency collection.</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;200</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> *</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;201</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> * @param path the path to a file or directory to be analyzed</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;202</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> * @return the list of dependencies scanned</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;203</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> */</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;204</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; <span class="keyword">public</span> List&lt;Dependency&gt; scan(String path) {</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;205</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; <span class="keyword">final</span> File file = <span class="keyword">new</span> File(path);</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;206</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; <span class="keyword">return</span> scan(file);</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;207</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; }</pre></td></tr>
<tr> <td class="numLine">&nbsp;208</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;</pre></td></tr>
<tr> <td class="numLine">&nbsp;209</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; <span class="comment">/**</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;210</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> * Scans an array of files or directories. If a directory is specified, it</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;211</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> * will be scanned recursively. Any dependencies identified are added to the</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;212</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> * dependency collection.</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;213</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> *</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;214</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> * @param files an array of paths to files or directories to be analyzed.</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;215</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> * @return the list of dependencies</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;216</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> * @since v0.3.2.5</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;217</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> */</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;218</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; <span class="keyword">public</span> List&lt;Dependency&gt; scan(File[] files) {</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;219</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; <span class="keyword">final</span> List&lt;Dependency&gt; deps = <span class="keyword">new</span> ArrayList&lt;Dependency&gt;();</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;220</td> <td class="nbHitsUncovered"><a title="Line 220: Conditional coverage 0% (0/2).">&nbsp;0</a></td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp;<a title="Line 220: Conditional coverage 0% (0/2)."> <span class="keyword">for</span> (File file : files) {</a></span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;221</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; <span class="keyword">final</span> List&lt;Dependency&gt; d = scan(file);</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;222</td> <td class="nbHitsUncovered"><a title="Line 222: Conditional coverage 0% (0/2).">&nbsp;0</a></td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp;<a title="Line 222: Conditional coverage 0% (0/2)."> <span class="keyword">if</span> (d != <span class="keyword">null</span>) {</a></span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;223</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; deps.addAll(d);</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;224</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; }</pre></td></tr>
<tr> <td class="numLine">&nbsp;225</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; }</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;226</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; <span class="keyword">return</span> deps;</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;227</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; }</pre></td></tr>
<tr> <td class="numLine">&nbsp;228</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;</pre></td></tr>
<tr> <td class="numLine">&nbsp;229</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; <span class="comment">/**</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;230</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> * Scans a collection of files or directories. If a directory is specified,</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;231</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> * it will be scanned recursively. Any dependencies identified are added to</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;232</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> * the dependency collection.</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;233</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> *</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;234</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> * @param files a set of paths to files or directories to be analyzed</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;235</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> * @return the list of dependencies scanned</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;236</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> * @since v0.3.2.5</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;237</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> */</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;238</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; <span class="keyword">public</span> List&lt;Dependency&gt; scan(Collection&lt;File&gt; files) {</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;239</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; <span class="keyword">final</span> List&lt;Dependency&gt; deps = <span class="keyword">new</span> ArrayList&lt;Dependency&gt;();</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;240</td> <td class="nbHitsUncovered"><a title="Line 240: Conditional coverage 0% (0/2).">&nbsp;0</a></td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp;<a title="Line 240: Conditional coverage 0% (0/2)."> <span class="keyword">for</span> (File file : files) {</a></span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;241</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; <span class="keyword">final</span> List&lt;Dependency&gt; d = scan(file);</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;242</td> <td class="nbHitsUncovered"><a title="Line 242: Conditional coverage 0% (0/2).">&nbsp;0</a></td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp;<a title="Line 242: Conditional coverage 0% (0/2)."> <span class="keyword">if</span> (d != <span class="keyword">null</span>) {</a></span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;243</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; deps.addAll(d);</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;244</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; }</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;245</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; }</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;246</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; <span class="keyword">return</span> deps;</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;247</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; }</pre></td></tr>
