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version 1.2.2 of project documentation

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Jeremy Long
2014-06-24 07:28:27 -04:00
parent 4f12190a63
commit f79d7926fb
975 changed files with 35425 additions and 19463 deletions
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dependency-check-core/cobertura/org.owasp.dependencycheck.analyzer.ArchiveAnalyzer.html
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@@ -143,7 +143,7 @@
<td class="src"><pre class="src">&nbsp;<span class="comment"> * The logger.</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;63</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> */</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;64</td> <td class="nbHitsCovered">&nbsp;1</td> <td class="src"><pre class="src">&nbsp; <span class="keyword">private</span> <span class="keyword">static</span> <span class="keyword">final</span> Logger LOGGER = Logger.getLogger(ArchiveAnalyzer.<span class="keyword">class</span>.getName());</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;64</td> <td class="nbHitsCovered">&nbsp;2</td> <td class="src"><pre class="src">&nbsp; <span class="keyword">private</span> <span class="keyword">static</span> <span class="keyword">final</span> Logger LOGGER = Logger.getLogger(ArchiveAnalyzer.<span class="keyword">class</span>.getName());</pre></td></tr>
<tr> <td class="numLine">&nbsp;65</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; <span class="comment">/**</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;66</td> <td class="nbHits">&nbsp;</td>
@@ -158,7 +158,7 @@
<td class="src"><pre class="src">&nbsp;<span class="comment"> * The count of directories created during analysis. This is used for creating temporary directories.</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;71</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> */</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;72</td> <td class="nbHitsCovered">&nbsp;1</td> <td class="src"><pre class="src">&nbsp; <span class="keyword">private</span> <span class="keyword">static</span> <span class="keyword">int</span> dirCount = 0;</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;72</td> <td class="nbHitsCovered">&nbsp;2</td> <td class="src"><pre class="src">&nbsp; <span class="keyword">private</span> <span class="keyword">static</span> <span class="keyword">int</span> dirCount = 0;</pre></td></tr>
<tr> <td class="numLine">&nbsp;73</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; <span class="comment">/**</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;74</td> <td class="nbHits">&nbsp;</td>
@@ -173,7 +173,7 @@
<td class="src"><pre class="src">&nbsp;<span class="comment"> * The max scan depth that the analyzer will recursively extract nested archives.</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;79</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> */</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;80</td> <td class="nbHitsCovered">&nbsp;1</td> <td class="src"><pre class="src">&nbsp; <span class="keyword">private</span> <span class="keyword">static</span> <span class="keyword">final</span> <span class="keyword">int</span> MAX_SCAN_DEPTH = Settings.getInt(<span class="string">"archive.scan.depth"</span>, 3);</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;80</td> <td class="nbHitsCovered">&nbsp;2</td> <td class="src"><pre class="src">&nbsp; <span class="keyword">private</span> <span class="keyword">static</span> <span class="keyword">final</span> <span class="keyword">int</span> MAX_SCAN_DEPTH = Settings.getInt(<span class="string">"archive.scan.depth"</span>, 3);</pre></td></tr>
<tr> <td class="numLine">&nbsp;81</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; <span class="comment">/**</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;82</td> <td class="nbHits">&nbsp;</td>
@@ -200,14 +200,14 @@
<td class="src"><pre class="src">&nbsp;<span class="comment"> * The phase that this analyzer is intended to run in.</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;93</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> */</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;94</td> <td class="nbHitsCovered">&nbsp;1</td> <td class="src"><pre class="src">&nbsp; <span class="keyword">private</span> <span class="keyword">static</span> <span class="keyword">final</span> AnalysisPhase ANALYSIS_PHASE = AnalysisPhase.INITIAL;</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;94</td> <td class="nbHitsCovered">&nbsp;2</td> <td class="src"><pre class="src">&nbsp; <span class="keyword">private</span> <span class="keyword">static</span> <span class="keyword">final</span> AnalysisPhase ANALYSIS_PHASE = AnalysisPhase.INITIAL;</pre></td></tr>
<tr> <td class="numLine">&nbsp;95</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; <span class="comment">/**</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;96</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> * The set of things we can handle with Zip methods</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;97</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> */</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;98</td> <td class="nbHitsCovered">&nbsp;1</td> <td class="src"><pre class="src">&nbsp; <span class="keyword">private</span> <span class="keyword">static</span> <span class="keyword">final</span> Set&lt;String&gt; ZIPPABLES = newHashSet(<span class="string">"zip"</span>, <span class="string">"ear"</span>, <span class="string">"war"</span>, <span class="string">"jar"</span>, <span class="string">"sar"</span>, <span class="string">"apk"</span>, <span class="string">"nupkg"</span>);</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;98</td> <td class="nbHitsCovered">&nbsp;2</td> <td class="src"><pre class="src">&nbsp; <span class="keyword">private</span> <span class="keyword">static</span> <span class="keyword">final</span> Set&lt;String&gt; ZIPPABLES = newHashSet(<span class="string">"zip"</span>, <span class="string">"ear"</span>, <span class="string">"war"</span>, <span class="string">"jar"</span>, <span class="string">"sar"</span>, <span class="string">"apk"</span>, <span class="string">"nupkg"</span>);</pre></td></tr>
<tr> <td class="numLine">&nbsp;99</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; <span class="comment">/**</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;100</td> <td class="nbHits">&nbsp;</td>
@@ -216,7 +216,7 @@
