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DependencyCheck/dependency-check-core/cobertura/org.owasp.dependencycheck.Engine.html
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<!DOCTYPE html PUBLIC "-//W3C//DTD XHTML 1.0 Transitional//EN"
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<title>Coverage Report</title>
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<h5>Coverage Report - org.owasp.dependencycheck.Engine</h5>
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<table class="report">
<thead><tr> <td class="heading">Classes in this File</td> <td class="heading"><a class="dfn" href="help.html" onclick="popupwindow('help.html'); return false;">Line Coverage</a></td> <td class="heading"><a class="dfn" href="help.html" onclick="popupwindow('help.html'); return false;">Branch Coverage</a></td> <td class="heading"><a class="dfn" href="help.html" onclick="popupwindow('help.html'); return false;">Complexity</a></td></tr></thead>
<tr><td><a href="org.owasp.dependencycheck.Engine.html">Engine</a></td><td><table cellpadding="0px" cellspacing="0px" class="percentgraph"><tr class="percentgraph"><td align="right" class="percentgraph" width="40">63%</td><td class="percentgraph"><div class="percentgraph"><div class="greenbar" style="width:63px"><span class="text">163/255</span></div></div></td></tr></table></td><td><table cellpadding="0px" cellspacing="0px" class="percentgraph"><tr class="percentgraph"><td align="right" class="percentgraph" width="40">63%</td><td class="percentgraph"><div class="percentgraph"><div class="greenbar" style="width:63px"><span class="text">53/84</span></div></div></td></tr></table></td><td class="value"><span class="hidden">2.914285714285714;</span>2.914</td></tr>
</table>
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<table cellspacing="0" cellpadding="0" class="src">
<tr> <td class="numLine">&nbsp;1</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment">/*</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;2</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> * This file is part of dependency-check-core.</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;3</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> *</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;4</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> * Licensed under the Apache License, Version 2.0 (the "License");</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;5</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> * you may not use this file except in compliance with the License.</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;6</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> * You may obtain a copy of the License at</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;7</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> *</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;8</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> * http://www.apache.org/licenses/LICENSE-2.0</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;9</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> *</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;10</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> * Unless required by applicable law or agreed to in writing, software</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;11</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> * distributed under the License is distributed on an "AS IS" BASIS,</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;12</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;13</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> * See the License for the specific language governing permissions and</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;14</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> * limitations under the License.</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;15</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> *</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;16</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> * Copyright (c) 2012 Jeremy Long. All Rights Reserved.</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;17</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> */</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;18</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="keyword">package</span> org.owasp.dependencycheck;</pre></td></tr>
<tr> <td class="numLine">&nbsp;19</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;</pre></td></tr>
<tr> <td class="numLine">&nbsp;20</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="keyword">import</span> org.owasp.dependencycheck.analyzer.AnalysisPhase;</pre></td></tr>
<tr> <td class="numLine">&nbsp;21</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="keyword">import</span> org.owasp.dependencycheck.analyzer.Analyzer;</pre></td></tr>
<tr> <td class="numLine">&nbsp;22</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="keyword">import</span> org.owasp.dependencycheck.analyzer.AnalyzerService;</pre></td></tr>
<tr> <td class="numLine">&nbsp;23</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="keyword">import</span> org.owasp.dependencycheck.analyzer.FileTypeAnalyzer;</pre></td></tr>
<tr> <td class="numLine">&nbsp;24</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="keyword">import</span> org.owasp.dependencycheck.data.nvdcve.ConnectionFactory;</pre></td></tr>
<tr> <td class="numLine">&nbsp;25</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="keyword">import</span> org.owasp.dependencycheck.data.nvdcve.CveDB;</pre></td></tr>
<tr> <td class="numLine">&nbsp;26</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="keyword">import</span> org.owasp.dependencycheck.data.nvdcve.DatabaseException;</pre></td></tr>
<tr> <td class="numLine">&nbsp;27</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="keyword">import</span> org.owasp.dependencycheck.data.update.CachedWebDataSource;</pre></td></tr>
<tr> <td class="numLine">&nbsp;28</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="keyword">import</span> org.owasp.dependencycheck.data.update.UpdateService;</pre></td></tr>
<tr> <td class="numLine">&nbsp;29</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="keyword">import</span> org.owasp.dependencycheck.data.update.exception.UpdateException;</pre></td></tr>
<tr> <td class="numLine">&nbsp;30</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="keyword">import</span> org.owasp.dependencycheck.dependency.Dependency;</pre></td></tr>
<tr> <td class="numLine">&nbsp;31</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="keyword">import</span> org.owasp.dependencycheck.exception.ExceptionCollection;</pre></td></tr>
<tr> <td class="numLine">&nbsp;32</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="keyword">import</span> org.owasp.dependencycheck.exception.InitializationException;</pre></td></tr>
<tr> <td class="numLine">&nbsp;33</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="keyword">import</span> org.owasp.dependencycheck.exception.NoDataException;</pre></td></tr>
<tr> <td class="numLine">&nbsp;34</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="keyword">import</span> org.owasp.dependencycheck.utils.InvalidSettingException;</pre></td></tr>
<tr> <td class="numLine">&nbsp;35</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="keyword">import</span> org.owasp.dependencycheck.utils.Settings;</pre></td></tr>
<tr> <td class="numLine">&nbsp;36</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="keyword">import</span> org.slf4j.Logger;</pre></td></tr>
<tr> <td class="numLine">&nbsp;37</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="keyword">import</span> org.slf4j.LoggerFactory;</pre></td></tr>
<tr> <td class="numLine">&nbsp;38</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;</pre></td></tr>
<tr> <td class="numLine">&nbsp;39</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="keyword">import</span> java.io.File;</pre></td></tr>
<tr> <td class="numLine">&nbsp;40</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="keyword">import</span> java.io.FileFilter;</pre></td></tr>
<tr> <td class="numLine">&nbsp;41</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="keyword">import</span> java.util.ArrayList;</pre></td></tr>
<tr> <td class="numLine">&nbsp;42</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="keyword">import</span> java.util.Collection;</pre></td></tr>
<tr> <td class="numLine">&nbsp;43</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="keyword">import</span> java.util.Collections;</pre></td></tr>
<tr> <td class="numLine">&nbsp;44</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="keyword">import</span> java.util.EnumMap;</pre></td></tr>
<tr> <td class="numLine">&nbsp;45</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="keyword">import</span> java.util.HashSet;</pre></td></tr>
<tr> <td class="numLine">&nbsp;46</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="keyword">import</span> java.util.Iterator;</pre></td></tr>
<tr> <td class="numLine">&nbsp;47</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="keyword">import</span> java.util.List;</pre></td></tr>
<tr> <td class="numLine">&nbsp;48</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="keyword">import</span> java.util.Map;</pre></td></tr>
<tr> <td class="numLine">&nbsp;49</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="keyword">import</span> java.util.Set;</pre></td></tr>
<tr> <td class="numLine">&nbsp;50</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="keyword">import</span> java.util.concurrent.CancellationException;</pre></td></tr>
<tr> <td class="numLine">&nbsp;51</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="keyword">import</span> java.util.concurrent.ExecutionException;</pre></td></tr>
<tr> <td class="numLine">&nbsp;52</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="keyword">import</span> java.util.concurrent.ExecutorService;</pre></td></tr>
<tr> <td class="numLine">&nbsp;53</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="keyword">import</span> java.util.concurrent.Executors;</pre></td></tr>
<tr> <td class="numLine">&nbsp;54</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="keyword">import</span> java.util.concurrent.Future;</pre></td></tr>
<tr> <td class="numLine">&nbsp;55</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="keyword">import</span> java.util.concurrent.TimeUnit;</pre></td></tr>
<tr> <td class="numLine">&nbsp;56</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;</pre></td></tr>
<tr> <td class="numLine">&nbsp;57</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment">/**</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;58</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> * Scans files, directories, etc. for Dependencies. Analyzers are loaded and</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;59</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> * used to process the files found by the scan, if a file is encountered and an</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;60</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> * Analyzer is associated with the file type then the file is turned into a</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;61</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> * dependency.</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;62</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> *</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;63</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> * @author Jeremy Long</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;64</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> */</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;65</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="keyword">public</span> <span class="keyword">class</span> Engine <span class="keyword">implements</span> FileFilter {</pre></td></tr>
<tr> <td class="numLine">&nbsp;66</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;</pre></td></tr>
<tr> <td class="numLine">&nbsp;67</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; <span class="comment">/**</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;68</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> * The list of dependencies.</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;69</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> */</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;70</td> <td class="nbHitsCovered">&nbsp;6</td> <td class="src"><pre class="src">&nbsp; <span class="keyword">private</span> <span class="keyword">final</span> List&lt;Dependency&gt; dependencies = Collections.synchronizedList(<span class="keyword">new</span> ArrayList&lt;Dependency&gt;());</pre></td></tr>
<tr> <td class="numLine">&nbsp;71</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; <span class="comment">/**</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;72</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> * A Map of analyzers grouped by Analysis phase.</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;73</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> */</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;74</td> <td class="nbHitsCovered">&nbsp;6</td> <td class="src"><pre class="src">&nbsp; <span class="keyword">private</span> <span class="keyword">final</span> Map&lt;AnalysisPhase, List&lt;Analyzer&gt;&gt; analyzers = <span class="keyword">new</span> EnumMap&lt;AnalysisPhase, List&lt;Analyzer&gt;&gt;(AnalysisPhase.<span class="keyword">class</span>);</pre></td></tr>
<tr> <td class="numLine">&nbsp;75</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;</pre></td></tr>
<tr> <td class="numLine">&nbsp;76</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; <span class="comment">/**</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;77</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> * A Map of analyzers grouped by Analysis phase.</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;78</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> */</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;79</td> <td class="nbHitsCovered">&nbsp;6</td> <td class="src"><pre class="src">&nbsp; <span class="keyword">private</span> <span class="keyword">final</span> Set&lt;FileTypeAnalyzer&gt; fileTypeAnalyzers = <span class="keyword">new</span> HashSet&lt;FileTypeAnalyzer&gt;();</pre></td></tr>
<tr> <td class="numLine">&nbsp;80</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;</pre></td></tr>
<tr> <td class="numLine">&nbsp;81</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; <span class="comment">/**</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;82</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> * The ClassLoader to use when dynamically loading Analyzer and Update</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;83</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> * services.</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;84</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> */</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;85</td> <td class="nbHitsCovered">&nbsp;6</td> <td class="src"><pre class="src">&nbsp; <span class="keyword">private</span> ClassLoader serviceClassLoader = Thread.currentThread().getContextClassLoader();</pre></td></tr>
<tr> <td class="numLine">&nbsp;86</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; <span class="comment">/**</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;87</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> * The Logger for use throughout the class.</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;88</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> */</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;89</td> <td class="nbHitsCovered">&nbsp;1</td> <td class="src"><pre class="src">&nbsp; <span class="keyword">private</span> <span class="keyword">static</span> <span class="keyword">final</span> Logger LOGGER = LoggerFactory.getLogger(Engine.<span class="keyword">class</span>);</pre></td></tr>
<tr> <td class="numLine">&nbsp;90</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;</pre></td></tr>