<tr> <td class="numLine">&nbsp;248</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;</pre></td></tr>
<tr> <td class="numLine">&nbsp;249</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; <span class="comment">/**</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;250</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> * Scans a given file or directory. If a directory is specified, it will be</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;251</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> * scanned recursively. Any dependencies identified are added to the</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;252</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> * dependency collection.</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;253</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> *</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;254</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> * @param file the path to a file or directory to be analyzed</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;255</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> * @return the list of dependencies scanned</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;256</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> * @since v0.3.2.4</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;257</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> */</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;258</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; <span class="keyword">public</span> List&lt;Dependency&gt; scan(File file) {</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;259</td> <td class="nbHitsUncovered"><a title="Line 259: Conditional coverage 50% (1/2).">&nbsp;5</a></td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp;<a title="Line 259: Conditional coverage 50% (1/2)."> <span class="keyword">if</span> (file.exists()) {</a></span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;260</td> <td class="nbHitsCovered"><a title="Line 260: Conditional coverage 100% (2/2).">&nbsp;5</a></td> <td class="src"><pre class="src">&nbsp;<a title="Line 260: Conditional coverage 100% (2/2)."> <span class="keyword">if</span> (file.isDirectory()) {</a></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;261</td> <td class="nbHitsCovered">&nbsp;3</td> <td class="src"><pre class="src">&nbsp; <span class="keyword">return</span> scanDirectory(file);</pre></td></tr>
<tr> <td class="numLine">&nbsp;262</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; } <span class="keyword">else</span> {</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;263</td> <td class="nbHitsCovered">&nbsp;2</td> <td class="src"><pre class="src">&nbsp; <span class="keyword">final</span> Dependency d = scanFile(file);</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;264</td> <td class="nbHitsUncovered"><a title="Line 264: Conditional coverage 50% (1/2).">&nbsp;2</a></td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp;<a title="Line 264: Conditional coverage 50% (1/2)."> <span class="keyword">if</span> (d != <span class="keyword">null</span>) {</a></span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;265</td> <td class="nbHitsCovered">&nbsp;2</td> <td class="src"><pre class="src">&nbsp; <span class="keyword">final</span> List&lt;Dependency&gt; deps = <span class="keyword">new</span> ArrayList&lt;Dependency&gt;();</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;266</td> <td class="nbHitsCovered">&nbsp;2</td> <td class="src"><pre class="src">&nbsp; deps.add(d);</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;267</td> <td class="nbHitsCovered">&nbsp;2</td> <td class="src"><pre class="src">&nbsp; <span class="keyword">return</span> deps;</pre></td></tr>
<tr> <td class="numLine">&nbsp;268</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; }</pre></td></tr>
<tr> <td class="numLine">&nbsp;269</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; }</pre></td></tr>
<tr> <td class="numLine">&nbsp;270</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; }</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;271</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; <span class="keyword">return</span> <span class="keyword">null</span>;</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;272</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; }</pre></td></tr>
<tr> <td class="numLine">&nbsp;273</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;</pre></td></tr>
<tr> <td class="numLine">&nbsp;274</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; <span class="comment">/**</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;275</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> * Recursively scans files and directories. Any dependencies identified are</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;276</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> * added to the dependency collection.</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;277</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> *</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;278</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> * @param dir the directory to scan</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;279</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> * @return the list of Dependency objects scanned</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;280</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> */</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;281</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; <span class="keyword">protected</span> List&lt;Dependency&gt; scanDirectory(File dir) {</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;282</td> <td class="nbHitsCovered">&nbsp;46</td> <td class="src"><pre class="src">&nbsp; <span class="keyword">final</span> File[] files = dir.listFiles();</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;283</td> <td class="nbHitsCovered">&nbsp;46</td> <td class="src"><pre class="src">&nbsp; <span class="keyword">final</span> List&lt;Dependency&gt; deps = <span class="keyword">new</span> ArrayList&lt;Dependency&gt;();</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;284</td> <td class="nbHitsUncovered"><a title="Line 284: Conditional coverage 50% (1/2).">&nbsp;46</a></td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp;<a title="Line 284: Conditional coverage 50% (1/2)."> <span class="keyword">if</span> (files != <span class="keyword">null</span>) {</a></span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;285</td> <td class="nbHitsCovered"><a title="Line 285: Conditional coverage 100% (2/2).">&nbsp;93</a></td> <td class="src"><pre class="src">&nbsp;<a title="Line 285: Conditional coverage 100% (2/2)."> <span class="keyword">for</span> (File f : files) {</a></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;286</td> <td class="nbHitsCovered"><a title="Line 286: Conditional coverage 100% (2/2).">&nbsp;47</a></td> <td class="src"><pre class="src">&nbsp;<a title="Line 286: Conditional coverage 100% (2/2)."> <span class="keyword">if</span> (f.isDirectory()) {</a></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;287</td> <td class="nbHitsCovered">&nbsp;43</td> <td class="src"><pre class="src">&nbsp; <span class="keyword">final</span> List&lt;Dependency&gt; d = scanDirectory(f);</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;288</td> <td class="nbHitsUncovered"><a title="Line 288: Conditional coverage 50% (1/2).">&nbsp;43</a></td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp;<a title="Line 288: Conditional coverage 50% (1/2)."> <span class="keyword">if</span> (d != <span class="keyword">null</span>) {</a></span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;289</td> <td class="nbHitsCovered">&nbsp;43</td> <td class="src"><pre class="src">&nbsp; deps.addAll(d);</pre></td></tr>