<td class="src"><pre class="src">&nbsp;<span class="comment"> * to be explicitly handled in extractFiles().</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;102</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> */</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;103</td> <td class="nbHitsCovered">&nbsp;1</td> <td class="src"><pre class="src">&nbsp; <span class="keyword">private</span> <span class="keyword">static</span> <span class="keyword">final</span> Set&lt;String&gt; EXTENSIONS = newHashSet(<span class="string">"tar"</span>, <span class="string">"gz"</span>, <span class="string">"tgz"</span>);</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;103</td> <td class="nbHitsCovered">&nbsp;2</td> <td class="src"><pre class="src">&nbsp; <span class="keyword">private</span> <span class="keyword">static</span> <span class="keyword">final</span> Set&lt;String&gt; EXTENSIONS = newHashSet(<span class="string">"tar"</span>, <span class="string">"gz"</span>, <span class="string">"tgz"</span>);</pre></td></tr>
<tr> <td class="numLine">&nbsp;104</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;</pre></td></tr>
<tr> <td class="numLine">&nbsp;105</td> <td class="nbHits">&nbsp;</td>
@@ -225,19 +225,19 @@
<td class="src"><pre class="src">&nbsp;<span class="comment"> * The set of file extensions to remove from the engine's collection of dependencies.</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;107</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> */</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;108</td> <td class="nbHitsCovered">&nbsp;1</td> <td class="src"><pre class="src">&nbsp; <span class="keyword">private</span> <span class="keyword">static</span> <span class="keyword">final</span> Set&lt;String&gt; REMOVE_FROM_ANALYSIS = newHashSet(<span class="string">"zip"</span>, <span class="string">"tar"</span>, <span class="string">"gz"</span>, <span class="string">"tgz"</span>); <span class="comment">//TODO add nupkg, apk, sar?</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;108</td> <td class="nbHitsCovered">&nbsp;2</td> <td class="src"><pre class="src">&nbsp; <span class="keyword">private</span> <span class="keyword">static</span> <span class="keyword">final</span> Set&lt;String&gt; REMOVE_FROM_ANALYSIS = newHashSet(<span class="string">"zip"</span>, <span class="string">"tar"</span>, <span class="string">"gz"</span>, <span class="string">"tgz"</span>); <span class="comment">//TODO add nupkg, apk, sar?</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;109</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;</pre></td></tr>
<tr> <td class="numLine">&nbsp;110</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; <span class="keyword">static</span> {</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;111</td> <td class="nbHitsCovered">&nbsp;1</td> <td class="src"><pre class="src">&nbsp; <span class="keyword">final</span> String additionalZipExt = Settings.getString(Settings.KEYS.ADDITIONAL_ZIP_EXTENSIONS);</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;112</td> <td class="nbHitsCovered">&nbsp;1</td> <td class="src"><pre class="src">&nbsp; <span class="keyword">if</span> (additionalZipExt != <span class="keyword">null</span>) {</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;111</td> <td class="nbHitsCovered">&nbsp;2</td> <td class="src"><pre class="src">&nbsp; <span class="keyword">final</span> String additionalZipExt = Settings.getString(Settings.KEYS.ADDITIONAL_ZIP_EXTENSIONS);</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;112</td> <td class="nbHitsCovered">&nbsp;2</td> <td class="src"><pre class="src">&nbsp; <span class="keyword">if</span> (additionalZipExt != <span class="keyword">null</span>) {</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;113</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; <span class="keyword">final</span> HashSet ext = <span class="keyword">new</span> HashSet&lt;String&gt;(Arrays.asList(additionalZipExt));</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;114</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; ZIPPABLES.addAll(ext);</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;115</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; }</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;116</td> <td class="nbHitsCovered">&nbsp;1</td> <td class="src"><pre class="src">&nbsp; EXTENSIONS.addAll(ZIPPABLES);</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;117</td> <td class="nbHitsCovered">&nbsp;1</td> <td class="src"><pre class="src">&nbsp; }</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;116</td> <td class="nbHitsCovered">&nbsp;2</td> <td class="src"><pre class="src">&nbsp; EXTENSIONS.addAll(ZIPPABLES);</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;117</td> <td class="nbHitsCovered">&nbsp;2</td> <td class="src"><pre class="src">&nbsp; }</pre></td></tr>
<tr> <td class="numLine">&nbsp;118</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;</pre></td></tr>
<tr> <td class="numLine">&nbsp;119</td> <td class="nbHits">&nbsp;</td>
@@ -254,7 +254,7 @@
<td class="src"><pre class="src">&nbsp; @Override</pre></td></tr>
<tr> <td class="numLine">&nbsp;125</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; <span class="keyword">public</span> Set&lt;String&gt; getSupportedExtensions() {</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;126</td> <td class="nbHitsCovered">&nbsp;850</td> <td class="src"><pre class="src">&nbsp; <span class="keyword">return</span> EXTENSIONS;</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;126</td> <td class="nbHitsCovered">&nbsp;1700</td> <td class="src"><pre class="src">&nbsp; <span class="keyword">return</span> EXTENSIONS;</pre></td></tr>
<tr> <td class="numLine">&nbsp;127</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; }</pre></td></tr>
<tr> <td class="numLine">&nbsp;128</td> <td class="nbHits">&nbsp;</td>
@@ -273,7 +273,7 @@
<td class="src"><pre class="src">&nbsp; @Override</pre></td></tr>
<tr> <td class="numLine">&nbsp;135</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; <span class="keyword">public</span> String getName() {</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;136</td> <td class="nbHitsCovered">&nbsp;4</td> <td class="src"><pre class="src">&nbsp; <span class="keyword">return</span> ANALYZER_NAME;</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;136</td> <td class="nbHitsCovered">&nbsp;8</td> <td class="src"><pre class="src">&nbsp; <span class="keyword">return</span> ANALYZER_NAME;</pre></td></tr>
<tr> <td class="numLine">&nbsp;137</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; }</pre></td></tr>
<tr> <td class="numLine">&nbsp;138</td> <td class="nbHits">&nbsp;</td>
@@ -292,7 +292,7 @@
<td class="src"><pre class="src">&nbsp; @Override</pre></td></tr>