<tr> <td class="numLine">&nbsp;91</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; <span class="comment">/**</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;92</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> * Creates a new Engine.</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;93</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> *</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;94</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> * @throws DatabaseException thrown if there is an error connecting to the</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;95</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> * database</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;96</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> */</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;97</td> <td class="nbHitsCovered">&nbsp;6</td> <td class="src"><pre class="src">&nbsp; <span class="keyword">public</span> Engine() <span class="keyword">throws</span> DatabaseException {</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;98</td> <td class="nbHitsCovered">&nbsp;6</td> <td class="src"><pre class="src">&nbsp; initializeEngine();</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;99</td> <td class="nbHitsCovered">&nbsp;6</td> <td class="src"><pre class="src">&nbsp; }</pre></td></tr>
<tr> <td class="numLine">&nbsp;100</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;</pre></td></tr>
<tr> <td class="numLine">&nbsp;101</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; <span class="comment">/**</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;102</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> * Creates a new Engine.</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;103</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> *</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;104</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> * @param serviceClassLoader a reference the class loader being used</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;105</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> * @throws DatabaseException thrown if there is an error connecting to the</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;106</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> * database</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;107</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> */</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;108</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; <span class="keyword">public</span> Engine(ClassLoader serviceClassLoader) <span class="keyword">throws</span> DatabaseException {</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;109</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; <span class="keyword">this</span>.serviceClassLoader = serviceClassLoader;</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;110</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; initializeEngine();</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;111</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; }</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;112</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;</pre></td></tr>
<tr> <td class="numLine">&nbsp;113</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; <span class="comment">/**</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;114</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> * Creates a new Engine using the specified classloader to dynamically load</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;115</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> * Analyzer and Update services.</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;116</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> *</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;117</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> * @throws DatabaseException thrown if there is an error connecting to the</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;118</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> * database</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;119</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> */</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;120</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; <span class="keyword">protected</span> <span class="keyword">final</span> <span class="keyword">void</span> initializeEngine() <span class="keyword">throws</span> DatabaseException {</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;121</td> <td class="nbHitsCovered">&nbsp;6</td> <td class="src"><pre class="src">&nbsp; ConnectionFactory.initialize();</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;122</td> <td class="nbHitsCovered">&nbsp;6</td> <td class="src"><pre class="src">&nbsp; loadAnalyzers();</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;123</td> <td class="nbHitsCovered">&nbsp;6</td> <td class="src"><pre class="src">&nbsp; }</pre></td></tr>
<tr> <td class="numLine">&nbsp;124</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;</pre></td></tr>
<tr> <td class="numLine">&nbsp;125</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; <span class="comment">/**</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;126</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> * Properly cleans up resources allocated during analysis.</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;127</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> */</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;128</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; <span class="keyword">public</span> <span class="keyword">void</span> cleanup() {</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;129</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; ConnectionFactory.cleanup();</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;130</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; }</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;131</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;</pre></td></tr>
<tr> <td class="numLine">&nbsp;132</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; <span class="comment">/**</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;133</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> * Loads the analyzers specified in the configuration file (or system</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;134</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> * properties).</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;135</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> */</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;136</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; <span class="keyword">private</span> <span class="keyword">void</span> loadAnalyzers() {</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;137</td> <td class="nbHitsUncovered"><a title="Line 137: Conditional coverage 50% (1/2).">&nbsp;6</a></td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp;<a title="Line 137: Conditional coverage 50% (1/2)."> <span class="keyword">if</span> (!analyzers.isEmpty()) {</a></span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;138</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; <span class="keyword">return</span>;</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;139</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; }</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;140</td> <td class="nbHitsCovered"><a title="Line 140: Conditional coverage 100% (2/2).">&nbsp;66</a></td> <td class="src"><pre class="src">&nbsp;<a title="Line 140: Conditional coverage 100% (2/2)."> <span class="keyword">for</span> (AnalysisPhase phase : AnalysisPhase.values()) {</a></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;141</td> <td class="nbHitsCovered">&nbsp;60</td> <td class="src"><pre class="src">&nbsp; analyzers.put(phase, <span class="keyword">new</span> ArrayList&lt;Analyzer&gt;());</pre></td></tr>
<tr> <td class="numLine">&nbsp;142</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; }</pre></td></tr>
<tr> <td class="numLine">&nbsp;143</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;144</td> <td class="nbHitsCovered">&nbsp;6</td> <td class="src"><pre class="src">&nbsp; <span class="keyword">final</span> AnalyzerService service = <span class="keyword">new</span> AnalyzerService(serviceClassLoader);</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;145</td> <td class="nbHitsCovered">&nbsp;6</td> <td class="src"><pre class="src">&nbsp; <span class="keyword">final</span> List&lt;Analyzer&gt; iterator = service.getAnalyzers();</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;146</td> <td class="nbHitsCovered"><a title="Line 146: Conditional coverage 100% (2/2).">&nbsp;6</a></td> <td class="src"><pre class="src">&nbsp;<a title="Line 146: Conditional coverage 100% (2/2)."> <span class="keyword">for</span> (Analyzer a : iterator) {</a></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;147</td> <td class="nbHitsCovered">&nbsp;156</td> <td class="src"><pre class="src">&nbsp; analyzers.get(a.getAnalysisPhase()).add(a);</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;148</td> <td class="nbHitsCovered"><a title="Line 148: Conditional coverage 100% (2/2).">&nbsp;156</a></td> <td class="src"><pre class="src">&nbsp;<a title="Line 148: Conditional coverage 100% (2/2)."> <span class="keyword">if</span> (a <span class="keyword">instanceof</span> FileTypeAnalyzer) {</a></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;149</td> <td class="nbHitsCovered">&nbsp;108</td> <td class="src"><pre class="src">&nbsp; <span class="keyword">this</span>.fileTypeAnalyzers.add((FileTypeAnalyzer) a);</pre></td></tr>
<tr> <td class="numLine">&nbsp;150</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; }</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;151</td> <td class="nbHitsCovered">&nbsp;156</td> <td class="src"><pre class="src">&nbsp; }</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;152</td> <td class="nbHitsCovered">&nbsp;6</td> <td class="src"><pre class="src">&nbsp; }</pre></td></tr>
<tr> <td class="numLine">&nbsp;153</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;</pre></td></tr>
<tr> <td class="numLine">&nbsp;154</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; <span class="comment">/**</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;155</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> * Get the List of the analyzers for a specific phase of analysis.</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;156</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> *</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;157</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> * @param phase the phase to get the configured analyzers.</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;158</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> * @return the analyzers loaded</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;159</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> */</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;160</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; <span class="keyword">public</span> List&lt;Analyzer&gt; getAnalyzers(AnalysisPhase phase) {</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;161</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; <span class="keyword">return</span> analyzers.get(phase);</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;162</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; }</pre></td></tr>
<tr> <td class="numLine">&nbsp;163</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;</pre></td></tr>
<tr> <td class="numLine">&nbsp;164</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; <span class="comment">/**</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;165</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> * Get the dependencies identified. The returned list is a reference to the</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;166</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> * engine's synchronized list. You must synchronize on it, when you modify</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;167</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> * and iterate over it from multiple threads. E.g. this holds for analyzers</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;168</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> * supporting parallel processing during their analysis phase.</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;169</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> *</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;170</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> * @return the dependencies identified</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;171</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> * @see Collections#synchronizedList(List)</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;172</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> * @see Analyzer#supportsParallelProcessing()</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;173</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> */</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;174</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; <span class="keyword">public</span> List&lt;Dependency&gt; getDependencies() {</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;175</td> <td class="nbHitsCovered">&nbsp;46</td> <td class="src"><pre class="src">&nbsp; <span class="keyword">return</span> dependencies;</pre></td></tr>
<tr> <td class="numLine">&nbsp;176</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; }</pre></td></tr>
<tr> <td class="numLine">&nbsp;177</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;</pre></td></tr>
<tr> <td class="numLine">&nbsp;178</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; <span class="comment">/**</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;179</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> * Sets the dependencies.</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;180</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> *</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;181</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> * @param dependencies the dependencies</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;182</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> */</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;183</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; <span class="keyword">public</span> <span class="keyword">void</span> setDependencies(List&lt;Dependency&gt; dependencies) {</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;184</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; <span class="keyword">synchronized</span> (<span class="keyword">this</span>.dependencies) {</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;185</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; <span class="keyword">this</span>.dependencies.clear();</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;186</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; <span class="keyword">this</span>.dependencies.addAll(dependencies);</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;187</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; }</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;188</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; }</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;189</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;</pre></td></tr>
<tr> <td class="numLine">&nbsp;190</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; <span class="comment">/**</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;191</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> * Scans an array of files or directories. If a directory is specified, it</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;192</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> * will be scanned recursively. Any dependencies identified are added to the</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;193</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> * dependency collection.</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;194</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> *</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;195</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> * @param paths an array of paths to files or directories to be analyzed</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;196</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> * @return the list of dependencies scanned</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;197</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> * @since v0.3.2.5</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;198</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> */</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;199</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; <span class="keyword">public</span> List&lt;Dependency&gt; scan(String[] paths) {</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;200</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; <span class="keyword">return</span> scan(paths, <span class="keyword">null</span>);</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;201</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; }</pre></td></tr>