<tr> <td class="numLine">&nbsp;290</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; }</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;291</td> <td class="nbHitsCovered">&nbsp;43</td> <td class="src"><pre class="src">&nbsp; } <span class="keyword">else</span> {</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;292</td> <td class="nbHitsCovered">&nbsp;4</td> <td class="src"><pre class="src">&nbsp; <span class="keyword">final</span> Dependency d = scanFile(f);</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;293</td> <td class="nbHitsCovered">&nbsp;4</td> <td class="src"><pre class="src">&nbsp; deps.add(d);</pre></td></tr>
<tr> <td class="numLine">&nbsp;294</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; }</pre></td></tr>
<tr> <td class="numLine">&nbsp;295</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; }</pre></td></tr>
<tr> <td class="numLine">&nbsp;296</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; }</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;297</td> <td class="nbHitsCovered">&nbsp;46</td> <td class="src"><pre class="src">&nbsp; <span class="keyword">return</span> deps;</pre></td></tr>
<tr> <td class="numLine">&nbsp;298</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; }</pre></td></tr>
<tr> <td class="numLine">&nbsp;299</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;</pre></td></tr>
<tr> <td class="numLine">&nbsp;300</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; <span class="comment">/**</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;301</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> * Scans a specified file. If a dependency is identified it is added to the</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;302</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> * dependency collection.</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;303</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> *</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;304</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> * @param file The file to scan</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;305</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> * @return the scanned dependency</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;306</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> */</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;307</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; <span class="keyword">protected</span> Dependency scanFile(File file) {</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;308</td> <td class="nbHitsCovered">&nbsp;6</td> <td class="src"><pre class="src">&nbsp; Dependency dependency = <span class="keyword">null</span>;</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;309</td> <td class="nbHitsUncovered"><a title="Line 309: Conditional coverage 50% (1/2).">&nbsp;6</a></td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp;<a title="Line 309: Conditional coverage 50% (1/2)."> <span class="keyword">if</span> (file.isFile()) {</a></span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;310</td> <td class="nbHitsCovered"><a title="Line 310: Conditional coverage 100% (2/2).">&nbsp;6</a></td> <td class="src"><pre class="src">&nbsp;<a title="Line 310: Conditional coverage 100% (2/2)."> <span class="keyword">if</span> (accept(file)) {</a></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;311</td> <td class="nbHitsCovered">&nbsp;4</td> <td class="src"><pre class="src">&nbsp; dependency = <span class="keyword">new</span> Dependency(file);</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;312</td> <td class="nbHitsCovered">&nbsp;4</td> <td class="src"><pre class="src">&nbsp; dependencies.add(dependency);</pre></td></tr>
<tr> <td class="numLine">&nbsp;313</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; }</pre></td></tr>
<tr> <td class="numLine">&nbsp;314</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; } <span class="keyword">else</span> {</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;315</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; LOGGER.debug(<span class="string">"Path passed to scanFile(File) is not a file: {}. Skipping the file."</span>, file);</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;316</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; }</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;317</td> <td class="nbHitsCovered">&nbsp;6</td> <td class="src"><pre class="src">&nbsp; <span class="keyword">return</span> dependency;</pre></td></tr>
<tr> <td class="numLine">&nbsp;318</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; }</pre></td></tr>
<tr> <td class="numLine">&nbsp;319</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;</pre></td></tr>
<tr> <td class="numLine">&nbsp;320</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; <span class="comment">/**</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;321</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> * Runs the analyzers against all of the dependencies. Since the mutable</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;322</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> * dependencies list is exposed via {@link #getDependencies()}, this method</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;323</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> * iterates over a copy of the dependencies list. Thus, the potential for</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;324</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> * {@link java.util.ConcurrentModificationException}s is avoided, and</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;325</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> * analyzers may safely add or remove entries from the dependencies list.</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;326</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> *</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;327</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> * Every effort is made to complete analysis on the dependencies. In some</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;328</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> * cases an exception will occur with part of the analysis being performed</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;329</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> * which may not affect the entire analysis. If an exception occurs it will</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;330</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> * be included in the thrown exception collection.</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;331</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> *</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;332</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> * @throws ExceptionCollection a collections of any exceptions that occurred</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;333</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> * during analysis</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;334</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> */</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;335</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; <span class="keyword">public</span> <span class="keyword">void</span> analyzeDependencies() <span class="keyword">throws</span> ExceptionCollection {</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;336</td> <td class="nbHitsCovered">&nbsp;2</td> <td class="src"><pre class="src">&nbsp; <span class="keyword">final</span> List&lt;Throwable&gt; exceptions = <span class="keyword">new</span> ArrayList&lt;Throwable&gt;();</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;337</td> <td class="nbHitsCovered">&nbsp;2</td> <td class="src"><pre class="src">&nbsp; <span class="keyword">boolean</span> autoUpdate = <span class="keyword">true</span>;</pre></td></tr>
