version 1.2.0 of the documentation

This commit is contained in:
Jeremy Long
2014-04-28 09:08:21 -04:00
parent 99d2502581
commit f601cfb362
1005 changed files with 35868 additions and 33723 deletions

View File

@@ -12,7 +12,7 @@
<div class="separator">&nbsp;</div>
<table class="report">
<thead><tr> <td class="heading">Classes in this File</td> <td class="heading"><a class="dfn" href="help.html" onclick="popupwindow('help.html'); return false;">Line Coverage</a></td> <td class="heading"><a class="dfn" href="help.html" onclick="popupwindow('help.html'); return false;">Branch Coverage</a></td> <td class="heading"><a class="dfn" href="help.html" onclick="popupwindow('help.html'); return false;">Complexity</a></td></tr></thead>
<tr><td><a href="org.owasp.dependencycheck.analyzer.ArchiveAnalyzer.html">ArchiveAnalyzer</a></td><td><table cellpadding="0px" cellspacing="0px" class="percentgraph"><tr class="percentgraph"><td align="right" class="percentgraph" width="40">0%</td><td class="percentgraph"><div class="percentgraph"><div class="greenbar" style="width:0px"><span class="text">0/163</span></div></div></td></tr></table></td><td><table cellpadding="0px" cellspacing="0px" class="percentgraph"><tr class="percentgraph"><td align="right" class="percentgraph" width="40">0%</td><td class="percentgraph"><div class="percentgraph"><div class="greenbar" style="width:0px"><span class="text">0/70</span></div></div></td></tr></table></td><td class="value"><span class="hidden">6.454545454545454;</span>6.455</td></tr>
<tr><td><a href="org.owasp.dependencycheck.analyzer.ArchiveAnalyzer.html">ArchiveAnalyzer</a></td><td><table cellpadding="0px" cellspacing="0px" class="percentgraph"><tr class="percentgraph"><td align="right" class="percentgraph" width="40">38%</td><td class="percentgraph"><div class="percentgraph"><div class="greenbar" style="width:38px"><span class="text">62/159</span></div></div></td></tr></table></td><td><table cellpadding="0px" cellspacing="0px" class="percentgraph"><tr class="percentgraph"><td align="right" class="percentgraph" width="40">28%</td><td class="percentgraph"><div class="percentgraph"><div class="greenbar" style="width:28px"><span class="text">19/66</span></div></div></td></tr></table></td><td class="value"><span class="hidden">6.181818181818182;</span>6.182</td></tr>
</table>
<div class="separator">&nbsp;</div>
@@ -137,7 +137,7 @@
<td class="src"><pre class="src">&nbsp;<span class="comment"> * The logger.</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;60</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> */</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;61</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; <span class="keyword">private</span> <span class="keyword">static</span> <span class="keyword">final</span> Logger LOGGER = Logger.getLogger(ArchiveAnalyzer.<span class="keyword">class</span>.getName());</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;61</td> <td class="nbHitsCovered">&nbsp;1</td> <td class="src"><pre class="src">&nbsp; <span class="keyword">private</span> <span class="keyword">static</span> <span class="keyword">final</span> Logger LOGGER = Logger.getLogger(ArchiveAnalyzer.<span class="keyword">class</span>.getName());</pre></td></tr>
<tr> <td class="numLine">&nbsp;62</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; <span class="comment">/**</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;63</td> <td class="nbHits">&nbsp;</td>
@@ -152,7 +152,7 @@
<td class="src"><pre class="src">&nbsp;<span class="comment"> * The count of directories created during analysis. This is used for creating temporary directories.</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;68</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> */</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;69</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; <span class="keyword">private</span> <span class="keyword">static</span> <span class="keyword">int</span> dirCount = 0;</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;69</td> <td class="nbHitsCovered">&nbsp;1</td> <td class="src"><pre class="src">&nbsp; <span class="keyword">private</span> <span class="keyword">static</span> <span class="keyword">int</span> dirCount = 0;</pre></td></tr>
<tr> <td class="numLine">&nbsp;70</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; <span class="comment">/**</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;71</td> <td class="nbHits">&nbsp;</td>
@@ -167,7 +167,7 @@
<td class="src"><pre class="src">&nbsp;<span class="comment"> * The max scan depth that the analyzer will recursively extract nested archives.</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;76</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> */</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;77</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; <span class="keyword">private</span> <span class="keyword">static</span> <span class="keyword">final</span> <span class="keyword">int</span> MAX_SCAN_DEPTH = Settings.getInt(<span class="string">"archive.scan.depth"</span>, 3);</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;77</td> <td class="nbHitsCovered">&nbsp;1</td> <td class="src"><pre class="src">&nbsp; <span class="keyword">private</span> <span class="keyword">static</span> <span class="keyword">final</span> <span class="keyword">int</span> MAX_SCAN_DEPTH = Settings.getInt(<span class="string">"archive.scan.depth"</span>, 3);</pre></td></tr>
<tr> <td class="numLine">&nbsp;78</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; <span class="comment">/**</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;79</td> <td class="nbHits">&nbsp;</td>
@@ -194,14 +194,14 @@
<td class="src"><pre class="src">&nbsp;<span class="comment"> * The phase that this analyzer is intended to run in.</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;90</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> */</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;91</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; <span class="keyword">private</span> <span class="keyword">static</span> <span class="keyword">final</span> AnalysisPhase ANALYSIS_PHASE = AnalysisPhase.INITIAL;</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;91</td> <td class="nbHitsCovered">&nbsp;1</td> <td class="src"><pre class="src">&nbsp; <span class="keyword">private</span> <span class="keyword">static</span> <span class="keyword">final</span> AnalysisPhase ANALYSIS_PHASE = AnalysisPhase.INITIAL;</pre></td></tr>