<tr> <td class="numLine">&nbsp;202</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;</pre></td></tr>
<tr> <td class="numLine">&nbsp;203</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; <span class="comment">/**</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;204</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> * Scans an array of files or directories. If a directory is specified, it</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;205</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> * will be scanned recursively. Any dependencies identified are added to the</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;206</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> * dependency collection.</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;207</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> *</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;208</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> * @param paths an array of paths to files or directories to be analyzed</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;209</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> * @param projectReference the name of the project or scope in which the</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;210</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> * dependency was identified</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;211</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> * @return the list of dependencies scanned</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;212</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> * @since v1.4.4</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;213</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> */</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;214</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; <span class="keyword">public</span> List&lt;Dependency&gt; scan(String[] paths, String projectReference) {</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;215</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; <span class="keyword">final</span> List&lt;Dependency&gt; deps = <span class="keyword">new</span> ArrayList&lt;Dependency&gt;();</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;216</td> <td class="nbHitsUncovered"><a title="Line 216: Conditional coverage 0% (0/2).">&nbsp;0</a></td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp;<a title="Line 216: Conditional coverage 0% (0/2)."> <span class="keyword">for</span> (String path : paths) {</a></span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;217</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; <span class="keyword">final</span> List&lt;Dependency&gt; d = scan(path, projectReference);</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;218</td> <td class="nbHitsUncovered"><a title="Line 218: Conditional coverage 0% (0/2).">&nbsp;0</a></td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp;<a title="Line 218: Conditional coverage 0% (0/2)."> <span class="keyword">if</span> (d != <span class="keyword">null</span>) {</a></span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;219</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; deps.addAll(d);</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;220</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; }</pre></td></tr>
<tr> <td class="numLine">&nbsp;221</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; }</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;222</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; <span class="keyword">return</span> deps;</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;223</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; }</pre></td></tr>
<tr> <td class="numLine">&nbsp;224</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;</pre></td></tr>
<tr> <td class="numLine">&nbsp;225</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; <span class="comment">/**</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;226</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> * Scans a given file or directory. If a directory is specified, it will be</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;227</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> * scanned recursively. Any dependencies identified are added to the</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;228</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> * dependency collection.</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;229</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> *</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;230</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> * @param path the path to a file or directory to be analyzed</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;231</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> * @return the list of dependencies scanned</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;232</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> */</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;233</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; <span class="keyword">public</span> List&lt;Dependency&gt; scan(String path) {</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;234</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; <span class="keyword">return</span> scan(path, <span class="keyword">null</span>);</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;235</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; }</pre></td></tr>
<tr> <td class="numLine">&nbsp;236</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;</pre></td></tr>
<tr> <td class="numLine">&nbsp;237</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; <span class="comment">/**</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;238</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> * Scans a given file or directory. If a directory is specified, it will be</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;239</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> * scanned recursively. Any dependencies identified are added to the</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;240</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> * dependency collection.</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;241</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> *</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;242</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> * @param path the path to a file or directory to be analyzed</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;243</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> * @param projectReference the name of the project or scope in which the</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;244</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> * dependency was identified</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;245</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> * @return the list of dependencies scanned</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;246</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> * @since v1.4.4</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;247</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> */</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;248</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; <span class="keyword">public</span> List&lt;Dependency&gt; scan(String path, String projectReference) {</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;249</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; <span class="keyword">final</span> File file = <span class="keyword">new</span> File(path);</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;250</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; <span class="keyword">return</span> scan(file, projectReference);</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;251</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; }</pre></td></tr>
<tr> <td class="numLine">&nbsp;252</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;</pre></td></tr>
<tr> <td class="numLine">&nbsp;253</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; <span class="comment">/**</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;254</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> * Scans an array of files or directories. If a directory is specified, it</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;255</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> * will be scanned recursively. Any dependencies identified are added to the</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;256</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> * dependency collection.</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;257</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> *</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;258</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> * @param files an array of paths to files or directories to be analyzed.</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;259</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> * @return the list of dependencies</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;260</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> * @since v0.3.2.5</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;261</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> */</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;262</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; <span class="keyword">public</span> List&lt;Dependency&gt; scan(File[] files) {</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;263</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; <span class="keyword">return</span> scan(files, <span class="keyword">null</span>);</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;264</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; }</pre></td></tr>
<tr> <td class="numLine">&nbsp;265</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;</pre></td></tr>
<tr> <td class="numLine">&nbsp;266</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; <span class="comment">/**</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;267</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> * Scans an array of files or directories. If a directory is specified, it</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;268</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> * will be scanned recursively. Any dependencies identified are added to the</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;269</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> * dependency collection.</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;270</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> *</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;271</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> * @param files an array of paths to files or directories to be analyzed.</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;272</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> * @param projectReference the name of the project or scope in which the</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;273</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> * dependency was identified</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;274</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> * @return the list of dependencies</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;275</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> * @since v1.4.4</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;276</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> */</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;277</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; <span class="keyword">public</span> List&lt;Dependency&gt; scan(File[] files, String projectReference) {</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;278</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; <span class="keyword">final</span> List&lt;Dependency&gt; deps = <span class="keyword">new</span> ArrayList&lt;Dependency&gt;();</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;279</td> <td class="nbHitsUncovered"><a title="Line 279: Conditional coverage 0% (0/2).">&nbsp;0</a></td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp;<a title="Line 279: Conditional coverage 0% (0/2)."> <span class="keyword">for</span> (File file : files) {</a></span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;280</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; <span class="keyword">final</span> List&lt;Dependency&gt; d = scan(file, projectReference);</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;281</td> <td class="nbHitsUncovered"><a title="Line 281: Conditional coverage 0% (0/2).">&nbsp;0</a></td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp;<a title="Line 281: Conditional coverage 0% (0/2)."> <span class="keyword">if</span> (d != <span class="keyword">null</span>) {</a></span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;282</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; deps.addAll(d);</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;283</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; }</pre></td></tr>
<tr> <td class="numLine">&nbsp;284</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; }</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;285</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; <span class="keyword">return</span> deps;</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;286</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; }</pre></td></tr>
<tr> <td class="numLine">&nbsp;287</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;</pre></td></tr>
<tr> <td class="numLine">&nbsp;288</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; <span class="comment">/**</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;289</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> * Scans a collection of files or directories. If a directory is specified,</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;290</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> * it will be scanned recursively. Any dependencies identified are added to</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;291</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> * the dependency collection.</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;292</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> *</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;293</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> * @param files a set of paths to files or directories to be analyzed</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;294</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> * @return the list of dependencies scanned</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;295</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> * @since v0.3.2.5</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;296</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> */</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;297</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; <span class="keyword">public</span> List&lt;Dependency&gt; scan(Collection&lt;File&gt; files) {</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;298</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; <span class="keyword">return</span> scan(files, <span class="keyword">null</span>);</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;299</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; }</pre></td></tr>
<tr> <td class="numLine">&nbsp;300</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;</pre></td></tr>