<tr> <td class="numLine">&nbsp;338</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; <span class="keyword">try</span> {</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;339</td> <td class="nbHitsCovered">&nbsp;2</td> <td class="src"><pre class="src">&nbsp; autoUpdate = Settings.getBoolean(Settings.KEYS.AUTO_UPDATE);</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;340</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; } <span class="keyword">catch</span> (InvalidSettingException ex) {</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;341</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; LOGGER.debug(<span class="string">"Invalid setting for auto-update; using true."</span>);</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;342</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; exceptions.add(ex);</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;343</td> <td class="nbHitsCovered">&nbsp;2</td> <td class="src"><pre class="src">&nbsp; }</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;344</td> <td class="nbHitsUncovered"><a title="Line 344: Conditional coverage 50% (1/2).">&nbsp;2</a></td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp;<a title="Line 344: Conditional coverage 50% (1/2)."> <span class="keyword">if</span> (autoUpdate) {</a></span></pre></td></tr>
<tr> <td class="numLine">&nbsp;345</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; <span class="keyword">try</span> {</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;346</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; doUpdates();</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;347</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; } <span class="keyword">catch</span> (UpdateException ex) {</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;348</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; exceptions.add(ex);</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;349</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; LOGGER.warn(<span class="string">"Unable to update Cached Web DataSource, using local "</span></span></pre></td></tr>
<tr> <td class="numLine">&nbsp;350</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; + <span class="string">"data instead. Results may not include recent vulnerabilities."</span>);</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;351</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; LOGGER.debug(<span class="string">"Update Error"</span>, ex);</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;352</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; }</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;353</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; }</pre></td></tr>
<tr> <td class="numLine">&nbsp;354</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;</pre></td></tr>
<tr> <td class="numLine">&nbsp;355</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; <span class="comment">//need to ensure that data exists</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;356</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; <span class="keyword">try</span> {</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;357</td> <td class="nbHitsCovered">&nbsp;2</td> <td class="src"><pre class="src">&nbsp; ensureDataExists();</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;358</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; } <span class="keyword">catch</span> (NoDataException ex) {</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;359</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; LOGGER.error(<span class="string">"{}\n\nUnable to continue dependency-check analysis."</span>, ex.getMessage());</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;360</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; LOGGER.debug(<span class="string">""</span>, ex);</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;361</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; exceptions.add(ex);</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;362</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; <span class="keyword">throw</span> <span class="keyword">new</span> ExceptionCollection(<span class="string">"Unable to continue dependency-check analysis."</span>, exceptions, <span class="keyword">true</span>);</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;363</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; } <span class="keyword">catch</span> (DatabaseException ex) {</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;364</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; LOGGER.error(<span class="string">"{}\n\nUnable to continue dependency-check analysis."</span>, ex.getMessage());</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;365</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; LOGGER.debug(<span class="string">""</span>, ex);</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;366</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; exceptions.add(ex);</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;367</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; <span class="keyword">throw</span> <span class="keyword">new</span> ExceptionCollection(<span class="string">"Unable to connect to the dependency-check database"</span>, exceptions, <span class="keyword">true</span>);</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;368</td> <td class="nbHitsCovered">&nbsp;2</td> <td class="src"><pre class="src">&nbsp; }</pre></td></tr>
<tr> <td class="numLine">&nbsp;369</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;370</td> <td class="nbHitsCovered">&nbsp;2</td> <td class="src"><pre class="src">&nbsp; LOGGER.debug(<span class="string">"\n----------------------------------------------------\nBEGIN ANALYSIS\n----------------------------------------------------"</span>);</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;371</td> <td class="nbHitsCovered">&nbsp;2</td> <td class="src"><pre class="src">&nbsp; LOGGER.info(<span class="string">"Analysis Started"</span>);</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;372</td> <td class="nbHitsCovered">&nbsp;2</td> <td class="src"><pre class="src">&nbsp; <span class="keyword">final</span> <span class="keyword">long</span> analysisStart = System.currentTimeMillis();</pre></td></tr>
<tr> <td class="numLine">&nbsp;373</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;</pre></td></tr>
<tr> <td class="numLine">&nbsp;374</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; <span class="comment">// analysis phases</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;375</td> <td class="nbHitsCovered"><a title="Line 375: Conditional coverage 100% (2/2).">&nbsp;22</a></td> <td class="src"><pre class="src">&nbsp;<a title="Line 375: Conditional coverage 100% (2/2)."> <span class="keyword">for</span> (AnalysisPhase phase : AnalysisPhase.values()) {</a></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;376</td> <td class="nbHitsCovered">&nbsp;20</td> <td class="src"><pre class="src">&nbsp; <span class="keyword">final</span> List&lt;Analyzer&gt; analyzerList = analyzers.get(phase);</pre></td></tr>
<tr> <td class="numLine">&nbsp;377</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;378</td> <td class="nbHitsCovered"><a title="Line 378: Conditional coverage 100% (2/2).">&nbsp;20</a></td> <td class="src"><pre class="src">&nbsp;<a title="Line 378: Conditional coverage 100% (2/2)."> <span class="keyword">for</span> (Analyzer a : analyzerList) {</a></pre></td></tr>