<tr> <td class="numLine">&nbsp;92</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; <span class="comment">/**</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;93</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> * The set of things we can handle with Zip methods</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;94</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> */</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;95</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; <span class="keyword">private</span> <span class="keyword">static</span> <span class="keyword">final</span> Set&lt;String&gt; ZIPPABLES = newHashSet(<span class="string">"zip"</span>, <span class="string">"ear"</span>, <span class="string">"war"</span>, <span class="string">"nupkg"</span>);</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;95</td> <td class="nbHitsCovered">&nbsp;1</td> <td class="src"><pre class="src">&nbsp; <span class="keyword">private</span> <span class="keyword">static</span> <span class="keyword">final</span> Set&lt;String&gt; ZIPPABLES = newHashSet(<span class="string">"zip"</span>, <span class="string">"ear"</span>, <span class="string">"war"</span>, <span class="string">"jar"</span>, <span class="string">"sar"</span>, <span class="string">"apk"</span>, <span class="string">"nupkg"</span>);</pre></td></tr>
<tr> <td class="numLine">&nbsp;96</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; <span class="comment">/**</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;97</td> <td class="nbHits">&nbsp;</td>
@@ -210,19 +210,19 @@
<td class="src"><pre class="src">&nbsp;<span class="comment"> * to be explicitly handled in extractFiles().</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;99</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> */</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;100</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; <span class="keyword">private</span> <span class="keyword">static</span> <span class="keyword">final</span> Set&lt;String&gt; EXTENSIONS = newHashSet(<span class="string">"tar"</span>, <span class="string">"gz"</span>, <span class="string">"tgz"</span>);</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;100</td> <td class="nbHitsCovered">&nbsp;1</td> <td class="src"><pre class="src">&nbsp; <span class="keyword">private</span> <span class="keyword">static</span> <span class="keyword">final</span> Set&lt;String&gt; EXTENSIONS = newHashSet(<span class="string">"tar"</span>, <span class="string">"gz"</span>, <span class="string">"tgz"</span>);</pre></td></tr>
<tr> <td class="numLine">&nbsp;101</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;</pre></td></tr>
<tr> <td class="numLine">&nbsp;102</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; <span class="keyword">static</span> {</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;103</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; <span class="keyword">final</span> String additionalZipExt = Settings.getString(Settings.KEYS.ADDITIONAL_ZIP_EXTENSIONS);</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;104</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; <span class="keyword">if</span> (additionalZipExt != <span class="keyword">null</span>) {</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;103</td> <td class="nbHitsCovered">&nbsp;1</td> <td class="src"><pre class="src">&nbsp; <span class="keyword">final</span> String additionalZipExt = Settings.getString(Settings.KEYS.ADDITIONAL_ZIP_EXTENSIONS);</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;104</td> <td class="nbHitsCovered">&nbsp;1</td> <td class="src"><pre class="src">&nbsp; <span class="keyword">if</span> (additionalZipExt != <span class="keyword">null</span>) {</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;105</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; <span class="keyword">final</span> HashSet ext = <span class="keyword">new</span> HashSet&lt;String&gt;(Arrays.asList(additionalZipExt));</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;106</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; ZIPPABLES.addAll(ext);</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;107</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; }</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;108</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; EXTENSIONS.addAll(ZIPPABLES);</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;109</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; }</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;108</td> <td class="nbHitsCovered">&nbsp;1</td> <td class="src"><pre class="src">&nbsp; EXTENSIONS.addAll(ZIPPABLES);</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;109</td> <td class="nbHitsCovered">&nbsp;1</td> <td class="src"><pre class="src">&nbsp; }</pre></td></tr>
<tr> <td class="numLine">&nbsp;110</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;</pre></td></tr>
<tr> <td class="numLine">&nbsp;111</td> <td class="nbHits">&nbsp;</td>
@@ -239,7 +239,7 @@
<td class="src"><pre class="src">&nbsp; @Override</pre></td></tr>
<tr> <td class="numLine">&nbsp;117</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; <span class="keyword">public</span> Set&lt;String&gt; getSupportedExtensions() {</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;118</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; <span class="keyword">return</span> EXTENSIONS;</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;118</td> <td class="nbHitsCovered">&nbsp;850</td> <td class="src"><pre class="src">&nbsp; <span class="keyword">return</span> EXTENSIONS;</pre></td></tr>
<tr> <td class="numLine">&nbsp;119</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; }</pre></td></tr>
<tr> <td class="numLine">&nbsp;120</td> <td class="nbHits">&nbsp;</td>
@@ -258,7 +258,7 @@
<td class="src"><pre class="src">&nbsp; @Override</pre></td></tr>
<tr> <td class="numLine">&nbsp;127</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; <span class="keyword">public</span> String getName() {</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;128</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; <span class="keyword">return</span> ANALYZER_NAME;</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;128</td> <td class="nbHitsCovered">&nbsp;4</td> <td class="src"><pre class="src">&nbsp; <span class="keyword">return</span> ANALYZER_NAME;</pre></td></tr>
<tr> <td class="numLine">&nbsp;129</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; }</pre></td></tr>
<tr> <td class="numLine">&nbsp;130</td> <td class="nbHits">&nbsp;</td>
@@ -277,7 +277,7 @@
<td class="src"><pre class="src">&nbsp; @Override</pre></td></tr>
<tr> <td class="numLine">&nbsp;137</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; <span class="keyword">public</span> AnalysisPhase getAnalysisPhase() {</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;138</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; <span class="keyword">return</span> ANALYSIS_PHASE;</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;138</td> <td class="nbHitsCovered">&nbsp;1</td> <td class="src"><pre class="src">&nbsp; <span class="keyword">return</span> ANALYSIS_PHASE;</pre></td></tr>
<tr> <td class="numLine">&nbsp;139</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; }</pre></td></tr>
<tr> <td class="numLine">&nbsp;140</td> <td class="nbHits">&nbsp;</td>
@@ -298,7 +298,7 @@
<td class="src"><pre class="src">&nbsp; @Override</pre></td></tr>