<tr> <td class="numLine">&nbsp;301</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; <span class="comment">/**</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;302</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> * Scans a collection of files or directories. If a directory is specified,</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;303</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> * it will be scanned recursively. Any dependencies identified are added to</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;304</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> * the dependency collection.</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;305</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> *</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;306</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> * @param files a set of paths to files or directories to be analyzed</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;307</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> * @param projectReference the name of the project or scope in which the</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;308</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> * dependency was identified</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;309</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> * @return the list of dependencies scanned</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;310</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> * @since v1.4.4</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;311</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> */</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;312</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; <span class="keyword">public</span> List&lt;Dependency&gt; scan(Collection&lt;File&gt; files, String projectReference) {</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;313</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; <span class="keyword">final</span> List&lt;Dependency&gt; deps = <span class="keyword">new</span> ArrayList&lt;Dependency&gt;();</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;314</td> <td class="nbHitsUncovered"><a title="Line 314: Conditional coverage 0% (0/2).">&nbsp;0</a></td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp;<a title="Line 314: Conditional coverage 0% (0/2)."> <span class="keyword">for</span> (File file : files) {</a></span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;315</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; <span class="keyword">final</span> List&lt;Dependency&gt; d = scan(file, projectReference);</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;316</td> <td class="nbHitsUncovered"><a title="Line 316: Conditional coverage 0% (0/2).">&nbsp;0</a></td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp;<a title="Line 316: Conditional coverage 0% (0/2)."> <span class="keyword">if</span> (d != <span class="keyword">null</span>) {</a></span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;317</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; deps.addAll(d);</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;318</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; }</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;319</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; }</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;320</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; <span class="keyword">return</span> deps;</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;321</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; }</pre></td></tr>
<tr> <td class="numLine">&nbsp;322</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;</pre></td></tr>
<tr> <td class="numLine">&nbsp;323</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; <span class="comment">/**</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;324</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> * Scans a given file or directory. If a directory is specified, it will be</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;325</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> * scanned recursively. Any dependencies identified are added to the</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;326</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> * dependency collection.</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;327</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> *</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;328</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> * @param file the path to a file or directory to be analyzed</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;329</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> * @return the list of dependencies scanned</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;330</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> * @since v0.3.2.4</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;331</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> */</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;332</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; <span class="keyword">public</span> List&lt;Dependency&gt; scan(File file) {</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;333</td> <td class="nbHitsCovered">&nbsp;5</td> <td class="src"><pre class="src">&nbsp; <span class="keyword">return</span> scan(file, <span class="keyword">null</span>);</pre></td></tr>
<tr> <td class="numLine">&nbsp;334</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; }</pre></td></tr>
<tr> <td class="numLine">&nbsp;335</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;</pre></td></tr>
<tr> <td class="numLine">&nbsp;336</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; <span class="comment">/**</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;337</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> * Scans a given file or directory. If a directory is specified, it will be</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;338</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> * scanned recursively. Any dependencies identified are added to the</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;339</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> * dependency collection.</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;340</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> *</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;341</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> * @param file the path to a file or directory to be analyzed</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;342</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> * @param projectReference the name of the project or scope in which the</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;343</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> * dependency was identified</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;344</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> * @return the list of dependencies scanned</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;345</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> * @since v1.4.4</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;346</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> */</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;347</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; <span class="keyword">public</span> List&lt;Dependency&gt; scan(File file, String projectReference) {</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;348</td> <td class="nbHitsUncovered"><a title="Line 348: Conditional coverage 50% (1/2).">&nbsp;5</a></td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp;<a title="Line 348: Conditional coverage 50% (1/2)."> <span class="keyword">if</span> (file.exists()) {</a></span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;349</td> <td class="nbHitsCovered"><a title="Line 349: Conditional coverage 100% (2/2).">&nbsp;5</a></td> <td class="src"><pre class="src">&nbsp;<a title="Line 349: Conditional coverage 100% (2/2)."> <span class="keyword">if</span> (file.isDirectory()) {</a></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;350</td> <td class="nbHitsCovered">&nbsp;3</td> <td class="src"><pre class="src">&nbsp; <span class="keyword">return</span> scanDirectory(file, projectReference);</pre></td></tr>
<tr> <td class="numLine">&nbsp;351</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; } <span class="keyword">else</span> {</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;352</td> <td class="nbHitsCovered">&nbsp;2</td> <td class="src"><pre class="src">&nbsp; <span class="keyword">final</span> Dependency d = scanFile(file, projectReference);</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;353</td> <td class="nbHitsUncovered"><a title="Line 353: Conditional coverage 50% (1/2).">&nbsp;2</a></td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp;<a title="Line 353: Conditional coverage 50% (1/2)."> <span class="keyword">if</span> (d != <span class="keyword">null</span>) {</a></span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;354</td> <td class="nbHitsCovered">&nbsp;2</td> <td class="src"><pre class="src">&nbsp; <span class="keyword">final</span> List&lt;Dependency&gt; deps = <span class="keyword">new</span> ArrayList&lt;Dependency&gt;();</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;355</td> <td class="nbHitsCovered">&nbsp;2</td> <td class="src"><pre class="src">&nbsp; deps.add(d);</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;356</td> <td class="nbHitsCovered">&nbsp;2</td> <td class="src"><pre class="src">&nbsp; <span class="keyword">return</span> deps;</pre></td></tr>
<tr> <td class="numLine">&nbsp;357</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; }</pre></td></tr>
<tr> <td class="numLine">&nbsp;358</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; }</pre></td></tr>
<tr> <td class="numLine">&nbsp;359</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; }</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;360</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; <span class="keyword">return</span> <span class="keyword">null</span>;</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;361</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; }</pre></td></tr>
<tr> <td class="numLine">&nbsp;362</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;</pre></td></tr>
<tr> <td class="numLine">&nbsp;363</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; <span class="comment">/**</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;364</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> * Recursively scans files and directories. Any dependencies identified are</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;365</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> * added to the dependency collection.</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;366</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> *</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;367</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> * @param dir the directory to scan</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;368</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> * @return the list of Dependency objects scanned</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;369</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> */</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;370</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; <span class="keyword">protected</span> List&lt;Dependency&gt; scanDirectory(File dir) {</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;371</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; <span class="keyword">return</span> scanDirectory(dir, <span class="keyword">null</span>);</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;372</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; }</pre></td></tr>
<tr> <td class="numLine">&nbsp;373</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;</pre></td></tr>
<tr> <td class="numLine">&nbsp;374</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; <span class="comment">/**</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;375</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> * Recursively scans files and directories. Any dependencies identified are</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;376</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> * added to the dependency collection.</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;377</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> *</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;378</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> * @param dir the directory to scan</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;379</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> * @param projectReference the name of the project or scope in which the</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;380</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> * dependency was identified</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;381</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> * @return the list of Dependency objects scanned</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;382</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> * @since v1.4.4</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;383</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> */</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;384</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; <span class="keyword">protected</span> List&lt;Dependency&gt; scanDirectory(File dir, String projectReference) {</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;385</td> <td class="nbHitsCovered">&nbsp;46</td> <td class="src"><pre class="src">&nbsp; <span class="keyword">final</span> File[] files = dir.listFiles();</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;386</td> <td class="nbHitsCovered">&nbsp;46</td> <td class="src"><pre class="src">&nbsp; <span class="keyword">final</span> List&lt;Dependency&gt; deps = <span class="keyword">new</span> ArrayList&lt;Dependency&gt;();</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;387</td> <td class="nbHitsUncovered"><a title="Line 387: Conditional coverage 50% (1/2).">&nbsp;46</a></td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp;<a title="Line 387: Conditional coverage 50% (1/2)."> <span class="keyword">if</span> (files != <span class="keyword">null</span>) {</a></span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;388</td> <td class="nbHitsCovered"><a title="Line 388: Conditional coverage 100% (2/2).">&nbsp;93</a></td> <td class="src"><pre class="src">&nbsp;<a title="Line 388: Conditional coverage 100% (2/2)."> <span class="keyword">for</span> (File f : files) {</a></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;389</td> <td class="nbHitsCovered"><a title="Line 389: Conditional coverage 100% (2/2).">&nbsp;47</a></td> <td class="src"><pre class="src">&nbsp;<a title="Line 389: Conditional coverage 100% (2/2)."> <span class="keyword">if</span> (f.isDirectory()) {</a></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;390</td> <td class="nbHitsCovered">&nbsp;43</td> <td class="src"><pre class="src">&nbsp; <span class="keyword">final</span> List&lt;Dependency&gt; d = scanDirectory(f, projectReference);</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;391</td> <td class="nbHitsUncovered"><a title="Line 391: Conditional coverage 50% (1/2).">&nbsp;43</a></td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp;<a title="Line 391: Conditional coverage 50% (1/2)."> <span class="keyword">if</span> (d != <span class="keyword">null</span>) {</a></span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;392</td> <td class="nbHitsCovered">&nbsp;43</td> <td class="src"><pre class="src">&nbsp; deps.addAll(d);</pre></td></tr>
<tr> <td class="numLine">&nbsp;393</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; }</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;394</td> <td class="nbHitsCovered">&nbsp;43</td> <td class="src"><pre class="src">&nbsp; } <span class="keyword">else</span> {</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;395</td> <td class="nbHitsCovered">&nbsp;4</td> <td class="src"><pre class="src">&nbsp; <span class="keyword">final</span> Dependency d = scanFile(f, projectReference);</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;396</td> <td class="nbHitsCovered">&nbsp;4</td> <td class="src"><pre class="src">&nbsp; deps.add(d);</pre></td></tr>
<tr> <td class="numLine">&nbsp;397</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; }</pre></td></tr>