<tr> <td class="numLine">&nbsp;145</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; <span class="keyword">public</span> AnalysisPhase getAnalysisPhase() {</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;146</td> <td class="nbHitsCovered">&nbsp;1</td> <td class="src"><pre class="src">&nbsp; <span class="keyword">return</span> ANALYSIS_PHASE;</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;146</td> <td class="nbHitsCovered">&nbsp;2</td> <td class="src"><pre class="src">&nbsp; <span class="keyword">return</span> ANALYSIS_PHASE;</pre></td></tr>
<tr> <td class="numLine">&nbsp;147</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; }</pre></td></tr>
<tr> <td class="numLine">&nbsp;148</td> <td class="nbHits">&nbsp;</td>
@@ -313,7 +313,7 @@
<td class="src"><pre class="src">&nbsp; @Override</pre></td></tr>
<tr> <td class="numLine">&nbsp;156</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; <span class="keyword">protected</span> String getAnalyzerEnabledSettingKey() {</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;157</td> <td class="nbHitsCovered">&nbsp;2</td> <td class="src"><pre class="src">&nbsp; <span class="keyword">return</span> Settings.KEYS.ANALYZER_ARCHIVE_ENABLED;</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;157</td> <td class="nbHitsCovered">&nbsp;4</td> <td class="src"><pre class="src">&nbsp; <span class="keyword">return</span> Settings.KEYS.ANALYZER_ARCHIVE_ENABLED;</pre></td></tr>
<tr> <td class="numLine">&nbsp;158</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; }</pre></td></tr>
<tr> <td class="numLine">&nbsp;159</td> <td class="nbHits">&nbsp;</td>
@@ -332,19 +332,19 @@
<td class="src"><pre class="src">&nbsp; @Override</pre></td></tr>
<tr> <td class="numLine">&nbsp;166</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; <span class="keyword">public</span> <span class="keyword">void</span> initializeFileTypeAnalyzer() <span class="keyword">throws</span> Exception {</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;167</td> <td class="nbHitsCovered">&nbsp;1</td> <td class="src"><pre class="src">&nbsp; <span class="keyword">final</span> File baseDir = Settings.getTempDirectory();</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;168</td> <td class="nbHitsCovered">&nbsp;1</td> <td class="src"><pre class="src">&nbsp; tempFileLocation = File.createTempFile(<span class="string">"check"</span>, <span class="string">"tmp"</span>, baseDir);</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;169</td> <td class="nbHitsUncovered"><a title="Line 169: Conditional coverage 50% (1/2).">&nbsp;1</a></td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp;<a title="Line 169: Conditional coverage 50% (1/2)."> <span class="keyword">if</span> (!tempFileLocation.delete()) {</a></span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;167</td> <td class="nbHitsCovered">&nbsp;2</td> <td class="src"><pre class="src">&nbsp; <span class="keyword">final</span> File baseDir = Settings.getTempDirectory();</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;168</td> <td class="nbHitsCovered">&nbsp;2</td> <td class="src"><pre class="src">&nbsp; tempFileLocation = File.createTempFile(<span class="string">"check"</span>, <span class="string">"tmp"</span>, baseDir);</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;169</td> <td class="nbHitsUncovered"><a title="Line 169: Conditional coverage 50% (1/2).">&nbsp;2</a></td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp;<a title="Line 169: Conditional coverage 50% (1/2)."> <span class="keyword">if</span> (!tempFileLocation.delete()) {</a></span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;170</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; <span class="keyword">final</span> String msg = String.format(<span class="string">"Unable to delete temporary file '%s'."</span>, tempFileLocation.getAbsolutePath());</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;171</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; <span class="keyword">throw</span> <span class="keyword">new</span> AnalysisException(msg);</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;172</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; }</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;173</td> <td class="nbHitsUncovered"><a title="Line 173: Conditional coverage 50% (1/2).">&nbsp;1</a></td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp;<a title="Line 173: Conditional coverage 50% (1/2)."> <span class="keyword">if</span> (!tempFileLocation.mkdirs()) {</a></span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;173</td> <td class="nbHitsUncovered"><a title="Line 173: Conditional coverage 50% (1/2).">&nbsp;2</a></td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp;<a title="Line 173: Conditional coverage 50% (1/2)."> <span class="keyword">if</span> (!tempFileLocation.mkdirs()) {</a></span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;174</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; <span class="keyword">final</span> String msg = String.format(<span class="string">"Unable to create directory '%s'."</span>, tempFileLocation.getAbsolutePath());</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;175</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; <span class="keyword">throw</span> <span class="keyword">new</span> AnalysisException(msg);</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;176</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; }</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;177</td> <td class="nbHitsCovered">&nbsp;1</td> <td class="src"><pre class="src">&nbsp; }</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;177</td> <td class="nbHitsCovered">&nbsp;2</td> <td class="src"><pre class="src">&nbsp; }</pre></td></tr>
<tr> <td class="numLine">&nbsp;178</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;</pre></td></tr>
<tr> <td class="numLine">&nbsp;179</td> <td class="nbHits">&nbsp;</td>
@@ -361,16 +361,16 @@
<td class="src"><pre class="src">&nbsp; @Override</pre></td></tr>