<tr> <td class="numLine">&nbsp;148</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; <span class="keyword">protected</span> String getAnalyzerEnabledSettingKey() {</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;149</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; <span class="keyword">return</span> Settings.KEYS.ANALYZER_ARCHIVE_ENABLED;</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;149</td> <td class="nbHitsCovered">&nbsp;2</td> <td class="src"><pre class="src">&nbsp; <span class="keyword">return</span> Settings.KEYS.ANALYZER_ARCHIVE_ENABLED;</pre></td></tr>
<tr> <td class="numLine">&nbsp;150</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; }</pre></td></tr>
<tr> <td class="numLine">&nbsp;151</td> <td class="nbHits">&nbsp;</td>
@@ -317,391 +317,377 @@
<td class="src"><pre class="src">&nbsp; @Override</pre></td></tr>
<tr> <td class="numLine">&nbsp;158</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; <span class="keyword">public</span> <span class="keyword">void</span> initializeFileTypeAnalyzer() <span class="keyword">throws</span> Exception {</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;159</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; <span class="keyword">final</span> File baseDir = Settings.getTempDirectory();</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;160</td> <td class="nbHitsUncovered"><a title="Line 160: Conditional coverage 0% (0/2).">&nbsp;0</a></td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp;<a title="Line 160: Conditional coverage 0% (0/2)."> <span class="keyword">if</span> (!baseDir.exists()) {</a></span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;161</td> <td class="nbHitsUncovered"><a title="Line 161: Conditional coverage 0% (0/2).">&nbsp;0</a></td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp;<a title="Line 161: Conditional coverage 0% (0/2)."> <span class="keyword">if</span> (!baseDir.mkdirs()) {</a></span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;162</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; <span class="keyword">final</span> String msg = String.format(<span class="string">"Unable to make a temporary folder '%s'"</span>, baseDir.getPath());</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;163</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; <span class="keyword">throw</span> <span class="keyword">new</span> AnalysisException(msg);</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;159</td> <td class="nbHitsCovered">&nbsp;1</td> <td class="src"><pre class="src">&nbsp; <span class="keyword">final</span> File baseDir = Settings.getTempDirectory();</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;160</td> <td class="nbHitsCovered">&nbsp;1</td> <td class="src"><pre class="src">&nbsp; tempFileLocation = File.createTempFile(<span class="string">"check"</span>, <span class="string">"tmp"</span>, baseDir);</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;161</td> <td class="nbHitsUncovered"><a title="Line 161: Conditional coverage 50% (1/2).">&nbsp;1</a></td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp;<a title="Line 161: Conditional coverage 50% (1/2)."> <span class="keyword">if</span> (!tempFileLocation.delete()) {</a></span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;162</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; <span class="keyword">final</span> String msg = String.format(<span class="string">"Unable to delete temporary file '%s'."</span>, tempFileLocation.getAbsolutePath());</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;163</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; <span class="keyword">throw</span> <span class="keyword">new</span> AnalysisException(msg);</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;164</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; }</pre></td></tr>
<tr> <td class="numLine">&nbsp;165</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; }</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;166</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; tempFileLocation = File.createTempFile(<span class="string">"check"</span>, <span class="string">"tmp"</span>, baseDir);</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;167</td> <td class="nbHitsUncovered"><a title="Line 167: Conditional coverage 0% (0/2).">&nbsp;0</a></td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp;<a title="Line 167: Conditional coverage 0% (0/2)."> <span class="keyword">if</span> (!tempFileLocation.delete()) {</a></span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;168</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; <span class="keyword">final</span> String msg = String.format(<span class="string">"Unable to delete temporary file '%s'."</span>, tempFileLocation.getAbsolutePath());</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;169</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; <span class="keyword">throw</span> <span class="keyword">new</span> AnalysisException(msg);</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;165</td> <td class="nbHitsUncovered"><a title="Line 165: Conditional coverage 50% (1/2).">&nbsp;1</a></td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp;<a title="Line 165: Conditional coverage 50% (1/2)."> <span class="keyword">if</span> (!tempFileLocation.mkdirs()) {</a></span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;166</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; <span class="keyword">final</span> String msg = String.format(<span class="string">"Unable to create directory '%s'."</span>, tempFileLocation.getAbsolutePath());</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;167</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; <span class="keyword">throw</span> <span class="keyword">new</span> AnalysisException(msg);</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;168</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; }</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;169</td> <td class="nbHitsCovered">&nbsp;1</td> <td class="src"><pre class="src">&nbsp; }</pre></td></tr>
<tr> <td class="numLine">&nbsp;170</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; }</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;171</td> <td class="nbHitsUncovered"><a title="Line 171: Conditional coverage 0% (0/2).">&nbsp;0</a></td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp;<a title="Line 171: Conditional coverage 0% (0/2)."> <span class="keyword">if</span> (!tempFileLocation.mkdirs()) {</a></span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;172</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; <span class="keyword">final</span> String msg = String.format(<span class="string">"Unable to create directory '%s'."</span>, tempFileLocation.getAbsolutePath());</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;173</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; <span class="keyword">throw</span> <span class="keyword">new</span> AnalysisException(msg);</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;174</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; }</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;175</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; }</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;176</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;</pre></td></tr>