<tr> <td class="numLine">&nbsp;398</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; }</pre></td></tr>
<tr> <td class="numLine">&nbsp;399</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; }</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;400</td> <td class="nbHitsCovered">&nbsp;46</td> <td class="src"><pre class="src">&nbsp; <span class="keyword">return</span> deps;</pre></td></tr>
<tr> <td class="numLine">&nbsp;401</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; }</pre></td></tr>
<tr> <td class="numLine">&nbsp;402</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;</pre></td></tr>
<tr> <td class="numLine">&nbsp;403</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; <span class="comment">/**</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;404</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> * Scans a specified file. If a dependency is identified it is added to the</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;405</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> * dependency collection.</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;406</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> *</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;407</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> * @param file The file to scan</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;408</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> * @return the scanned dependency</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;409</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> */</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;410</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; <span class="keyword">protected</span> Dependency scanFile(File file) {</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;411</td> <td class="nbHitsCovered">&nbsp;3</td> <td class="src"><pre class="src">&nbsp; <span class="keyword">return</span> scanFile(file, <span class="keyword">null</span>);</pre></td></tr>
<tr> <td class="numLine">&nbsp;412</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; }</pre></td></tr>
<tr> <td class="numLine">&nbsp;413</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;</pre></td></tr>
<tr> <td class="numLine">&nbsp;414</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; <span class="comment">/**</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;415</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> * Scans a specified file. If a dependency is identified it is added to the</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;416</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> * dependency collection.</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;417</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> *</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;418</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> * @param file The file to scan</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;419</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> * @param projectReference the name of the project or scope in which the</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;420</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> * dependency was identified</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;421</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> * @return the scanned dependency</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;422</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> * @since v1.4.4</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;423</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> */</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;424</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; <span class="keyword">protected</span> Dependency scanFile(File file, String projectReference) {</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;425</td> <td class="nbHitsCovered">&nbsp;9</td> <td class="src"><pre class="src">&nbsp; Dependency dependency = <span class="keyword">null</span>;</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;426</td> <td class="nbHitsUncovered"><a title="Line 426: Conditional coverage 50% (1/2).">&nbsp;9</a></td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp;<a title="Line 426: Conditional coverage 50% (1/2)."> <span class="keyword">if</span> (file.isFile()) {</a></span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;427</td> <td class="nbHitsCovered"><a title="Line 427: Conditional coverage 100% (2/2).">&nbsp;9</a></td> <td class="src"><pre class="src">&nbsp;<a title="Line 427: Conditional coverage 100% (2/2)."> <span class="keyword">if</span> (accept(file)) {</a></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;428</td> <td class="nbHitsCovered">&nbsp;7</td> <td class="src"><pre class="src">&nbsp; dependency = <span class="keyword">new</span> Dependency(file);</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;429</td> <td class="nbHitsUncovered"><a title="Line 429: Conditional coverage 50% (1/2).">&nbsp;7</a></td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp;<a title="Line 429: Conditional coverage 50% (1/2)."> <span class="keyword">if</span> (projectReference != <span class="keyword">null</span>) {</a></span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;430</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; dependency.addProjectReference(projectReference);</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;431</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; }</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;432</td> <td class="nbHitsCovered">&nbsp;7</td> <td class="src"><pre class="src">&nbsp; <span class="keyword">final</span> String sha1 = dependency.getSha1sum();</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;433</td> <td class="nbHitsCovered">&nbsp;7</td> <td class="src"><pre class="src">&nbsp; <span class="keyword">boolean</span> found = <span class="keyword">false</span>;</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;434</td> <td class="nbHitsCovered">&nbsp;7</td> <td class="src"><pre class="src">&nbsp; <span class="keyword">synchronized</span> (dependencies) {</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;435</td> <td class="nbHitsUncovered"><a title="Line 435: Conditional coverage 50% (1/2).">&nbsp;7</a></td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp;<a title="Line 435: Conditional coverage 50% (1/2)."> <span class="keyword">if</span> (sha1 != <span class="keyword">null</span>) {</a></span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;436</td> <td class="nbHitsCovered"><a title="Line 436: Conditional coverage 100% (2/2).">&nbsp;7</a></td> <td class="src"><pre class="src">&nbsp;<a title="Line 436: Conditional coverage 100% (2/2)."> <span class="keyword">for</span> (Dependency existing : dependencies) {</a></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;437</td> <td class="nbHitsCovered"><a title="Line 437: Conditional coverage 100% (2/2).">&nbsp;4</a></td> <td class="src"><pre class="src">&nbsp;<a title="Line 437: Conditional coverage 100% (2/2)."> <span class="keyword">if</span> (sha1.equals(existing.getSha1sum())) {</a></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;438</td> <td class="nbHitsCovered">&nbsp;1</td> <td class="src"><pre class="src">&nbsp; found = <span class="keyword">true</span>;</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;439</td> <td class="nbHitsUncovered"><a title="Line 439: Conditional coverage 50% (1/2).">&nbsp;1</a></td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp;<a title="Line 439: Conditional coverage 50% (1/2)."> <span class="keyword">if</span> (projectReference != <span class="keyword">null</span>) {</a></span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;440</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; existing.addProjectReference(projectReference);</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;441</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; }</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;442</td> <td class="nbHitsUncovered"><a title="Line 442: Conditional coverage 50% (2/4) [each condition: 50%, 50%].">&nbsp;1</a></td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp;<a title="Line 442: Conditional coverage 50% (2/4) [each condition: 50%, 50%]."> <span class="keyword">if</span> (existing.getActualFilePath() != <span class="keyword">null</span> &amp;&amp; dependency.getActualFilePath() != <span class="keyword">null</span></a></span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;443</td> <td class="nbHitsUncovered"><a title="Line 443: Conditional coverage 50% (1/2).">&nbsp;1</a></td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp;<a title="Line 443: Conditional coverage 50% (1/2)."> &amp;&amp; !existing.getActualFilePath().equals(dependency.getActualFilePath())) {</a></span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;444</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; existing.addRelatedDependency(dependency);</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;445</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; } <span class="keyword">else</span> {</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;446</td> <td class="nbHitsCovered">&nbsp;1</td> <td class="src"><pre class="src">&nbsp; dependency = existing;</pre></td></tr>
<tr> <td class="numLine">&nbsp;447</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; }</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;448</td> <td class="nbHitsCovered">&nbsp;1</td> <td class="src"><pre class="src">&nbsp; <span class="keyword">break</span>;</pre></td></tr>
<tr> <td class="numLine">&nbsp;449</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; }</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;450</td> <td class="nbHitsCovered">&nbsp;3</td> <td class="src"><pre class="src">&nbsp; }</pre></td></tr>
<tr> <td class="numLine">&nbsp;451</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; }</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;452</td> <td class="nbHitsCovered"><a title="Line 452: Conditional coverage 100% (2/2).">&nbsp;7</a></td> <td class="src"><pre class="src">&nbsp;<a title="Line 452: Conditional coverage 100% (2/2)."> <span class="keyword">if</span> (!found) {</a></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;453</td> <td class="nbHitsCovered">&nbsp;6</td> <td class="src"><pre class="src">&nbsp; dependencies.add(dependency);</pre></td></tr>
<tr> <td class="numLine">&nbsp;454</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; }</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;455</td> <td class="nbHitsCovered">&nbsp;7</td> <td class="src"><pre class="src">&nbsp; }</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;456</td> <td class="nbHitsCovered">&nbsp;7</td> <td class="src"><pre class="src">&nbsp; } <span class="keyword">else</span> {</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;457</td> <td class="nbHitsCovered">&nbsp;2</td> <td class="src"><pre class="src">&nbsp; LOGGER.debug(<span class="string">"Path passed to scanFile(File) is not a file: {}. Skipping the file."</span>, file);</pre></td></tr>
<tr> <td class="numLine">&nbsp;458</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; }</pre></td></tr>
<tr> <td class="numLine">&nbsp;459</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; }</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;460</td> <td class="nbHitsCovered">&nbsp;9</td> <td class="src"><pre class="src">&nbsp; <span class="keyword">return</span> dependency;</pre></td></tr>
<tr> <td class="numLine">&nbsp;461</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; }</pre></td></tr>
<tr> <td class="numLine">&nbsp;462</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;</pre></td></tr>
<tr> <td class="numLine">&nbsp;463</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; <span class="comment">/**</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;464</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> * Runs the analyzers against all of the dependencies. Since the mutable</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;465</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> * dependencies list is exposed via {@link #getDependencies()}, this method</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;466</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> * iterates over a copy of the dependencies list. Thus, the potential for</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;467</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> * {@link java.util.ConcurrentModificationException}s is avoided, and</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;468</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> * analyzers may safely add or remove entries from the dependencies list.</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;469</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> * &lt;p&gt;</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;470</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> * Every effort is made to complete analysis on the dependencies. In some</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;471</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> * cases an exception will occur with part of the analysis being performed</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;472</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> * which may not affect the entire analysis. If an exception occurs it will</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;473</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> * be included in the thrown exception collection.</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;474</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> *</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;475</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> * @throws ExceptionCollection a collections of any exceptions that occurred</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;476</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> * during analysis</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;477</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> */</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;478</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; <span class="keyword">public</span> <span class="keyword">void</span> analyzeDependencies() <span class="keyword">throws</span> ExceptionCollection {</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;479</td> <td class="nbHitsCovered">&nbsp;2</td> <td class="src"><pre class="src">&nbsp; <span class="keyword">final</span> List&lt;Throwable&gt; exceptions = Collections.synchronizedList(<span class="keyword">new</span> ArrayList&lt;Throwable&gt;());</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;480</td> <td class="nbHitsCovered">&nbsp;2</td> <td class="src"><pre class="src">&nbsp; <span class="keyword">boolean</span> autoUpdate = <span class="keyword">true</span>;</pre></td></tr>
<tr> <td class="numLine">&nbsp;481</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; <span class="keyword">try</span> {</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;482</td> <td class="nbHitsCovered">&nbsp;2</td> <td class="src"><pre class="src">&nbsp; autoUpdate = Settings.getBoolean(Settings.KEYS.AUTO_UPDATE);</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;483</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; } <span class="keyword">catch</span> (InvalidSettingException ex) {</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;484</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; LOGGER.debug(<span class="string">"Invalid setting for auto-update; using true."</span>);</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;485</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; exceptions.add(ex);</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;486</td> <td class="nbHitsCovered">&nbsp;2</td> <td class="src"><pre class="src">&nbsp; }</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;487</td> <td class="nbHitsUncovered"><a title="Line 487: Conditional coverage 50% (1/2).">&nbsp;2</a></td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp;<a title="Line 487: Conditional coverage 50% (1/2)."> <span class="keyword">if</span> (autoUpdate) {</a></span></pre></td></tr>