<tr> <td class="numLine">&nbsp;185</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; <span class="keyword">public</span> <span class="keyword">void</span> close() <span class="keyword">throws</span> Exception {</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;186</td> <td class="nbHitsUncovered"><a title="Line 186: Conditional coverage 50% (2/4) [each condition: 50%, 50%].">&nbsp;1</a></td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp;<a title="Line 186: Conditional coverage 50% (2/4) [each condition: 50%, 50%]."> <span class="keyword">if</span> (tempFileLocation != <span class="keyword">null</span> &amp;&amp; tempFileLocation.exists()) {</a></span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;187</td> <td class="nbHitsCovered">&nbsp;1</td> <td class="src"><pre class="src">&nbsp; LOGGER.log(Level.FINE, <span class="string">"Attempting to delete temporary files"</span>);</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;188</td> <td class="nbHitsCovered">&nbsp;1</td> <td class="src"><pre class="src">&nbsp; <span class="keyword">final</span> <span class="keyword">boolean</span> success = FileUtils.delete(tempFileLocation);</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;189</td> <td class="nbHitsUncovered"><a title="Line 189: Conditional coverage 16% (1/6) [each condition: 50%, 0%, 0%].">&nbsp;1</a></td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp;<a title="Line 189: Conditional coverage 16% (1/6) [each condition: 50%, 0%, 0%]."> <span class="keyword">if</span> (!success &amp;&amp; tempFileLocation != <span class="keyword">null</span> &amp; tempFileLocation.exists()) {</a></span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;186</td> <td class="nbHitsUncovered"><a title="Line 186: Conditional coverage 50% (2/4) [each condition: 50%, 50%].">&nbsp;2</a></td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp;<a title="Line 186: Conditional coverage 50% (2/4) [each condition: 50%, 50%]."> <span class="keyword">if</span> (tempFileLocation != <span class="keyword">null</span> &amp;&amp; tempFileLocation.exists()) {</a></span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;187</td> <td class="nbHitsCovered">&nbsp;2</td> <td class="src"><pre class="src">&nbsp; LOGGER.log(Level.FINE, <span class="string">"Attempting to delete temporary files"</span>);</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;188</td> <td class="nbHitsCovered">&nbsp;2</td> <td class="src"><pre class="src">&nbsp; <span class="keyword">final</span> <span class="keyword">boolean</span> success = FileUtils.delete(tempFileLocation);</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;189</td> <td class="nbHitsUncovered"><a title="Line 189: Conditional coverage 16% (1/6) [each condition: 50%, 0%, 0%].">&nbsp;2</a></td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp;<a title="Line 189: Conditional coverage 16% (1/6) [each condition: 50%, 0%, 0%]."> <span class="keyword">if</span> (!success &amp;&amp; tempFileLocation != <span class="keyword">null</span> &amp; tempFileLocation.exists()) {</a></span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;190</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; LOGGER.log(Level.WARNING, <span class="string">"Failed to delete some temporary files, see the log for more details"</span>);</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;191</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; }</pre></td></tr>
<tr> <td class="numLine">&nbsp;192</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; }</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;193</td> <td class="nbHitsCovered">&nbsp;1</td> <td class="src"><pre class="src">&nbsp; }</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;193</td> <td class="nbHitsCovered">&nbsp;2</td> <td class="src"><pre class="src">&nbsp; }</pre></td></tr>
<tr> <td class="numLine">&nbsp;194</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;</pre></td></tr>
<tr> <td class="numLine">&nbsp;195</td> <td class="nbHits">&nbsp;</td>
@@ -393,17 +393,17 @@
<td class="src"><pre class="src">&nbsp; @Override</pre></td></tr>
<tr> <td class="numLine">&nbsp;204</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; <span class="keyword">public</span> <span class="keyword">void</span> analyzeFileType(Dependency dependency, Engine engine) <span class="keyword">throws</span> AnalysisException {</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;205</td> <td class="nbHitsCovered">&nbsp;2</td> <td class="src"><pre class="src">&nbsp; <span class="keyword">final</span> File f = <span class="keyword">new</span> File(dependency.getActualFilePath());</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;206</td> <td class="nbHitsCovered">&nbsp;2</td> <td class="src"><pre class="src">&nbsp; <span class="keyword">final</span> File tmpDir = getNextTempDirectory();</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;207</td> <td class="nbHitsCovered">&nbsp;2</td> <td class="src"><pre class="src">&nbsp; extractFiles(f, tmpDir, engine);</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;205</td> <td class="nbHitsCovered">&nbsp;4</td> <td class="src"><pre class="src">&nbsp; <span class="keyword">final</span> File f = <span class="keyword">new</span> File(dependency.getActualFilePath());</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;206</td> <td class="nbHitsCovered">&nbsp;4</td> <td class="src"><pre class="src">&nbsp; <span class="keyword">final</span> File tmpDir = getNextTempDirectory();</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;207</td> <td class="nbHitsCovered">&nbsp;4</td> <td class="src"><pre class="src">&nbsp; extractFiles(f, tmpDir, engine);</pre></td></tr>
<tr> <td class="numLine">&nbsp;208</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;</pre></td></tr>
<tr> <td class="numLine">&nbsp;209</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; <span class="comment">//make a copy</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;210</td> <td class="nbHitsCovered">&nbsp;2</td> <td class="src"><pre class="src">&nbsp; List&lt;Dependency&gt; dependencies = <span class="keyword">new</span> ArrayList&lt;Dependency&gt;(engine.getDependencies());</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;211</td> <td class="nbHitsCovered">&nbsp;2</td> <td class="src"><pre class="src">&nbsp; engine.scan(tmpDir);</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;212</td> <td class="nbHitsCovered">&nbsp;2</td> <td class="src"><pre class="src">&nbsp; List&lt;Dependency&gt; newDependencies = engine.getDependencies();</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;213</td> <td class="nbHitsUncovered"><a title="Line 213: Conditional coverage 50% (1/2).">&nbsp;2</a></td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp;<a title="Line 213: Conditional coverage 50% (1/2)."> <span class="keyword">if</span> (dependencies.size() != newDependencies.size()) {</a></span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;210</td> <td class="nbHitsCovered">&nbsp;4</td> <td class="src"><pre class="src">&nbsp; List&lt;Dependency&gt; dependencies = <span class="keyword">new</span> ArrayList&lt;Dependency&gt;(engine.getDependencies());</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;211</td> <td class="nbHitsCovered">&nbsp;4</td> <td class="src"><pre class="src">&nbsp; engine.scan(tmpDir);</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;212</td> <td class="nbHitsCovered">&nbsp;4</td> <td class="src"><pre class="src">&nbsp; List&lt;Dependency&gt; newDependencies = engine.getDependencies();</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;213</td> <td class="nbHitsUncovered"><a title="Line 213: Conditional coverage 50% (1/2).">&nbsp;4</a></td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp;<a title="Line 213: Conditional coverage 50% (1/2)."> <span class="keyword">if</span> (dependencies.size() != newDependencies.size()) {</a></span></pre></td></tr>