<tr> <td class="numLine">&nbsp;177</td> <td class="nbHits">&nbsp;</td>
<tr> <td class="numLine">&nbsp;171</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; <span class="comment">/**</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;178</td> <td class="nbHits">&nbsp;</td>
<tr> <td class="numLine">&nbsp;172</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> * The close method deletes any temporary files and directories created during analysis.</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;179</td> <td class="nbHits">&nbsp;</td>
<tr> <td class="numLine">&nbsp;173</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> *</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;180</td> <td class="nbHits">&nbsp;</td>
<tr> <td class="numLine">&nbsp;174</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> * @throws Exception thrown if there is an exception deleting temporary files</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;181</td> <td class="nbHits">&nbsp;</td>
<tr> <td class="numLine">&nbsp;175</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> */</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;182</td> <td class="nbHits">&nbsp;</td>
<tr> <td class="numLine">&nbsp;176</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; @Override</pre></td></tr>
<tr> <td class="numLine">&nbsp;183</td> <td class="nbHits">&nbsp;</td>
<tr> <td class="numLine">&nbsp;177</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; <span class="keyword">public</span> <span class="keyword">void</span> close() <span class="keyword">throws</span> Exception {</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;184</td> <td class="nbHitsUncovered"><a title="Line 184: Conditional coverage 0% (0/4) [each condition: 0%, 0%].">&nbsp;0</a></td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp;<a title="Line 184: Conditional coverage 0% (0/4) [each condition: 0%, 0%]."> <span class="keyword">if</span> (tempFileLocation != <span class="keyword">null</span> &amp;&amp; tempFileLocation.exists()) {</a></span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;185</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; LOGGER.log(Level.FINE, <span class="string">"Attempting to delete temporary files"</span>);</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;186</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; <span class="keyword">final</span> <span class="keyword">boolean</span> success = FileUtils.delete(tempFileLocation);</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;187</td> <td class="nbHitsUncovered"><a title="Line 187: Conditional coverage 0% (0/2).">&nbsp;0</a></td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp;<a title="Line 187: Conditional coverage 0% (0/2)."> <span class="keyword">if</span> (!success) {</a></span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;188</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; LOGGER.log(Level.WARNING, <span class="string">"Failed to delete some temporary files, see the log for more details"</span>);</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;189</td> <td class="nbHits">&nbsp;</td>
<tr> <td class="numLineCover">&nbsp;178</td> <td class="nbHitsUncovered"><a title="Line 178: Conditional coverage 50% (2/4) [each condition: 50%, 50%].">&nbsp;1</a></td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp;<a title="Line 178: Conditional coverage 50% (2/4) [each condition: 50%, 50%]."> <span class="keyword">if</span> (tempFileLocation != <span class="keyword">null</span> &amp;&amp; tempFileLocation.exists()) {</a></span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;179</td> <td class="nbHitsCovered">&nbsp;1</td> <td class="src"><pre class="src">&nbsp; LOGGER.log(Level.FINE, <span class="string">"Attempting to delete temporary files"</span>);</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;180</td> <td class="nbHitsCovered">&nbsp;1</td> <td class="src"><pre class="src">&nbsp; <span class="keyword">final</span> <span class="keyword">boolean</span> success = FileUtils.delete(tempFileLocation);</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;181</td> <td class="nbHitsUncovered"><a title="Line 181: Conditional coverage 50% (1/2).">&nbsp;1</a></td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp;<a title="Line 181: Conditional coverage 50% (1/2)."> <span class="keyword">if</span> (!success) {</a></span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;182</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; LOGGER.log(Level.WARNING, <span class="string">"Failed to delete some temporary files, see the log for more details"</span>);</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;183</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; }</pre></td></tr>
<tr> <td class="numLine">&nbsp;190</td> <td class="nbHits">&nbsp;</td>
<tr> <td class="numLine">&nbsp;184</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; }</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;191</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; }</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;192</td> <td class="nbHits">&nbsp;</td>
<tr> <td class="numLineCover">&nbsp;185</td> <td class="nbHitsCovered">&nbsp;1</td> <td class="src"><pre class="src">&nbsp; }</pre></td></tr>
<tr> <td class="numLine">&nbsp;186</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;</pre></td></tr>
<tr> <td class="numLine">&nbsp;193</td> <td class="nbHits">&nbsp;</td>
<tr> <td class="numLine">&nbsp;187</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; <span class="comment">/**</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;194</td> <td class="nbHits">&nbsp;</td>
<tr> <td class="numLine">&nbsp;188</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> * Analyzes a given dependency. If the dependency is an archive, such as a WAR or EAR, the contents are extracted,</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;195</td> <td class="nbHits">&nbsp;</td>
<tr> <td class="numLine">&nbsp;189</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> * scanned, and added to the list of dependencies within the engine.</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;196</td> <td class="nbHits">&nbsp;</td>
<tr> <td class="numLine">&nbsp;190</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> *</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;197</td> <td class="nbHits">&nbsp;</td>
<tr> <td class="numLine">&nbsp;191</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> * @param dependency the dependency to analyze</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;198</td> <td class="nbHits">&nbsp;</td>
<tr> <td class="numLine">&nbsp;192</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> * @param engine the engine scanning</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;199</td> <td class="nbHits">&nbsp;</td>