<tr> <td class="numLine">&nbsp;379</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; <span class="keyword">try</span> {</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;380</td> <td class="nbHitsCovered">&nbsp;52</td> <td class="src"><pre class="src">&nbsp; a = initializeAnalyzer(a);</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;381</td> <td class="nbHitsCovered">&nbsp;1</td> <td class="src"><pre class="src">&nbsp; } <span class="keyword">catch</span> (InitializationException ex) {</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;382</td> <td class="nbHitsCovered">&nbsp;1</td> <td class="src"><pre class="src">&nbsp; exceptions.add(ex);</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;383</td> <td class="nbHitsCovered">&nbsp;1</td> <td class="src"><pre class="src">&nbsp; <span class="keyword">continue</span>;</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;384</td> <td class="nbHitsCovered">&nbsp;51</td> <td class="src"><pre class="src">&nbsp; }</pre></td></tr>
<tr> <td class="numLine">&nbsp;385</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;</pre></td></tr>
<tr> <td class="numLine">&nbsp;386</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; <span class="comment">/* need to create a copy of the collection because some of the</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;387</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> * analyzers may modify it. This prevents ConcurrentModificationExceptions.</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;388</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> * This is okay for adds/deletes because it happens per analyzer.</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;389</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> */</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;390</td> <td class="nbHitsCovered">&nbsp;51</td> <td class="src"><pre class="src">&nbsp; LOGGER.debug(<span class="string">"Begin Analyzer '{}'"</span>, a.getName());</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;391</td> <td class="nbHitsCovered">&nbsp;51</td> <td class="src"><pre class="src">&nbsp; <span class="keyword">final</span> Set&lt;Dependency&gt; dependencySet = <span class="keyword">new</span> HashSet&lt;Dependency&gt;(dependencies);</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;392</td> <td class="nbHitsCovered"><a title="Line 392: Conditional coverage 100% (2/2).">&nbsp;51</a></td> <td class="src"><pre class="src">&nbsp;<a title="Line 392: Conditional coverage 100% (2/2)."> <span class="keyword">for</span> (Dependency d : dependencySet) {</a></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;393</td> <td class="nbHitsCovered">&nbsp;102</td> <td class="src"><pre class="src">&nbsp; <span class="keyword">boolean</span> shouldAnalyze = <span class="keyword">true</span>;</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;394</td> <td class="nbHitsCovered"><a title="Line 394: Conditional coverage 100% (2/2).">&nbsp;102</a></td> <td class="src"><pre class="src">&nbsp;<a title="Line 394: Conditional coverage 100% (2/2)."> <span class="keyword">if</span> (a <span class="keyword">instanceof</span> FileTypeAnalyzer) {</a></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;395</td> <td class="nbHitsCovered">&nbsp;70</td> <td class="src"><pre class="src">&nbsp; <span class="keyword">final</span> FileTypeAnalyzer fAnalyzer = (FileTypeAnalyzer) a;</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;396</td> <td class="nbHitsCovered">&nbsp;70</td> <td class="src"><pre class="src">&nbsp; shouldAnalyze = fAnalyzer.accept(d.getActualFile());</pre></td></tr>
<tr> <td class="numLine">&nbsp;397</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; }</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;398</td> <td class="nbHitsCovered"><a title="Line 398: Conditional coverage 100% (2/2).">&nbsp;102</a></td> <td class="src"><pre class="src">&nbsp;<a title="Line 398: Conditional coverage 100% (2/2)."> <span class="keyword">if</span> (shouldAnalyze) {</a></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;399</td> <td class="nbHitsCovered">&nbsp;38</td> <td class="src"><pre class="src">&nbsp; LOGGER.debug(<span class="string">"Begin Analysis of '{}'"</span>, d.getActualFilePath());</pre></td></tr>
<tr> <td class="numLine">&nbsp;400</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; <span class="keyword">try</span> {</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;401</td> <td class="nbHitsCovered">&nbsp;38</td> <td class="src"><pre class="src">&nbsp; a.analyze(d, <span class="keyword">this</span>);</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;402</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; } <span class="keyword">catch</span> (AnalysisException ex) {</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;403</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; LOGGER.warn(<span class="string">"An error occurred while analyzing '{}'."</span>, d.getActualFilePath());</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;404</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; LOGGER.debug(<span class="string">""</span>, ex);</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;405</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; exceptions.add(ex);</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;406</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; } <span class="keyword">catch</span> (Throwable ex) {</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;407</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; <span class="comment">//final AnalysisException ax = new AnalysisException(axMsg, ex);</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;408</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; LOGGER.warn(<span class="string">"An unexpected error occurred during analysis of '{}'"</span>, d.getActualFilePath());</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;409</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; LOGGER.debug(<span class="string">""</span>, ex);</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;410</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; exceptions.add(ex);</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;411</td> <td class="nbHitsCovered">&nbsp;38</td> <td class="src"><pre class="src">&nbsp; }</pre></td></tr>
<tr> <td class="numLine">&nbsp;412</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; }</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;413</td> <td class="nbHitsCovered">&nbsp;102</td> <td class="src"><pre class="src">&nbsp; }</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;414</td> <td class="nbHitsCovered">&nbsp;51</td> <td class="src"><pre class="src">&nbsp; }</pre></td></tr>
<tr> <td class="numLine">&nbsp;415</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; }</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;416</td> <td class="nbHitsCovered"><a title="Line 416: Conditional coverage 100% (2/2).">&nbsp;22</a></td> <td class="src"><pre class="src">&nbsp;<a title="Line 416: Conditional coverage 100% (2/2)."> <span class="keyword">for</span> (AnalysisPhase phase : AnalysisPhase.values()) {</a></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;417</td> <td class="nbHitsCovered">&nbsp;20</td> <td class="src"><pre class="src">&nbsp; <span class="keyword">final</span> List&lt;Analyzer&gt; analyzerList = analyzers.get(phase);</pre></td></tr>
<tr> <td class="numLine">&nbsp;418</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;419</td> <td class="nbHitsCovered"><a title="Line 419: Conditional coverage 100% (2/2).">&nbsp;20</a></td> <td class="src"><pre class="src">&nbsp;<a title="Line 419: Conditional coverage 100% (2/2)."> <span class="keyword">for</span> (Analyzer a : analyzerList) {</a></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;420</td> <td class="nbHitsCovered">&nbsp;52</td> <td class="src"><pre class="src">&nbsp; closeAnalyzer(a);</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;421</td> <td class="nbHitsCovered">&nbsp;52</td> <td class="src"><pre class="src">&nbsp; }</pre></td></tr>
<tr> <td class="numLine">&nbsp;422</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; }</pre></td></tr>