<tr> <td class="numLine">&nbsp;214</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; <span class="comment">//get the new dependencies</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;215</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; <span class="keyword">final</span> Set&lt;Dependency&gt; dependencySet = <span class="keyword">new</span> HashSet&lt;Dependency&gt;();</span></pre></td></tr>
@@ -443,7 +443,7 @@
<tr> <td class="numLineCover">&nbsp;238</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; }</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;239</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; }</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;240</td> <td class="nbHitsUncovered"><a title="Line 240: Conditional coverage 50% (1/2).">&nbsp;2</a></td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp;<a title="Line 240: Conditional coverage 50% (1/2)."> <span class="keyword">if</span> (<span class="keyword">this</span>.REMOVE_FROM_ANALYSIS.contains(dependency.getFileExtension())) {</a></span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;240</td> <td class="nbHitsUncovered"><a title="Line 240: Conditional coverage 50% (1/2).">&nbsp;4</a></td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp;<a title="Line 240: Conditional coverage 50% (1/2)."> <span class="keyword">if</span> (<span class="keyword">this</span>.REMOVE_FROM_ANALYSIS.contains(dependency.getFileExtension())) {</a></span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;241</td> <td class="nbHitsUncovered"><a title="Line 241: Conditional coverage 0% (0/4) [each condition: 0%, 0%].">&nbsp;0</a></td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp;<a title="Line 241: Conditional coverage 0% (0/4) [each condition: 0%, 0%]."> <span class="keyword">if</span> (<span class="string">"zip"</span>.equals(dependency.getFileExtension()) &amp;&amp; isZipFileActuallyJarFile(dependency)) {</a></span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;242</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; <span class="keyword">final</span> File tdir = getNextTempDirectory();</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;243</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; <span class="keyword">final</span> String fileName = dependency.getFileName();</span></pre></td></tr>
@@ -486,8 +486,8 @@
<tr> <td class="numLineCover">&nbsp;272</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; engine.getDependencies().remove(dependency);</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;273</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; }</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;274</td> <td class="nbHitsCovered">&nbsp;2</td> <td class="src"><pre class="src">&nbsp; Collections.sort(engine.getDependencies());</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;275</td> <td class="nbHitsCovered">&nbsp;2</td> <td class="src"><pre class="src">&nbsp; }</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;274</td> <td class="nbHitsCovered">&nbsp;4</td> <td class="src"><pre class="src">&nbsp; Collections.sort(engine.getDependencies());</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;275</td> <td class="nbHitsCovered">&nbsp;4</td> <td class="src"><pre class="src">&nbsp; }</pre></td></tr>
<tr> <td class="numLine">&nbsp;276</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;</pre></td></tr>
<tr> <td class="numLine">&nbsp;277</td> <td class="nbHits">&nbsp;</td>
@@ -504,20 +504,20 @@
<td class="src"><pre class="src">&nbsp;<span class="comment"> */</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;283</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; <span class="keyword">private</span> File getNextTempDirectory() <span class="keyword">throws</span> AnalysisException {</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;284</td> <td class="nbHitsCovered">&nbsp;2</td> <td class="src"><pre class="src">&nbsp; dirCount += 1;</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;285</td> <td class="nbHitsCovered">&nbsp;2</td> <td class="src"><pre class="src">&nbsp; <span class="keyword">final</span> File directory = <span class="keyword">new</span> File(tempFileLocation, String.valueOf(dirCount));</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;284</td> <td class="nbHitsCovered">&nbsp;4</td> <td class="src"><pre class="src">&nbsp; dirCount += 1;</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;285</td> <td class="nbHitsCovered">&nbsp;4</td> <td class="src"><pre class="src">&nbsp; <span class="keyword">final</span> File directory = <span class="keyword">new</span> File(tempFileLocation, String.valueOf(dirCount));</pre></td></tr>
<tr> <td class="numLine">&nbsp;286</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; <span class="comment">//getting an exception for some directories not being able to be created; might be because the directory already exists?</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;287</td> <td class="nbHitsUncovered"><a title="Line 287: Conditional coverage 50% (1/2).">&nbsp;2</a></td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp;<a title="Line 287: Conditional coverage 50% (1/2)."> <span class="keyword">if</span> (directory.exists()) {</a></span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;287</td> <td class="nbHitsUncovered"><a title="Line 287: Conditional coverage 50% (1/2).">&nbsp;4</a></td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp;<a title="Line 287: Conditional coverage 50% (1/2)."> <span class="keyword">if</span> (directory.exists()) {</a></span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;288</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; <span class="keyword">return</span> getNextTempDirectory();</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;289</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; }</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;290</td> <td class="nbHitsUncovered"><a title="Line 290: Conditional coverage 50% (1/2).">&nbsp;2</a></td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp;<a title="Line 290: Conditional coverage 50% (1/2)."> <span class="keyword">if</span> (!directory.mkdirs()) {</a></span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;290</td> <td class="nbHitsUncovered"><a title="Line 290: Conditional coverage 50% (1/2).">&nbsp;4</a></td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp;<a title="Line 290: Conditional coverage 50% (1/2)."> <span class="keyword">if</span> (!directory.mkdirs()) {</a></span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;291</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; <span class="keyword">final</span> String msg = String.format(<span class="string">"Unable to create temp directory '%s'."</span>, directory.getAbsolutePath());</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;292</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; <span class="keyword">throw</span> <span class="keyword">new</span> AnalysisException(msg);</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;293</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; }</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;294</td> <td class="nbHitsCovered">&nbsp;2</td> <td class="src"><pre class="src">&nbsp; <span class="keyword">return</span> directory;</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;294</td> <td class="nbHitsCovered">&nbsp;4</td> <td class="src"><pre class="src">&nbsp; <span class="keyword">return</span> directory;</pre></td></tr>