<tr> <td class="numLine">&nbsp;193</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> * @throws AnalysisException thrown if there is an analysis exception</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;200</td> <td class="nbHits">&nbsp;</td>
<tr> <td class="numLine">&nbsp;194</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> */</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;201</td> <td class="nbHits">&nbsp;</td>
<tr> <td class="numLine">&nbsp;195</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; @Override</pre></td></tr>
<tr> <td class="numLine">&nbsp;202</td> <td class="nbHits">&nbsp;</td>
<tr> <td class="numLine">&nbsp;196</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; <span class="keyword">public</span> <span class="keyword">void</span> analyzeFileType(Dependency dependency, Engine engine) <span class="keyword">throws</span> AnalysisException {</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;203</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; <span class="keyword">final</span> File f = <span class="keyword">new</span> File(dependency.getActualFilePath());</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;204</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; <span class="keyword">final</span> File tmpDir = getNextTempDirectory();</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;205</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; extractFiles(f, tmpDir, engine);</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;206</td> <td class="nbHits">&nbsp;</td>
<tr> <td class="numLineCover">&nbsp;197</td> <td class="nbHitsCovered">&nbsp;2</td> <td class="src"><pre class="src">&nbsp; <span class="keyword">final</span> File f = <span class="keyword">new</span> File(dependency.getActualFilePath());</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;198</td> <td class="nbHitsCovered">&nbsp;2</td> <td class="src"><pre class="src">&nbsp; <span class="keyword">final</span> File tmpDir = getNextTempDirectory();</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;199</td> <td class="nbHitsCovered">&nbsp;2</td> <td class="src"><pre class="src">&nbsp; extractFiles(f, tmpDir, engine);</pre></td></tr>
<tr> <td class="numLine">&nbsp;200</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;</pre></td></tr>
<tr> <td class="numLine">&nbsp;207</td> <td class="nbHits">&nbsp;</td>
<tr> <td class="numLine">&nbsp;201</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; <span class="comment">//make a copy</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;208</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; <span class="keyword">final</span> List&lt;Dependency&gt; dependencies = <span class="keyword">new</span> ArrayList&lt;Dependency&gt;(engine.getDependencies());</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;209</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; engine.scan(tmpDir);</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;210</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; <span class="keyword">final</span> List&lt;Dependency&gt; newDependencies = engine.getDependencies();</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;211</td> <td class="nbHitsUncovered"><a title="Line 211: Conditional coverage 0% (0/2).">&nbsp;0</a></td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp;<a title="Line 211: Conditional coverage 0% (0/2)."> <span class="keyword">if</span> (dependencies.size() != newDependencies.size()) {</a></span></pre></td></tr>
<tr> <td class="numLine">&nbsp;212</td> <td class="nbHits">&nbsp;</td>
<tr> <td class="numLineCover">&nbsp;202</td> <td class="nbHitsCovered">&nbsp;2</td> <td class="src"><pre class="src">&nbsp; <span class="keyword">final</span> List&lt;Dependency&gt; dependencies = <span class="keyword">new</span> ArrayList&lt;Dependency&gt;(engine.getDependencies());</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;203</td> <td class="nbHitsCovered">&nbsp;2</td> <td class="src"><pre class="src">&nbsp; engine.scan(tmpDir);</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;204</td> <td class="nbHitsCovered">&nbsp;2</td> <td class="src"><pre class="src">&nbsp; <span class="keyword">final</span> List&lt;Dependency&gt; newDependencies = engine.getDependencies();</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;205</td> <td class="nbHitsUncovered"><a title="Line 205: Conditional coverage 50% (1/2).">&nbsp;2</a></td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp;<a title="Line 205: Conditional coverage 50% (1/2)."> <span class="keyword">if</span> (dependencies.size() != newDependencies.size()) {</a></span></pre></td></tr>
<tr> <td class="numLine">&nbsp;206</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; <span class="comment">//get the new dependencies</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;213</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; <span class="keyword">final</span> Set&lt;Dependency&gt; dependencySet = <span class="keyword">new</span> HashSet&lt;Dependency&gt;();</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;214</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; dependencySet.addAll(newDependencies);</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;215</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; dependencySet.removeAll(dependencies);</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;216</td> <td class="nbHits">&nbsp;</td>
<tr> <td class="numLineCover">&nbsp;207</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; <span class="keyword">final</span> Set&lt;Dependency&gt; dependencySet = <span class="keyword">new</span> HashSet&lt;Dependency&gt;();</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;208</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; dependencySet.addAll(newDependencies);</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;209</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; dependencySet.removeAll(dependencies);</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;210</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;217</td> <td class="nbHitsUncovered"><a title="Line 217: Conditional coverage 0% (0/2).">&nbsp;0</a></td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp;<a title="Line 217: Conditional coverage 0% (0/2)."> <span class="keyword">for</span> (Dependency d : dependencySet) {</a></span></pre></td></tr>
<tr> <td class="numLine">&nbsp;218</td> <td class="nbHits">&nbsp;</td>
<tr> <td class="numLineCover">&nbsp;211</td> <td class="nbHitsUncovered"><a title="Line 211: Conditional coverage 0% (0/2).">&nbsp;0</a></td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp;<a title="Line 211: Conditional coverage 0% (0/2)."> <span class="keyword">for</span> (Dependency d : dependencySet) {</a></span></pre></td></tr>