<tr> <td class="numLine">&nbsp;488</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; <span class="keyword">try</span> {</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;489</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; doUpdates();</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;490</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; } <span class="keyword">catch</span> (UpdateException ex) {</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;491</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; exceptions.add(ex);</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;492</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; LOGGER.warn(<span class="string">"Unable to update Cached Web DataSource, using local "</span></span></pre></td></tr>
<tr> <td class="numLine">&nbsp;493</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; + <span class="string">"data instead. Results may not include recent vulnerabilities."</span>);</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;494</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; LOGGER.debug(<span class="string">"Update Error"</span>, ex);</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;495</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; }</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;496</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; }</pre></td></tr>
<tr> <td class="numLine">&nbsp;497</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;</pre></td></tr>
<tr> <td class="numLine">&nbsp;498</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; <span class="comment">//need to ensure that data exists</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;499</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; <span class="keyword">try</span> {</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;500</td> <td class="nbHitsCovered">&nbsp;2</td> <td class="src"><pre class="src">&nbsp; ensureDataExists();</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;501</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; } <span class="keyword">catch</span> (NoDataException ex) {</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;502</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; throwFatalExceptionCollection(<span class="string">"Unable to continue dependency-check analysis."</span>, ex, exceptions);</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;503</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; } <span class="keyword">catch</span> (DatabaseException ex) {</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;504</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; throwFatalExceptionCollection(<span class="string">"Unable to connect to the dependency-check database."</span>, ex, exceptions);</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;505</td> <td class="nbHitsCovered">&nbsp;2</td> <td class="src"><pre class="src">&nbsp; }</pre></td></tr>
<tr> <td class="numLine">&nbsp;506</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;507</td> <td class="nbHitsCovered">&nbsp;2</td> <td class="src"><pre class="src">&nbsp; LOGGER.debug(<span class="string">"\n----------------------------------------------------\nBEGIN ANALYSIS\n----------------------------------------------------"</span>);</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;508</td> <td class="nbHitsCovered">&nbsp;2</td> <td class="src"><pre class="src">&nbsp; LOGGER.info(<span class="string">"Analysis Started"</span>);</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;509</td> <td class="nbHitsCovered">&nbsp;2</td> <td class="src"><pre class="src">&nbsp; <span class="keyword">final</span> <span class="keyword">long</span> analysisStart = System.currentTimeMillis();</pre></td></tr>
<tr> <td class="numLine">&nbsp;510</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;</pre></td></tr>
<tr> <td class="numLine">&nbsp;511</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; <span class="comment">// analysis phases</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;512</td> <td class="nbHitsCovered"><a title="Line 512: Conditional coverage 100% (2/2).">&nbsp;22</a></td> <td class="src"><pre class="src">&nbsp;<a title="Line 512: Conditional coverage 100% (2/2)."> <span class="keyword">for</span> (AnalysisPhase phase : AnalysisPhase.values()) {</a></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;513</td> <td class="nbHitsCovered">&nbsp;20</td> <td class="src"><pre class="src">&nbsp; <span class="keyword">final</span> List&lt;Analyzer&gt; analyzerList = analyzers.get(phase);</pre></td></tr>
<tr> <td class="numLine">&nbsp;514</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;515</td> <td class="nbHitsCovered"><a title="Line 515: Conditional coverage 100% (2/2).">&nbsp;20</a></td> <td class="src"><pre class="src">&nbsp;<a title="Line 515: Conditional coverage 100% (2/2)."> <span class="keyword">for</span> (<span class="keyword">final</span> Analyzer analyzer : analyzerList) {</a></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;516</td> <td class="nbHitsCovered">&nbsp;52</td> <td class="src"><pre class="src">&nbsp; <span class="keyword">final</span> <span class="keyword">long</span> analyzerStart = System.currentTimeMillis();</pre></td></tr>
<tr> <td class="numLine">&nbsp;517</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; <span class="keyword">try</span> {</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;518</td> <td class="nbHitsCovered">&nbsp;52</td> <td class="src"><pre class="src">&nbsp; initializeAnalyzer(analyzer);</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;519</td> <td class="nbHitsCovered">&nbsp;1</td> <td class="src"><pre class="src">&nbsp; } <span class="keyword">catch</span> (InitializationException ex) {</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;520</td> <td class="nbHitsCovered">&nbsp;1</td> <td class="src"><pre class="src">&nbsp; exceptions.add(ex);</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;521</td> <td class="nbHitsCovered">&nbsp;1</td> <td class="src"><pre class="src">&nbsp; <span class="keyword">continue</span>;</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;522</td> <td class="nbHitsCovered">&nbsp;51</td> <td class="src"><pre class="src">&nbsp; }</pre></td></tr>
<tr> <td class="numLine">&nbsp;523</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;524</td> <td class="nbHitsCovered">&nbsp;51</td> <td class="src"><pre class="src">&nbsp; executeAnalysisTasks(analyzer, exceptions);</pre></td></tr>
<tr> <td class="numLine">&nbsp;525</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;526</td> <td class="nbHitsCovered">&nbsp;51</td> <td class="src"><pre class="src">&nbsp; <span class="keyword">final</span> <span class="keyword">long</span> analyzerDurationMillis = System.currentTimeMillis() - analyzerStart;</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;527</td> <td class="nbHitsCovered">&nbsp;51</td> <td class="src"><pre class="src">&nbsp; <span class="keyword">final</span> <span class="keyword">long</span> analyzerDurationSeconds = TimeUnit.MILLISECONDS.toSeconds(analyzerDurationMillis);</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;528</td> <td class="nbHitsCovered">&nbsp;51</td> <td class="src"><pre class="src">&nbsp; LOGGER.info(<span class="string">"Finished {} ({} seconds)"</span>, analyzer.getName(), analyzerDurationSeconds);</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;529</td> <td class="nbHitsCovered">&nbsp;51</td> <td class="src"><pre class="src">&nbsp; }</pre></td></tr>
<tr> <td class="numLine">&nbsp;530</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; }</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;531</td> <td class="nbHitsCovered"><a title="Line 531: Conditional coverage 100% (2/2).">&nbsp;22</a></td> <td class="src"><pre class="src">&nbsp;<a title="Line 531: Conditional coverage 100% (2/2)."> <span class="keyword">for</span> (AnalysisPhase phase : AnalysisPhase.values()) {</a></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;532</td> <td class="nbHitsCovered">&nbsp;20</td> <td class="src"><pre class="src">&nbsp; <span class="keyword">final</span> List&lt;Analyzer&gt; analyzerList = analyzers.get(phase);</pre></td></tr>
<tr> <td class="numLine">&nbsp;533</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;534</td> <td class="nbHitsCovered"><a title="Line 534: Conditional coverage 100% (2/2).">&nbsp;20</a></td> <td class="src"><pre class="src">&nbsp;<a title="Line 534: Conditional coverage 100% (2/2)."> <span class="keyword">for</span> (Analyzer a : analyzerList) {</a></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;535</td> <td class="nbHitsCovered">&nbsp;52</td> <td class="src"><pre class="src">&nbsp; closeAnalyzer(a);</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;536</td> <td class="nbHitsCovered">&nbsp;52</td> <td class="src"><pre class="src">&nbsp; }</pre></td></tr>
<tr> <td class="numLine">&nbsp;537</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; }</pre></td></tr>
<tr> <td class="numLine">&nbsp;538</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;539</td> <td class="nbHitsCovered">&nbsp;2</td> <td class="src"><pre class="src">&nbsp; LOGGER.debug(<span class="string">"\n----------------------------------------------------\nEND ANALYSIS\n----------------------------------------------------"</span>);</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;540</td> <td class="nbHitsCovered">&nbsp;2</td> <td class="src"><pre class="src">&nbsp; <span class="keyword">final</span> <span class="keyword">long</span> analysisDurationSeconds = TimeUnit.MILLISECONDS.toSeconds(System.currentTimeMillis() - analysisStart);</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;541</td> <td class="nbHitsCovered">&nbsp;2</td> <td class="src"><pre class="src">&nbsp; LOGGER.info(<span class="string">"Analysis Complete ({} seconds)"</span>, analysisDurationSeconds);</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;542</td> <td class="nbHitsCovered"><a title="Line 542: Conditional coverage 100% (2/2).">&nbsp;2</a></td> <td class="src"><pre class="src">&nbsp;<a title="Line 542: Conditional coverage 100% (2/2)."> <span class="keyword">if</span> (exceptions.size() &gt; 0) {</a></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;543</td> <td class="nbHitsCovered">&nbsp;1</td> <td class="src"><pre class="src">&nbsp; <span class="keyword">throw</span> <span class="keyword">new</span> ExceptionCollection(<span class="string">"One or more exceptions occurred during dependency-check analysis"</span>, exceptions);</pre></td></tr>
<tr> <td class="numLine">&nbsp;544</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; }</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;545</td> <td class="nbHitsCovered">&nbsp;1</td> <td class="src"><pre class="src">&nbsp; }</pre></td></tr>
<tr> <td class="numLine">&nbsp;546</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;</pre></td></tr>
<tr> <td class="numLine">&nbsp;547</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; <span class="comment">/**</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;548</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> * Executes executes the analyzer using multiple threads.</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;549</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> *</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;550</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> * @param exceptions a collection of exceptions that occurred during</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;551</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> * analysis</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;552</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> * @param analyzer the analyzer to execute</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;553</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> * @throws ExceptionCollection thrown if exceptions occurred during analysis</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;554</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> */</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;555</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; <span class="keyword">void</span> executeAnalysisTasks(Analyzer analyzer, List&lt;Throwable&gt; exceptions) <span class="keyword">throws</span> ExceptionCollection {</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;556</td> <td class="nbHitsCovered">&nbsp;52</td> <td class="src"><pre class="src">&nbsp; LOGGER.debug(<span class="string">"Starting {}"</span>, analyzer.getName());</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;557</td> <td class="nbHitsCovered">&nbsp;52</td> <td class="src"><pre class="src">&nbsp; <span class="keyword">final</span> List&lt;AnalysisTask&gt; analysisTasks = getAnalysisTasks(analyzer, exceptions);</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;558</td> <td class="nbHitsCovered">&nbsp;52</td> <td class="src"><pre class="src">&nbsp; <span class="keyword">final</span> ExecutorService executorService = getExecutorService(analyzer);</pre></td></tr>
<tr> <td class="numLine">&nbsp;559</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;</pre></td></tr>
<tr> <td class="numLine">&nbsp;560</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; <span class="keyword">try</span> {</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;561</td> <td class="nbHitsCovered">&nbsp;52</td> <td class="src"><pre class="src">&nbsp; <span class="keyword">final</span> List&lt;Future&lt;Void&gt;&gt; results = executorService.invokeAll(analysisTasks, 10, TimeUnit.MINUTES);</pre></td></tr>
<tr> <td class="numLine">&nbsp;562</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;</pre></td></tr>
<tr> <td class="numLine">&nbsp;563</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; <span class="comment">// ensure there was no exception during execution</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;564</td> <td class="nbHitsCovered"><a title="Line 564: Conditional coverage 100% (2/2).">&nbsp;52</a></td> <td class="src"><pre class="src">&nbsp;<a title="Line 564: Conditional coverage 100% (2/2)."> <span class="keyword">for</span> (Future&lt;Void&gt; result : results) {</a></pre></td></tr>
<tr> <td class="numLine">&nbsp;565</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; <span class="keyword">try</span> {</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;566</td> <td class="nbHitsCovered">&nbsp;103</td> <td class="src"><pre class="src">&nbsp; result.get();</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;567</td> <td class="nbHitsCovered">&nbsp;1</td> <td class="src"><pre class="src">&nbsp; } <span class="keyword">catch</span> (ExecutionException e) {</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;568</td> <td class="nbHitsCovered">&nbsp;1</td> <td class="src"><pre class="src">&nbsp; throwFatalExceptionCollection(<span class="string">"Analysis task failed with a fatal exception."</span>, e, exceptions);</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;569</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; } <span class="keyword">catch</span> (CancellationException e) {</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;570</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; throwFatalExceptionCollection(<span class="string">"Analysis task timed out."</span>, e, exceptions);</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;571</td> <td class="nbHitsCovered">&nbsp;102</td> <td class="src"><pre class="src">&nbsp; }</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;572</td> <td class="nbHitsCovered">&nbsp;102</td> <td class="src"><pre class="src">&nbsp; }</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;573</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; } <span class="keyword">catch</span> (InterruptedException e) {</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;574</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; throwFatalExceptionCollection(<span class="string">"Analysis has been interrupted."</span>, e, exceptions);</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;575</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; } <span class="keyword">finally</span> {</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;576</td> <td class="nbHitsCovered">&nbsp;52</td> <td class="src"><pre class="src">&nbsp; executorService.shutdown();</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;577</td> <td class="nbHitsCovered">&nbsp;51</td> <td class="src"><pre class="src">&nbsp; }</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;578</td> <td class="nbHitsCovered">&nbsp;51</td> <td class="src"><pre class="src">&nbsp; }</pre></td></tr>
<tr> <td class="numLine">&nbsp;579</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;</pre></td></tr>