<tr> <td class="numLine">&nbsp;295</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; }</pre></td></tr>
<tr> <td class="numLine">&nbsp;296</td> <td class="nbHits">&nbsp;</td>
@@ -540,25 +540,25 @@
<td class="src"><pre class="src">&nbsp;<span class="comment"> */</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;305</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; <span class="keyword">private</span> <span class="keyword">void</span> extractFiles(File archive, File destination, Engine engine) <span class="keyword">throws</span> AnalysisException {</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;306</td> <td class="nbHitsUncovered"><a title="Line 306: Conditional coverage 50% (2/4) [each condition: 50%, 50%].">&nbsp;2</a></td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp;<a title="Line 306: Conditional coverage 50% (2/4) [each condition: 50%, 50%]."> <span class="keyword">if</span> (archive == <span class="keyword">null</span> || destination == <span class="keyword">null</span>) {</a></span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;306</td> <td class="nbHitsUncovered"><a title="Line 306: Conditional coverage 50% (2/4) [each condition: 50%, 50%].">&nbsp;4</a></td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp;<a title="Line 306: Conditional coverage 50% (2/4) [each condition: 50%, 50%]."> <span class="keyword">if</span> (archive == <span class="keyword">null</span> || destination == <span class="keyword">null</span>) {</a></span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;307</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; <span class="keyword">return</span>;</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;308</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; }</pre></td></tr>
<tr> <td class="numLine">&nbsp;309</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;310</td> <td class="nbHitsCovered">&nbsp;2</td> <td class="src"><pre class="src">&nbsp; FileInputStream fis = <span class="keyword">null</span>;</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;310</td> <td class="nbHitsCovered">&nbsp;4</td> <td class="src"><pre class="src">&nbsp; FileInputStream fis = <span class="keyword">null</span>;</pre></td></tr>
<tr> <td class="numLine">&nbsp;311</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; <span class="keyword">try</span> {</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;312</td> <td class="nbHitsCovered">&nbsp;2</td> <td class="src"><pre class="src">&nbsp; fis = <span class="keyword">new</span> FileInputStream(archive);</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;312</td> <td class="nbHitsCovered">&nbsp;4</td> <td class="src"><pre class="src">&nbsp; fis = <span class="keyword">new</span> FileInputStream(archive);</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;313</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; } <span class="keyword">catch</span> (FileNotFoundException ex) {</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;314</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; LOGGER.log(Level.FINE, <span class="keyword">null</span>, ex);</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;315</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; <span class="keyword">throw</span> <span class="keyword">new</span> AnalysisException(<span class="string">"Archive file was not found."</span>, ex);</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;316</td> <td class="nbHitsCovered">&nbsp;2</td> <td class="src"><pre class="src">&nbsp; }</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;317</td> <td class="nbHitsCovered">&nbsp;2</td> <td class="src"><pre class="src">&nbsp; <span class="keyword">final</span> String archiveExt = FileUtils.getFileExtension(archive.getName()).toLowerCase();</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;316</td> <td class="nbHitsCovered">&nbsp;4</td> <td class="src"><pre class="src">&nbsp; }</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;317</td> <td class="nbHitsCovered">&nbsp;4</td> <td class="src"><pre class="src">&nbsp; <span class="keyword">final</span> String archiveExt = FileUtils.getFileExtension(archive.getName()).toLowerCase();</pre></td></tr>
<tr> <td class="numLine">&nbsp;318</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; <span class="keyword">try</span> {</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;319</td> <td class="nbHitsUncovered"><a title="Line 319: Conditional coverage 50% (1/2).">&nbsp;2</a></td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp;<a title="Line 319: Conditional coverage 50% (1/2)."> <span class="keyword">if</span> (ZIPPABLES.contains(archiveExt)) {</a></span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;320</td> <td class="nbHitsCovered">&nbsp;2</td> <td class="src"><pre class="src">&nbsp; extractArchive(<span class="keyword">new</span> ZipArchiveInputStream(<span class="keyword">new</span> BufferedInputStream(fis)), destination, engine);</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;319</td> <td class="nbHitsUncovered"><a title="Line 319: Conditional coverage 50% (1/2).">&nbsp;4</a></td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp;<a title="Line 319: Conditional coverage 50% (1/2)."> <span class="keyword">if</span> (ZIPPABLES.contains(archiveExt)) {</a></span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;320</td> <td class="nbHitsCovered">&nbsp;4</td> <td class="src"><pre class="src">&nbsp; extractArchive(<span class="keyword">new</span> ZipArchiveInputStream(<span class="keyword">new</span> BufferedInputStream(fis)), destination, engine);</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;321</td> <td class="nbHitsUncovered"><a title="Line 321: Conditional coverage 0% (0/2).">&nbsp;0</a></td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp;<a title="Line 321: Conditional coverage 0% (0/2)."