<tr> <td class="numLine">&nbsp;212</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; <span class="comment">//fix the dependency's display name and path</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;219</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; <span class="keyword">final</span> String displayPath = String.format(<span class="string">"%s%s"</span>,</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;220</td> <td class="nbHits">&nbsp;</td>
<tr> <td class="numLineCover">&nbsp;213</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; <span class="keyword">final</span> String displayPath = String.format(<span class="string">"%s%s"</span>,</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;214</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; dependency.getFilePath(),</pre></td></tr>
<tr> <td class="numLine">&nbsp;221</td> <td class="nbHits">&nbsp;</td>
<tr> <td class="numLine">&nbsp;215</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; d.getActualFilePath().substring(tmpDir.getAbsolutePath().length()));</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;222</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; <span class="keyword">final</span> String displayName = String.format(<span class="string">"%s%s%s"</span>,</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;223</td> <td class="nbHits">&nbsp;</td>
<tr> <td class="numLineCover">&nbsp;216</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; <span class="keyword">final</span> String displayName = String.format(<span class="string">"%s%s%s"</span>,</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;217</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; dependency.getFileName(),</pre></td></tr>
<tr> <td class="numLine">&nbsp;224</td> <td class="nbHits">&nbsp;</td>
<tr> <td class="numLine">&nbsp;218</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; File.separator,</pre></td></tr>
<tr> <td class="numLine">&nbsp;225</td> <td class="nbHits">&nbsp;</td>
<tr> <td class="numLine">&nbsp;219</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; d.getFileName());</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;226</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; d.setFilePath(displayPath);</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;227</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; d.setFileName(displayName);</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;228</td> <td class="nbHits">&nbsp;</td>
<tr> <td class="numLineCover">&nbsp;220</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; d.setFilePath(displayPath);</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;221</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; d.setFileName(displayName);</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;222</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;</pre></td></tr>
<tr> <td class="numLine">&nbsp;229</td> <td class="nbHits">&nbsp;</td>
<tr> <td class="numLine">&nbsp;223</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; <span class="comment">//TODO - can we get more evidence from the parent? EAR contains module name, etc.</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;230</td> <td class="nbHits">&nbsp;</td>
<tr> <td class="numLine">&nbsp;224</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; <span class="comment">//analyze the dependency (i.e. extract files) if it is a supported type.</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;231</td> <td class="nbHitsUncovered"><a title="Line 231: Conditional coverage 0% (0/4) [each condition: 0%, 0%].">&nbsp;0</a></td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp;<a title="Line 231: Conditional coverage 0% (0/4) [each condition: 0%, 0%]."> <span class="keyword">if</span> (<span class="keyword">this</span>.supportsExtension(d.getFileExtension()) &amp;&amp; scanDepth &lt; MAX_SCAN_DEPTH) {</a></span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;232</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; scanDepth += 1;</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;233</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; analyze(d, engine);</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;234</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; scanDepth -= 1;</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;225</td> <td class="nbHitsUncovered"><a title="Line 225: Conditional coverage 0% (0/4) [each condition: 0%, 0%].">&nbsp;0</a></td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp;<a title="Line 225: Conditional coverage 0% (0/4) [each condition: 0%, 0%]."> <span class="keyword">if</span> (<span class="keyword">this</span>.supportsExtension(d.getFileExtension()) &amp;&amp; scanDepth &lt; MAX_SCAN_DEPTH) {</a></span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;226</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; scanDepth += 1;</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;227</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; analyze(d, engine);</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;228</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; scanDepth -= 1;</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;229</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; }</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;230</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; }</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;231</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; }</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;232</td> <td class="nbHitsCovered">&nbsp;2</td> <td class="src"><pre class="src">&nbsp; Collections.sort(engine.getDependencies());</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;233</td> <td class="nbHitsCovered">&nbsp;2</td> <td class="src"><pre class="src">&nbsp; }</pre></td></tr>
<tr> <td class="numLine">&nbsp;234</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;</pre></td></tr>
<tr> <td class="numLine">&nbsp;235</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; }</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;236</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; }</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;237</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; }</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;238</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; Collections.sort(engine.getDependencies());</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;239</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; }</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;240</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;</pre></td></tr>
<tr> <td class="numLine">&nbsp;241</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; <span class="comment">/**</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;242</td> <td class="nbHits">&nbsp;</td>
<tr> <td class="numLine">&nbsp;236</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> * Retrieves the next temporary directory to extract an archive too.</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;243</td> <td class="nbHits">&nbsp;</td>
<tr> <td class="numLine">&nbsp;237</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> *</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;244</td> <td class="nbHits">&nbsp;</td>