<tr> <td class="numLine">&nbsp;423</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;424</td> <td class="nbHitsCovered">&nbsp;2</td> <td class="src"><pre class="src">&nbsp; LOGGER.debug(<span class="string">"\n----------------------------------------------------\nEND ANALYSIS\n----------------------------------------------------"</span>);</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;425</td> <td class="nbHitsCovered">&nbsp;2</td> <td class="src"><pre class="src">&nbsp; LOGGER.info(<span class="string">"Analysis Complete ({} ms)"</span>, System.currentTimeMillis() - analysisStart);</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;426</td> <td class="nbHitsCovered"><a title="Line 426: Conditional coverage 100% (2/2).">&nbsp;2</a></td> <td class="src"><pre class="src">&nbsp;<a title="Line 426: Conditional coverage 100% (2/2)."> <span class="keyword">if</span> (exceptions.size() &gt; 0) {</a></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;427</td> <td class="nbHitsCovered">&nbsp;1</td> <td class="src"><pre class="src">&nbsp; <span class="keyword">throw</span> <span class="keyword">new</span> ExceptionCollection(<span class="string">"One or more exceptions occured during dependency-check analysis"</span>, exceptions);</pre></td></tr>
<tr> <td class="numLine">&nbsp;428</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; }</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;429</td> <td class="nbHitsCovered">&nbsp;1</td> <td class="src"><pre class="src">&nbsp; }</pre></td></tr>
<tr> <td class="numLine">&nbsp;430</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;</pre></td></tr>
<tr> <td class="numLine">&nbsp;431</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; <span class="comment">/**</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;432</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> * Initializes the given analyzer.</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;433</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> *</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;434</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> * @param analyzer the analyzer to initialize</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;435</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> * @return the initialized analyzer</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;436</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> * @throws InitializationException thrown when there is a problem</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;437</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> * initializing the analyzer</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;438</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> */</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;439</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; <span class="keyword">protected</span> Analyzer initializeAnalyzer(Analyzer analyzer) <span class="keyword">throws</span> InitializationException {</pre></td></tr>
<tr> <td class="numLine">&nbsp;440</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; <span class="keyword">try</span> {</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;441</td> <td class="nbHitsCovered">&nbsp;52</td> <td class="src"><pre class="src">&nbsp; LOGGER.debug(<span class="string">"Initializing {}"</span>, analyzer.getName());</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;442</td> <td class="nbHitsCovered">&nbsp;52</td> <td class="src"><pre class="src">&nbsp; analyzer.initialize();</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;443</td> <td class="nbHitsCovered">&nbsp;1</td> <td class="src"><pre class="src">&nbsp; } <span class="keyword">catch</span> (InitializationException ex) {</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;444</td> <td class="nbHitsCovered">&nbsp;1</td> <td class="src"><pre class="src">&nbsp; LOGGER.error(<span class="string">"Exception occurred initializing {}."</span>, analyzer.getName());</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;445</td> <td class="nbHitsCovered">&nbsp;1</td> <td class="src"><pre class="src">&nbsp; LOGGER.debug(<span class="string">""</span>, ex);</pre></td></tr>
<tr> <td class="numLine">&nbsp;446</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; <span class="keyword">try</span> {</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;447</td> <td class="nbHitsCovered">&nbsp;1</td> <td class="src"><pre class="src">&nbsp; analyzer.close();</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;448</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; } <span class="keyword">catch</span> (Throwable ex1) {</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;449</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; LOGGER.trace(<span class="string">""</span>, ex1);</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;450</td> <td class="nbHitsCovered">&nbsp;1</td> <td class="src"><pre class="src">&nbsp; }</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;451</td> <td class="nbHitsCovered">&nbsp;1</td> <td class="src"><pre class="src">&nbsp; <span class="keyword">throw</span> ex;</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;452</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; } <span class="keyword">catch</span> (Throwable ex) {</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;453</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; LOGGER.error(<span class="string">"Unexpected exception occurred initializing {}."</span>, analyzer.getName());</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;454</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; LOGGER.debug(<span class="string">""</span>, ex);</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;455</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; <span class="keyword">try</span> {</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;456</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; analyzer.close();</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;457</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; } <span class="keyword">catch</span> (Throwable ex1) {</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;458</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; LOGGER.trace(<span class="string">""</span>, ex1);</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;459</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; }</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;460</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; <span class="keyword">throw</span> <span class="keyword">new</span> InitializationException(<span class="string">"Unexpected Exception"</span>, ex);</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;461</td> <td class="nbHitsCovered">&nbsp;51</td> <td class="src"><pre class="src">&nbsp; }</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;462</td> <td class="nbHitsCovered">&nbsp;51</td> <td class="src"><pre class="src">&nbsp; <span class="keyword">return</span> analyzer;</pre></td></tr>
<tr> <td class="numLine">&nbsp;463</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; }</pre></td></tr>
<tr> <td class="numLine">&nbsp;464</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;</pre></td></tr>
<tr> <td class="numLine">&nbsp;465</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; <span class="comment">/**</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;466</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> * Closes the given analyzer.</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;467</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> *</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;468</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> * @param analyzer the analyzer to close</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;469</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> */</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;470</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; <span class="keyword">protected</span> <span class="keyword">void</span> closeAnalyzer(Analyzer analyzer) {</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;471</td> <td class="nbHitsCovered">&nbsp;52</td> <td class="src"><pre class="src">&nbsp; LOGGER.debug(<span class="string">"Closing Analyzer '{}'"</span>, analyzer.getName());</pre></td></tr>