> } <span class="keyword">else</span> <span class="keyword">if</span> (<span class="string">"tar"</span>.equals(archiveExt)) {</a></span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;322</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; extractArchive(<span class="keyword">new</span> TarArchiveInputStream(<span class="keyword">new</span> BufferedInputStream(fis)), destination, engine);</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;323</td> <td class="nbHitsUncovered"><a title="Line 323: Conditional coverage 0% (0/4) [each condition: 0%, 0%].">&nbsp;0</a></td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp;<a title="Line 323: Conditional coverage 0% (0/4) [each condition: 0%, 0%]."> } <span class="keyword">else</span> <span class="keyword">if</span> (<span class="string">"gz"</span>.equals(archiveExt) || <span class="string">"tgz"</span>.equals(archiveExt)) {</a></span></pre></td></tr>
@@ -581,12 +581,12 @@
<tr> <td class="numLine">&nbsp;338</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; } <span class="keyword">finally</span> {</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;339</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; <span class="keyword">try</span> {</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;340</td> <td class="nbHitsCovered">&nbsp;2</td> <td class="src"><pre class="src">&nbsp; fis.close();</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;340</td> <td class="nbHitsCovered">&nbsp;4</td> <td class="src"><pre class="src">&nbsp; fis.close();</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;341</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; } <span class="keyword">catch</span> (IOException ex) {</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;342</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; LOGGER.log(Level.FINEST, <span class="keyword">null</span>, ex);</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;343</td> <td class="nbHitsCovered">&nbsp;2</td> <td class="src"><pre class="src">&nbsp; }</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;343</td> <td class="nbHitsCovered">&nbsp;4</td> <td class="src"><pre class="src">&nbsp; }</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;344</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; }</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;345</td> <td class="nbHitsCovered">&nbsp;2</td> <td class="src"><pre class="src">&nbsp; }</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;345</td> <td class="nbHitsCovered">&nbsp;4</td> <td class="src"><pre class="src">&nbsp; }</pre></td></tr>
<tr> <td class="numLine">&nbsp;346</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;</pre></td></tr>
<tr> <td class="numLine">&nbsp;347</td> <td class="nbHits">&nbsp;</td>
@@ -611,21 +611,21 @@
<td class="src"><pre class="src">&nbsp; ArchiveEntry entry;</pre></td></tr>
<tr> <td class="numLine">&nbsp;357</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; <span class="keyword">try</span> {</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;358</td> <td class="nbHitsCovered"><a title="Line 358: Conditional coverage 100% (2/2).">&nbsp;887</a></td> <td class="src"><pre class="src">&nbsp;<a title="Line 358: Conditional coverage 100% (2/2)."> <span class="keyword">while</span> ((entry = input.getNextEntry()) != <span class="keyword">null</span>) {</a></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;359</td> <td class="nbHitsCovered"><a title="Line 359: Conditional coverage 100% (2/2).">&nbsp;885</a></td> <td class="src"><pre class="src">&nbsp;<a title="Line 359: Conditional coverage 100% (2/2)."> <span class="keyword">if</span> (entry.isDirectory()) {</a></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;360</td> <td class="nbHitsCovered">&nbsp;36</td> <td class="src"><pre class="src">&nbsp; <span class="keyword">final</span> File d = <span class="keyword">new</span> File(destination, entry.getName());</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;361</td> <td class="nbHitsUncovered"><a title="Line 361: Conditional coverage 50% (1/2).">&nbsp;36</a></td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp;<a title="Line 361: Conditional coverage 50% (1/2)."> <span class="keyword">if</span> (!d.exists()) {</a></span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;362</td> <td class="nbHitsUncovered"><a title="Line 362: Conditional coverage 50% (1/2).">&nbsp;36</a></td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp;<a title="Line 362: Conditional coverage 50% (1/2)."> <span class="keyword">if</span> (!d.mkdirs()) {</a></span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;358</td> <td class="nbHitsCovered"><a title="Line 358: Conditional coverage 100% (2/2).">&nbsp;1774</a></td> <td class="src"><pre class="src">&nbsp;<a title="Line 358: Conditional coverage 100% (2/2)."> <span class="keyword">while</span> ((entry = input.getNextEntry()) != <span class="keyword">null</span>) {</a></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;359</td> <td class="nbHitsCovered"><a title="Line 359: Conditional coverage 100% (2/2).">&nbsp;1770</a></td> <td class="src"><pre class="src">&nbsp;<a title="Line 359: Conditional coverage 100% (2/2)."> <span class="keyword">if</span> (entry.isDirectory()) {</a></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;360</td> <td class="nbHitsCovered">&nbsp;72</td> <td class="src"><pre class="src">&nbsp; <span class="keyword">final</span> File d = <span class="keyword">new</span> File(destination, entry.getName());</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;361</td> <td class="nbHitsUncovered"><a title="Line 361: Conditional coverage 50% (1/2).">&nbsp;72</a></td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp;<a title="Line 361: Conditional coverage 50% (1/2)."> <span class="keyword">if</span> (!d.exists()) {</a></span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;362</td> <td class="nbHitsUncovered"><a title="Line 362: Conditional coverage 50% (1/2).">&nbsp;72</a></td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp;<a title="Line 362: Conditional coverage 50% (1/2)."> <span class="keyword">if</span> (!d.mkdirs()) {</a></span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;363</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; <span class="keyword">final</span> String msg = String.format(<span class="string">"Unable to create directory '%s'."</span>, d.getAbsolutePath());</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;364</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; <span class="keyword">throw</span> <span class="keyword">new</span> AnalysisException(msg);</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;365</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; }</pre></td></tr>