<tr> <td class="numLine">&nbsp;238</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> * @return a directory</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;245</td> <td class="nbHits">&nbsp;</td>
<tr> <td class="numLine">&nbsp;239</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> * @throws AnalysisException thrown if unable to create temporary directory</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;246</td> <td class="nbHits">&nbsp;</td>
<tr> <td class="numLine">&nbsp;240</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> */</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;247</td> <td class="nbHits">&nbsp;</td>
<tr> <td class="numLine">&nbsp;241</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; <span class="keyword">private</span> File getNextTempDirectory() <span class="keyword">throws</span> AnalysisException {</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;248</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; dirCount += 1;</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;249</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; <span class="keyword">final</span> File directory = <span class="keyword">new</span> File(tempFileLocation, String.valueOf(dirCount));</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;250</td> <td class="nbHits">&nbsp;</td>
<tr> <td class="numLineCover">&nbsp;242</td> <td class="nbHitsCovered">&nbsp;2</td> <td class="src"><pre class="src">&nbsp; dirCount += 1;</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;243</td> <td class="nbHitsCovered">&nbsp;2</td> <td class="src"><pre class="src">&nbsp; <span class="keyword">final</span> File directory = <span class="keyword">new</span> File(tempFileLocation, String.valueOf(dirCount));</pre></td></tr>
<tr> <td class="numLine">&nbsp;244</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; <span class="comment">//getting an exception for some directories not being able to be created; might be because the directory already exists?</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;251</td> <td class="nbHitsUncovered"><a title="Line 251: Conditional coverage 0% (0/2).">&nbsp;0</a></td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp;<a title="Line 251: Conditional coverage 0% (0/2)."> <span class="keyword">if</span> (directory.exists()) {</a></span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;252</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; <span class="keyword">return</span> getNextTempDirectory();</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;245</td> <td class="nbHitsUncovered"><a title="Line 245: Conditional coverage 50% (1/2).">&nbsp;2</a></td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp;<a title="Line 245: Conditional coverage 50% (1/2)."> <span class="keyword">if</span> (directory.exists()) {</a></span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;246</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; <span class="keyword">return</span> getNextTempDirectory();</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;247</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; }</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;248</td> <td class="nbHitsUncovered"><a title="Line 248: Conditional coverage 50% (1/2).">&nbsp;2</a></td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp;<a title="Line 248: Conditional coverage 50% (1/2)."> <span class="keyword">if</span> (!directory.mkdirs()) {</a></span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;249</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; <span class="keyword">final</span> String msg = String.format(<span class="string">"Unable to create temp directory '%s'."</span>, directory.getAbsolutePath());</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;250</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; <span class="keyword">throw</span> <span class="keyword">new</span> AnalysisException(msg);</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;251</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; }</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;252</td> <td class="nbHitsCovered">&nbsp;2</td> <td class="src"><pre class="src">&nbsp; <span class="keyword">return</span> directory;</pre></td></tr>
<tr> <td class="numLine">&nbsp;253</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; }</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;254</td> <td class="nbHitsUncovered"><a title="Line 254: Conditional coverage 0% (0/2).">&nbsp;0</a></td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp;<a title="Line 254: Conditional coverage 0% (0/2)."> <span class="keyword">if</span> (!directory.mkdirs()) {</a></span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;255</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; <span class="keyword">final</span> String msg = String.format(<span class="string">"Unable to create temp directory '%s'."</span>, directory.getAbsolutePath());</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;256</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; <span class="keyword">throw</span> <span class="keyword">new</span> AnalysisException(msg);</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;257</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; }</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;258</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; <span class="keyword">return</span> directory;</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;259</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; }</pre></td></tr>
<tr> <td class="numLine">&nbsp;260</td> <td class="nbHits">&nbsp;</td>
<tr> <td class="numLine">&nbsp;254</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;</pre></td></tr>
<tr> <td class="numLine">&nbsp;261</td> <td class="nbHits">&nbsp;</td>
<tr> <td class="numLine">&nbsp;255</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; <span class="comment">/**</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;262</td> <td class="nbHits">&nbsp;</td>
<tr> <td class="numLine">&nbsp;256</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> * Extracts the contents of an archive into the specified directory.</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;263</td> <td class="nbHits">&nbsp;</td>
<tr> <td class="numLine">&nbsp;257</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> *</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;264</td> <td class="nbHits">&nbsp;</td>
<tr> <td class="numLine">&nbsp;258</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> * @param archive an archive file such as a WAR or EAR</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;265</td> <td class="nbHits">&nbsp;</td>
<tr> <td class="numLine">&nbsp;259</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> * @param destination a directory to extract the contents to</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;266</td> <td class="nbHits">&nbsp;</td>