<tr> <td class="numLine">&nbsp;472</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; <span class="keyword">try</span> {</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;473</td> <td class="nbHitsCovered">&nbsp;52</td> <td class="src"><pre class="src">&nbsp; analyzer.close();</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;474</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; } <span class="keyword">catch</span> (Throwable ex) {</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;475</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; LOGGER.trace(<span class="string">""</span>, ex);</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;476</td> <td class="nbHitsCovered">&nbsp;52</td> <td class="src"><pre class="src">&nbsp; }</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;477</td> <td class="nbHitsCovered">&nbsp;52</td> <td class="src"><pre class="src">&nbsp; }</pre></td></tr>
<tr> <td class="numLine">&nbsp;478</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;</pre></td></tr>
<tr> <td class="numLine">&nbsp;479</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; <span class="comment">/**</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;480</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> * Cycles through the cached web data sources and calls update on all of</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;481</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> * them.</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;482</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> *</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;483</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> * @throws UpdateException thrown if the operation fails</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;484</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> */</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;485</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; <span class="keyword">public</span> <span class="keyword">void</span> doUpdates() <span class="keyword">throws</span> UpdateException {</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;486</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; LOGGER.info(<span class="string">"Checking for updates"</span>);</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;487</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; <span class="keyword">final</span> <span class="keyword">long</span> updateStart = System.currentTimeMillis();</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;488</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; <span class="keyword">final</span> UpdateService service = <span class="keyword">new</span> UpdateService(serviceClassLoader);</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;489</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; <span class="keyword">final</span> Iterator&lt;CachedWebDataSource&gt; iterator = service.getDataSources();</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;490</td> <td class="nbHitsUncovered"><a title="Line 490: Conditional coverage 0% (0/2).">&nbsp;0</a></td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp;<a title="Line 490: Conditional coverage 0% (0/2)."> <span class="keyword">while</span> (iterator.hasNext()) {</a></span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;491</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; <span class="keyword">final</span> CachedWebDataSource source = iterator.next();</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;492</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; source.update();</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;493</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; }</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;494</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; LOGGER.info(<span class="string">"Check for updates complete ({} ms)"</span>, System.currentTimeMillis() - updateStart);</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;495</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; }</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;496</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;</pre></td></tr>
<tr> <td class="numLine">&nbsp;497</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; <span class="comment">/**</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;498</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> * Returns a full list of all of the analyzers. This is useful for reporting</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;499</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> * which analyzers where used.</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;500</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> *</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;501</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> * @return a list of Analyzers</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;502</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> */</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;503</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; <span class="keyword">public</span> List&lt;Analyzer&gt; getAnalyzers() {</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;504</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; <span class="keyword">final</span> List&lt;Analyzer&gt; ret = <span class="keyword">new</span> ArrayList&lt;Analyzer&gt;();</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;505</td> <td class="nbHitsUncovered"><a title="Line 505: Conditional coverage 0% (0/2).">&nbsp;0</a></td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp;<a title="Line 505: Conditional coverage 0% (0/2)."> <span class="keyword">for</span> (AnalysisPhase phase : AnalysisPhase.values()) {</a></span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;506</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; <span class="keyword">final</span> List&lt;Analyzer&gt; analyzerList = analyzers.get(phase);</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;507</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; ret.addAll(analyzerList);</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;508</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; }</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;509</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; <span class="keyword">return</span> ret;</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;510</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; }</pre></td></tr>
<tr> <td class="numLine">&nbsp;511</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;</pre></td></tr>
<tr> <td class="numLine">&nbsp;512</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; <span class="comment">/**</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;513</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> * Checks all analyzers to see if an extension is supported.</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;514</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> *</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;515</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> * @param file a file extension</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;516</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> * @return true or false depending on whether or not the file extension is</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;517</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> * supported</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;518</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> */</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;519</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; @Override</pre></td></tr>