<tr> <td class="numLine">&nbsp;366</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; }</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;367</td> <td class="nbHitsCovered">&nbsp;36</td> <td class="src"><pre class="src">&nbsp; } <span class="keyword">else</span> {</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;368</td> <td class="nbHitsCovered">&nbsp;849</td> <td class="src"><pre class="src">&nbsp; <span class="keyword">final</span> File file = <span class="keyword">new</span> File(destination, entry.getName());</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;369</td> <td class="nbHitsCovered">&nbsp;849</td> <td class="src"><pre class="src">&nbsp; <span class="keyword">final</span> String ext = FileUtils.getFileExtension(file.getName());</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;370</td> <td class="nbHitsUncovered"><a title="Line 370: Conditional coverage 50% (1/2).">&nbsp;849</a></td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp;<a title="Line 370: Conditional coverage 50% (1/2)."> <span class="keyword">if</span> (engine.supportsExtension(ext)) {</a></span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;367</td> <td class="nbHitsCovered">&nbsp;72</td> <td class="src"><pre class="src">&nbsp; } <span class="keyword">else</span> {</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;368</td> <td class="nbHitsCovered">&nbsp;1698</td> <td class="src"><pre class="src">&nbsp; <span class="keyword">final</span> File file = <span class="keyword">new</span> File(destination, entry.getName());</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;369</td> <td class="nbHitsCovered">&nbsp;1698</td> <td class="src"><pre class="src">&nbsp; <span class="keyword">final</span> String ext = FileUtils.getFileExtension(file.getName());</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;370</td> <td class="nbHitsUncovered"><a title="Line 370: Conditional coverage 50% (1/2).">&nbsp;1698</a></td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp;<a title="Line 370: Conditional coverage 50% (1/2)."> <span class="keyword">if</span> (engine.supportsExtension(ext)) {</a></span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;371</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; BufferedOutputStream bos = <span class="keyword">null</span>;</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;372</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; FileOutputStream fos;</pre></td></tr>
@@ -673,7 +673,7 @@
<td class="src"><pre class="src">&nbsp; }</pre></td></tr>
<tr> <td class="numLine">&nbsp;406</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; }</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;407</td> <td class="nbHitsCovered">&nbsp;849</td> <td class="src"><pre class="src">&nbsp; }</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;407</td> <td class="nbHitsCovered">&nbsp;1698</td> <td class="src"><pre class="src">&nbsp; }</pre></td></tr>
<tr> <td class="numLine">&nbsp;408</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; }</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;409</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; } <span class="keyword">catch</span> (IOException ex) {</span></pre></td></tr>
@@ -682,18 +682,18 @@
<tr> <td class="numLineCover">&nbsp;412</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; <span class="keyword">throw</span> <span class="keyword">new</span> ArchiveExtractionException(ex);</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;413</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; } <span class="keyword">finally</span> {</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;414</td> <td class="nbHitsUncovered"><a title="Line 414: Conditional coverage 25% (1/4) [each condition: 50%, 0%].">&nbsp;2</a></td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp;<a title="Line 414: Conditional coverage 25% (1/4) [each condition: 50%, 0%]."> <span class="keyword">if</span> (input != <span class="keyword">null</span>) {</a></span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;414</td> <td class="nbHitsUncovered"><a title="Line 414: Conditional coverage 25% (1/4) [each condition: 50%, 0%].">&nbsp;4</a></td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp;<a title="Line 414: Conditional coverage 25% (1/4) [each condition: 50%, 0%]."> <span class="keyword">if</span> (input != <span class="keyword">null</span>) {</a></span></pre></td></tr>
<tr> <td class="numLine">&nbsp;415</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; <span class="keyword">try</span> {</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;416</td> <td class="nbHitsCovered">&nbsp;2</td> <td class="src"><pre class="src">&nbsp; input.close();</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;416</td> <td class="nbHitsCovered">&nbsp;4</td> <td class="src"><pre class="src">&nbsp; input.close();</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;417</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; } <span class="keyword">catch</span> (IOException ex) {</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;418</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; LOGGER.log(Level.FINEST, <span class="keyword">null</span>, ex);</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;419</td> <td class="nbHitsCovered">&nbsp;2</td> <td class="src"><pre class="src">&nbsp; }</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;419</td> <td class="nbHitsCovered">&nbsp;4</td> <td class="src"><pre class="src">&nbsp; }</pre></td></tr>
<tr> <td class="numLine">&nbsp;420</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; }</pre></td></tr>
<tr> <td class="numLine">&nbsp;421</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; }</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;422</td> <td class="nbHitsCovered">&nbsp;2</td> <td class="src"><pre class="src">&nbsp; }</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;422</td> <td class="nbHitsCovered">&nbsp;4</td> <td class="src"><pre class="src">&nbsp; }</pre></td></tr>
<tr> <td class="numLine">&nbsp;423</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;</pre></td></tr>
<tr> <td class="numLine">&nbsp;424</td> <td class="nbHits">&nbsp;</td>
@@ -796,6 +796,6 @@
<td class="src"><pre class="src">&nbsp;}</pre></td></tr>
</table>
<div class="footer">Report generated by <a href="http://cobertura.sourceforge.net/" target="_top">Cobertura</a> 2.0.3 on 5/10/14 8:03 AM.</div>
<div class="footer">Report generated by <a href="http://cobertura.sourceforge.net/" target="_top">Cobertura</a> 2.0.3 on 6/22/14 8:56 PM.</div>
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