<tr> <td class="numLine">&nbsp;580</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; <span class="comment">/**</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;581</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> * Returns the analysis tasks for the dependencies.</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;582</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> *</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;583</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> * @param analyzer the analyzer to create tasks for</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;584</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> * @param exceptions the collection of exceptions to collect</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;585</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> * @return a collection of analysis tasks</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;586</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> */</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;587</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; List&lt;AnalysisTask&gt; getAnalysisTasks(Analyzer analyzer, List&lt;Throwable&gt; exceptions) {</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;588</td> <td class="nbHitsCovered">&nbsp;51</td> <td class="src"><pre class="src">&nbsp; <span class="keyword">final</span> List&lt;AnalysisTask&gt; result = <span class="keyword">new</span> ArrayList&lt;AnalysisTask&gt;();</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;589</td> <td class="nbHitsCovered">&nbsp;51</td> <td class="src"><pre class="src">&nbsp; <span class="keyword">synchronized</span> (dependencies) {</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;590</td> <td class="nbHitsCovered"><a title="Line 590: Conditional coverage 100% (2/2).">&nbsp;51</a></td> <td class="src"><pre class="src">&nbsp;<a title="Line 590: Conditional coverage 100% (2/2)."> <span class="keyword">for</span> (<span class="keyword">final</span> Dependency dependency : dependencies) {</a></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;591</td> <td class="nbHitsCovered">&nbsp;102</td> <td class="src"><pre class="src">&nbsp; <span class="keyword">final</span> AnalysisTask task = <span class="keyword">new</span> AnalysisTask(analyzer, dependency, <span class="keyword">this</span>, exceptions);</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;592</td> <td class="nbHitsCovered">&nbsp;102</td> <td class="src"><pre class="src">&nbsp; result.add(task);</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;593</td> <td class="nbHitsCovered">&nbsp;102</td> <td class="src"><pre class="src">&nbsp; }</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;594</td> <td class="nbHitsCovered">&nbsp;51</td> <td class="src"><pre class="src">&nbsp; }</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;595</td> <td class="nbHitsCovered">&nbsp;51</td> <td class="src"><pre class="src">&nbsp; <span class="keyword">return</span> result;</pre></td></tr>
<tr> <td class="numLine">&nbsp;596</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; }</pre></td></tr>
<tr> <td class="numLine">&nbsp;597</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;</pre></td></tr>
<tr> <td class="numLine">&nbsp;598</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; <span class="comment">/**</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;599</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> * Returns the executor service for a given analyzer.</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;600</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> *</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;601</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> * @param analyzer the analyzer to obtain an executor</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;602</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> * @return the executor service</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;603</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> */</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;604</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; ExecutorService getExecutorService(Analyzer analyzer) {</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;605</td> <td class="nbHitsCovered"><a title="Line 605: Conditional coverage 100% (2/2).">&nbsp;51</a></td> <td class="src"><pre class="src">&nbsp;<a title="Line 605: Conditional coverage 100% (2/2)."> <span class="keyword">if</span> (analyzer.supportsParallelProcessing()) {</a></pre></td></tr>
<tr> <td class="numLine">&nbsp;606</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; <span class="comment">// just a fair trade-off that should be reasonable for all analyzer types</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;607</td> <td class="nbHitsCovered">&nbsp;47</td> <td class="src"><pre class="src">&nbsp; <span class="keyword">final</span> <span class="keyword">int</span> maximumNumberOfThreads = 4 * Runtime.getRuntime().availableProcessors();</pre></td></tr>
<tr> <td class="numLine">&nbsp;608</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;609</td> <td class="nbHitsCovered">&nbsp;47</td> <td class="src"><pre class="src">&nbsp; LOGGER.debug(<span class="string">"Parallel processing with up to {} threads: {}."</span>, maximumNumberOfThreads, analyzer.getName());</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;610</td> <td class="nbHitsCovered">&nbsp;47</td> <td class="src"><pre class="src">&nbsp; <span class="keyword">return</span> Executors.newFixedThreadPool(maximumNumberOfThreads);</pre></td></tr>
<tr> <td class="numLine">&nbsp;611</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; } <span class="keyword">else</span> {</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;612</td> <td class="nbHitsCovered">&nbsp;4</td> <td class="src"><pre class="src">&nbsp; LOGGER.debug(<span class="string">"Parallel processing is not supported: {}."</span>, analyzer.getName());</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;613</td> <td class="nbHitsCovered">&nbsp;4</td> <td class="src"><pre class="src">&nbsp; <span class="keyword">return</span> Executors.newSingleThreadExecutor();</pre></td></tr>
<tr> <td class="numLine">&nbsp;614</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; }</pre></td></tr>
<tr> <td class="numLine">&nbsp;615</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; }</pre></td></tr>
<tr> <td class="numLine">&nbsp;616</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;</pre></td></tr>
<tr> <td class="numLine">&nbsp;617</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; <span class="comment">/**</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;618</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> * Initializes the given analyzer.</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;619</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> *</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;620</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> * @param analyzer the analyzer to initialize</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;621</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> * @return the initialized analyzer</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;622</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> * @throws InitializationException thrown when there is a problem</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;623</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> * initializing the analyzer</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;624</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> */</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;625</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; <span class="keyword">protected</span> Analyzer initializeAnalyzer(Analyzer analyzer) <span class="keyword">throws</span> InitializationException {</pre></td></tr>
<tr> <td class="numLine">&nbsp;626</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; <span class="keyword">try</span> {</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;627</td> <td class="nbHitsCovered">&nbsp;52</td> <td class="src"><pre class="src">&nbsp; LOGGER.debug(<span class="string">"Initializing {}"</span>, analyzer.getName());</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;628</td> <td class="nbHitsCovered">&nbsp;52</td> <td class="src"><pre class="src">&nbsp; analyzer.initialize();</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;629</td> <td class="nbHitsCovered">&nbsp;1</td> <td class="src"><pre class="src">&nbsp; } <span class="keyword">catch</span> (InitializationException ex) {</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;630</td> <td class="nbHitsCovered">&nbsp;1</td> <td class="src"><pre class="src">&nbsp; LOGGER.error(<span class="string">"Exception occurred initializing {}."</span>, analyzer.getName());</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;631</td> <td class="nbHitsCovered">&nbsp;1</td> <td class="src"><pre class="src">&nbsp; LOGGER.debug(<span class="string">""</span>, ex);</pre></td></tr>
<tr> <td class="numLine">&nbsp;632</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; <span class="keyword">try</span> {</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;633</td> <td class="nbHitsCovered">&nbsp;1</td> <td class="src"><pre class="src">&nbsp; analyzer.close();</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;634</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; } <span class="keyword">catch</span> (Throwable ex1) {</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;635</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; LOGGER.trace(<span class="string">""</span>, ex1);</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;636</td> <td class="nbHitsCovered">&nbsp;1</td> <td class="src"><pre class="src">&nbsp; }</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;637</td> <td class="nbHitsCovered">&nbsp;1</td> <td class="src"><pre class="src">&nbsp; <span class="keyword">throw</span> ex;</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;638</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; } <span class="keyword">catch</span> (Throwable ex) {</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;639</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; LOGGER.error(<span class="string">"Unexpected exception occurred initializing {}."</span>, analyzer.getName());</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;640</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; LOGGER.debug(<span class="string">""</span>, ex);</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;641</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; <span class="keyword">try</span> {</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;642</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; analyzer.close();</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;643</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; } <span class="keyword">catch</span> (Throwable ex1) {</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;644</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; LOGGER.trace(<span class="string">""</span>, ex1);</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;645</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; }</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;646</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; <span class="keyword">throw</span> <span class="keyword">new</span> InitializationException(<span class="string">"Unexpected Exception"</span>, ex);</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;647</td> <td class="nbHitsCovered">&nbsp;51</td> <td class="src"><pre class="src">&nbsp; }</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;648</td> <td class="nbHitsCovered">&nbsp;51</td> <td class="src"><pre class="src">&nbsp; <span class="keyword">return</span> analyzer;</pre></td></tr>
<tr> <td class="numLine">&nbsp;649</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; }</pre></td></tr>
<tr> <td class="numLine">&nbsp;650</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;</pre></td></tr>
<tr> <td class="numLine">&nbsp;651</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; <span class="comment">/**</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;652</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> * Closes the given analyzer.</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;653</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> *</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;654</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> * @param analyzer the analyzer to close</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;655</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> */</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;656</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; <span class="keyword">protected</span> <span class="keyword">void</span> closeAnalyzer(Analyzer analyzer) {</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;657</td> <td class="nbHitsCovered">&nbsp;52</td> <td class="src"><pre class="src">&nbsp; LOGGER.debug(<span class="string">"Closing Analyzer '{}'"</span>, analyzer.getName());</pre></td></tr>
<tr> <td class="numLine">&nbsp;658</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; <span class="keyword">try</span> {</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;659</td> <td class="nbHitsCovered">&nbsp;52</td> <td class="src"><pre class="src">&nbsp; analyzer.close();</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;660</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; } <span class="keyword">catch</span> (Throwable ex) {</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;661</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; LOGGER.trace(<span class="string">""</span>, ex);</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;662</td> <td class="nbHitsCovered">&nbsp;52</td> <td class="src"><pre class="src">&nbsp; }</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;663</td> <td class="nbHitsCovered">&nbsp;52</td> <td class="src"><pre class="src">&nbsp; }</pre></td></tr>
<tr> <td class="numLine">&nbsp;664</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;</pre></td></tr>
<tr> <td class="numLine">&nbsp;665</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; <span class="comment">/**</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;666</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> * Cycles through the cached web data sources and calls update on all of</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;667</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> * them.</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;668</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> *</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;669</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> * @throws UpdateException thrown if the operation fails</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;670</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> */</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;671</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; <span class="keyword">public</span> <span class="keyword">void</span> doUpdates() <span class="keyword">throws</span> UpdateException {</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;672</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; LOGGER.info(<span class="string">"Checking for updates"</span>);</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;673</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; <span class="keyword">final</span> <span class="keyword">long</span> updateStart = System.currentTimeMillis();</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;674</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; <span class="keyword">final</span> UpdateService service = <span class="keyword">new</span> UpdateService(serviceClassLoader);</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;675</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; <span class="keyword">final</span> Iterator&lt;CachedWebDataSource&gt; iterator = service.getDataSources();</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;676</td> <td class="nbHitsUncovered"><a title="Line 676: Conditional coverage 0% (0/2).">&nbsp;0</a></td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp;<a title="Line 676: Conditional coverage 0% (0/2)."> <span class="keyword">while</span> (iterator.hasNext()) {</a></span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;677</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; <span class="keyword">final</span> CachedWebDataSource source = iterator.next();</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;678</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; source.update();</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;679</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; }</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;680</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; LOGGER.info(<span class="string">"Check for updates complete ({} ms)"</span>, System.currentTimeMillis() - updateStart);</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;681</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; }</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;682</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;</pre></td></tr>