<tr> <td class="numLine">&nbsp;520</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; <span class="keyword">public</span> <span class="keyword">boolean</span> accept(File file) {</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;521</td> <td class="nbHitsUncovered"><a title="Line 521: Conditional coverage 50% (1/2).">&nbsp;855</a></td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp;<a title="Line 521: Conditional coverage 50% (1/2)."> <span class="keyword">if</span> (file == <span class="keyword">null</span>) {</a></span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;522</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; <span class="keyword">return</span> <span class="keyword">false</span>;</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;523</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; }</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;524</td> <td class="nbHitsCovered">&nbsp;855</td> <td class="src"><pre class="src">&nbsp; <span class="keyword">boolean</span> scan = <span class="keyword">false</span>;</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;525</td> <td class="nbHitsCovered"><a title="Line 525: Conditional coverage 100% (2/2).">&nbsp;855</a></td> <td class="src"><pre class="src">&nbsp;<a title="Line 525: Conditional coverage 100% (2/2)."> <span class="keyword">for</span> (FileTypeAnalyzer a : <span class="keyword">this</span>.fileTypeAnalyzers) {</a></pre></td></tr>
<tr> <td class="numLine">&nbsp;526</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; <span class="comment">/* note, we can't break early on this loop as the analyzers need to know if</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;527</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> they have files to work on prior to initialization */</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;528</td> <td class="nbHitsCovered">&nbsp;15390</td> <td class="src"><pre class="src">&nbsp; scan |= a.accept(file);</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;529</td> <td class="nbHitsCovered">&nbsp;15390</td> <td class="src"><pre class="src">&nbsp; }</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;530</td> <td class="nbHitsCovered">&nbsp;855</td> <td class="src"><pre class="src">&nbsp; <span class="keyword">return</span> scan;</pre></td></tr>
<tr> <td class="numLine">&nbsp;531</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; }</pre></td></tr>
<tr> <td class="numLine">&nbsp;532</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;</pre></td></tr>
<tr> <td class="numLine">&nbsp;533</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; <span class="comment">/**</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;534</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> * Returns the set of file type analyzers.</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;535</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> *</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;536</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> * @return the set of file type analyzers</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;537</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> */</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;538</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; <span class="keyword">public</span> Set&lt;FileTypeAnalyzer&gt; getFileTypeAnalyzers() {</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;539</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; <span class="keyword">return</span> <span class="keyword">this</span>.fileTypeAnalyzers;</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;540</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; }</pre></td></tr>
<tr> <td class="numLine">&nbsp;541</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;</pre></td></tr>
<tr> <td class="numLine">&nbsp;542</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; <span class="comment">/**</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;543</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> * Checks the CPE Index to ensure documents exists. If none exist a</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;544</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> * NoDataException is thrown.</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;545</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> *</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;546</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> * @throws NoDataException thrown if no data exists in the CPE Index</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;547</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> * @throws DatabaseException thrown if there is an exception opening the</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;548</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> * database</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;549</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> */</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;550</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; <span class="keyword">private</span> <span class="keyword">void</span> ensureDataExists() <span class="keyword">throws</span> NoDataException, DatabaseException {</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;551</td> <td class="nbHitsCovered">&nbsp;2</td> <td class="src"><pre class="src">&nbsp; <span class="keyword">final</span> CveDB cve = <span class="keyword">new</span> CveDB();</pre></td></tr>
<tr> <td class="numLine">&nbsp;552</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; <span class="keyword">try</span> {</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;553</td> <td class="nbHitsCovered">&nbsp;2</td> <td class="src"><pre class="src">&nbsp; cve.open();</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;554</td> <td class="nbHitsUncovered"><a title="Line 554: Conditional coverage 50% (1/2).">&nbsp;2</a></td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp;<a title="Line 554: Conditional coverage 50% (1/2)."> <span class="keyword">if</span> (!cve.dataExists()) {</a></span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;555</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; <span class="keyword">throw</span> <span class="keyword">new</span> NoDataException(<span class="string">"No documents exist"</span>);</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;556</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; }</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;557</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; } <span class="keyword">catch</span> (DatabaseException ex) {</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;558</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; <span class="keyword">throw</span> <span class="keyword">new</span> NoDataException(ex.getMessage(), ex);</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;559</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; } <span class="keyword">finally</span> {</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;560</td> <td class="nbHitsCovered">&nbsp;2</td> <td class="src"><pre class="src">&nbsp; cve.close();</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;561</td> <td class="nbHitsCovered">&nbsp;2</td> <td class="src"><pre class="src">&nbsp; }</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;562</td> <td class="nbHitsCovered">&nbsp;2</td> <td class="src"><pre class="src">&nbsp; }</pre></td></tr>
<tr> <td class="numLine">&nbsp;563</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;}</pre></td></tr>
</table>
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