<tr> <td class="numLine">&nbsp;683</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; <span class="comment">/**</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;684</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> * Returns a full list of all of the analyzers. This is useful for reporting</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;685</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> * which analyzers where used.</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;686</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> *</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;687</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> * @return a list of Analyzers</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;688</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> */</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;689</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; <span class="keyword">public</span> List&lt;Analyzer&gt; getAnalyzers() {</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;690</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; <span class="keyword">final</span> List&lt;Analyzer&gt; ret = <span class="keyword">new</span> ArrayList&lt;Analyzer&gt;();</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;691</td> <td class="nbHitsUncovered"><a title="Line 691: Conditional coverage 0% (0/2).">&nbsp;0</a></td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp;<a title="Line 691: Conditional coverage 0% (0/2)."> <span class="keyword">for</span> (AnalysisPhase phase : AnalysisPhase.values()) {</a></span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;692</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; <span class="keyword">final</span> List&lt;Analyzer&gt; analyzerList = analyzers.get(phase);</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;693</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; ret.addAll(analyzerList);</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;694</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; }</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;695</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; <span class="keyword">return</span> ret;</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;696</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; }</pre></td></tr>
<tr> <td class="numLine">&nbsp;697</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;</pre></td></tr>
<tr> <td class="numLine">&nbsp;698</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; <span class="comment">/**</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;699</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> * Checks all analyzers to see if an extension is supported.</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;700</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> *</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;701</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> * @param file a file extension</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;702</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> * @return true or false depending on whether or not the file extension is</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;703</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> * supported</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;704</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> */</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;705</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; @Override</pre></td></tr>
<tr> <td class="numLine">&nbsp;706</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; <span class="keyword">public</span> <span class="keyword">boolean</span> accept(File file) {</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;707</td> <td class="nbHitsUncovered"><a title="Line 707: Conditional coverage 50% (1/2).">&nbsp;858</a></td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp;<a title="Line 707: Conditional coverage 50% (1/2)."> <span class="keyword">if</span> (file == <span class="keyword">null</span>) {</a></span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;708</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; <span class="keyword">return</span> <span class="keyword">false</span>;</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;709</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; }</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;710</td> <td class="nbHitsCovered">&nbsp;858</td> <td class="src"><pre class="src">&nbsp; <span class="keyword">boolean</span> scan = <span class="keyword">false</span>;</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;711</td> <td class="nbHitsCovered"><a title="Line 711: Conditional coverage 100% (2/2).">&nbsp;858</a></td> <td class="src"><pre class="src">&nbsp;<a title="Line 711: Conditional coverage 100% (2/2)."> <span class="keyword">for</span> (FileTypeAnalyzer a : <span class="keyword">this</span>.fileTypeAnalyzers) {</a></pre></td></tr>
<tr> <td class="numLine">&nbsp;712</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; <span class="comment">/* note, we can't break early on this loop as the analyzers need to know if</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;713</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> they have files to work on prior to initialization */</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;714</td> <td class="nbHitsCovered">&nbsp;15447</td> <td class="src"><pre class="src">&nbsp; scan |= a.accept(file);</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;715</td> <td class="nbHitsCovered">&nbsp;15447</td> <td class="src"><pre class="src">&nbsp; }</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;716</td> <td class="nbHitsCovered">&nbsp;858</td> <td class="src"><pre class="src">&nbsp; <span class="keyword">return</span> scan;</pre></td></tr>
<tr> <td class="numLine">&nbsp;717</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; }</pre></td></tr>
<tr> <td class="numLine">&nbsp;718</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;</pre></td></tr>
<tr> <td class="numLine">&nbsp;719</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; <span class="comment">/**</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;720</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> * Returns the set of file type analyzers.</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;721</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> *</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;722</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> * @return the set of file type analyzers</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;723</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> */</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;724</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; <span class="keyword">public</span> Set&lt;FileTypeAnalyzer&gt; getFileTypeAnalyzers() {</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;725</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; <span class="keyword">return</span> <span class="keyword">this</span>.fileTypeAnalyzers;</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;726</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; }</pre></td></tr>
<tr> <td class="numLine">&nbsp;727</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;</pre></td></tr>
<tr> <td class="numLine">&nbsp;728</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; <span class="comment">/**</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;729</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> * Adds a file type analyzer. This has been added solely to assist in unit</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;730</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> * testing the Engine.</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;731</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> *</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;732</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> * @param fta the file type analyzer to add</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;733</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> */</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;734</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; <span class="keyword">protected</span> <span class="keyword">void</span> addFileTypeAnalyzer(FileTypeAnalyzer fta) {</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;735</td> <td class="nbHitsCovered">&nbsp;1</td> <td class="src"><pre class="src">&nbsp; <span class="keyword">this</span>.fileTypeAnalyzers.add(fta);</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;736</td> <td class="nbHitsCovered">&nbsp;1</td> <td class="src"><pre class="src">&nbsp; }</pre></td></tr>
<tr> <td class="numLine">&nbsp;737</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;</pre></td></tr>
<tr> <td class="numLine">&nbsp;738</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; <span class="comment">/**</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;739</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> * Checks the CPE Index to ensure documents exists. If none exist a</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;740</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> * NoDataException is thrown.</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;741</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> *</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;742</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> * @throws NoDataException thrown if no data exists in the CPE Index</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;743</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> * @throws DatabaseException thrown if there is an exception opening the</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;744</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> * database</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;745</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> */</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;746</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; <span class="keyword">private</span> <span class="keyword">void</span> ensureDataExists() <span class="keyword">throws</span> NoDataException, DatabaseException {</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;747</td> <td class="nbHitsCovered">&nbsp;2</td> <td class="src"><pre class="src">&nbsp; <span class="keyword">final</span> CveDB cve = <span class="keyword">new</span> CveDB();</pre></td></tr>
<tr> <td class="numLine">&nbsp;748</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; <span class="keyword">try</span> {</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;749</td> <td class="nbHitsCovered">&nbsp;2</td> <td class="src"><pre class="src">&nbsp; cve.open();</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;750</td> <td class="nbHitsUncovered"><a title="Line 750: Conditional coverage 50% (1/2).">&nbsp;2</a></td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp;<a title="Line 750: Conditional coverage 50% (1/2)."> <span class="keyword">if</span> (!cve.dataExists()) {</a></span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;751</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; <span class="keyword">throw</span> <span class="keyword">new</span> NoDataException(<span class="string">"No documents exist"</span>);</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;752</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; }</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;753</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; } <span class="keyword">catch</span> (DatabaseException ex) {</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;754</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; <span class="keyword">throw</span> <span class="keyword">new</span> NoDataException(ex.getMessage(), ex);</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;755</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; } <span class="keyword">finally</span> {</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;756</td> <td class="nbHitsCovered">&nbsp;2</td> <td class="src"><pre class="src">&nbsp; cve.close();</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;757</td> <td class="nbHitsCovered">&nbsp;2</td> <td class="src"><pre class="src">&nbsp; }</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;758</td> <td class="nbHitsCovered">&nbsp;2</td> <td class="src"><pre class="src">&nbsp; }</pre></td></tr>
<tr> <td class="numLine">&nbsp;759</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;</pre></td></tr>
<tr> <td class="numLine">&nbsp;760</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; <span class="comment">/**</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;761</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> * Constructs and throws a fatal exception collection.</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;762</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> *</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;763</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> * @param message the exception message</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;764</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> * @param throwable the cause</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;765</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> * @param exceptions a collection of exception to include</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;766</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> * @throws ExceptionCollection a collection of exceptions that occurred</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;767</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> * during analysis</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;768</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> */</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;769</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; <span class="keyword">private</span> <span class="keyword">void</span> throwFatalExceptionCollection(String message, Throwable throwable, List&lt;Throwable&gt; exceptions) <span class="keyword">throws</span> ExceptionCollection {</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;770</td> <td class="nbHitsCovered">&nbsp;1</td> <td class="src"><pre class="src">&nbsp; LOGGER.error(<span class="string">"{}\n\n{}"</span>, throwable.getMessage(), message);</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;771</td> <td class="nbHitsCovered">&nbsp;1</td> <td class="src"><pre class="src">&nbsp; LOGGER.debug(<span class="string">""</span>, throwable);</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;772</td> <td class="nbHitsCovered">&nbsp;1</td> <td class="src"><pre class="src">&nbsp; exceptions.add(throwable);</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;773</td> <td class="nbHitsCovered">&nbsp;1</td> <td class="src"><pre class="src">&nbsp; <span class="keyword">throw</span> <span class="keyword">new</span> ExceptionCollection(message, exceptions, <span class="keyword">true</span>);</pre></td></tr>
<tr> <td class="numLine">&nbsp;774</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; }</pre></td></tr>
<tr> <td class="numLine">&nbsp;775</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;}</pre></td></tr>
</table>
<div class="footer">Report generated by <a href="http://cobertura.sourceforge.net/" target="_top">Cobertura</a> 2.1.1 on 11/5/16 7:41 AM.</div>
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