<tr> <td class="numLine">&nbsp;260</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> * @param engine the scanning engine</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;267</td> <td class="nbHits">&nbsp;</td>
<tr> <td class="numLine">&nbsp;261</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> * @throws AnalysisException thrown if the archive is not found</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;268</td> <td class="nbHits">&nbsp;</td>
<tr> <td class="numLine">&nbsp;262</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> */</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;269</td> <td class="nbHits">&nbsp;</td>
<tr> <td class="numLine">&nbsp;263</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; <span class="keyword">private</span> <span class="keyword">void</span> extractFiles(File archive, File destination, Engine engine) <span class="keyword">throws</span> AnalysisException {</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;270</td> <td class="nbHitsUncovered"><a title="Line 270: Conditional coverage 0% (0/4) [each condition: 0%, 0%].">&nbsp;0</a></td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp;<a title="Line 270: Conditional coverage 0% (0/4) [each condition: 0%, 0%]."> <span class="keyword">if</span> (archive == <span class="keyword">null</span> || destination == <span class="keyword">null</span>) {</a></span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;271</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; <span class="keyword">return</span>;</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;272</td> <td class="nbHits">&nbsp;</td>
<tr> <td class="numLineCover">&nbsp;264</td> <td class="nbHitsUncovered"><a title="Line 264: Conditional coverage 50% (2/4) [each condition: 50%, 50%].">&nbsp;2</a></td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp;<a title="Line 264: Conditional coverage 50% (2/4) [each condition: 50%, 50%]."> <span class="keyword">if</span> (archive == <span class="keyword">null</span> || destination == <span class="keyword">null</span>) {</a></span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;265</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; <span class="keyword">return</span>;</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;266</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; }</pre></td></tr>
<tr> <td class="numLine">&nbsp;273</td> <td class="nbHits">&nbsp;</td>
<tr> <td class="numLine">&nbsp;267</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;274</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; FileInputStream fis = <span class="keyword">null</span>;</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;275</td> <td class="nbHits">&nbsp;</td>
<tr> <td class="numLineCover">&nbsp;268</td> <td class="nbHitsCovered">&nbsp;2</td> <td class="src"><pre class="src">&nbsp; FileInputStream fis = <span class="keyword">null</span>;</pre></td></tr>
<tr> <td class="numLine">&nbsp;269</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; <span class="keyword">try</span> {</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;276</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; fis = <span class="keyword">new</span> FileInputStream(archive);</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;277</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; } <span class="keyword">catch</span> (FileNotFoundException ex) {</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;278</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; LOGGER.log(Level.FINE, <span class="keyword">null</span>, ex);</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;279</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; <span class="keyword">throw</span> <span class="keyword">new</span> AnalysisException(<span class="string">"Archive file was not found."</span>, ex);</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;280</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; }</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;281</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; <span class="keyword">final</span> String archiveExt = FileUtils.getFileExtension(archive.getName()).toLowerCase();</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;282</td> <td class="nbHits">&nbsp;</td>
<tr> <td class="numLineCover">&nbsp;270</td> <td class="nbHitsCovered">&nbsp;2</td> <td class="src"><pre class="src">&nbsp; fis = <span class="keyword">new</span> FileInputStream(archive);</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;271</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; } <span class="keyword">catch</span> (FileNotFoundException ex) {</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;272</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; LOGGER.log(Level.FINE, <span class="keyword">null</span>, ex);</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;273</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; <span class="keyword">throw</span> <span class="keyword">new</span> AnalysisException(<span class="string">"Archive file was not found."</span>, ex);</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;274</td> <td class="nbHitsCovered">&nbsp;2</td> <td class="src"><pre class="src">&nbsp; }</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;275</td> <td class="nbHitsCovered">&nbsp;2</td> <td class="src"><pre class="src">&nbsp; <span class="keyword">final</span> String archiveExt = FileUtils.getFileExtension(archive.getName()).toLowerCase();</pre></td></tr>
<tr> <td class="numLine">&nbsp;276</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; <span class="keyword">try</span> {</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;283</td> <td class="nbHitsUncovered"><a title="Line 283: Conditional coverage 0% (0/2).">&nbsp;0</a></td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp;<a title="Line 283: Conditional coverage 0% (0/2)."> <span class="keyword">if</span> (ZIPPABLES.contains(archiveExt)) {</a></span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;284</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; extractArchive(<span class="keyword">new</span> ZipArchiveInputStream(<span class="keyword">new</span> BufferedInputStream(fis)), destination, engine);</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;285</td> <td class="nbHitsUncovered"><a title="Line 285: Conditional coverage 0% (0/2).">&nbsp;0</a></td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp;<a title="Line 285: Conditional coverage 0% (0/2)."> } <span class="keyword">else</span> <span class="keyword">if</span> (<span class="string">"tar"</span>.equals(archiveExt)) {</a></span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;286</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; extractArchive(<span class="keyword">new</span> TarArchiveInputStream(<span class="keyword">new</span> BufferedInputStream(fis)), destination, engine);</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;287</td> <td class="nbHitsUncovered"><a title="Line 287: Conditional coverage 0% (0/4) [each condition: 0%, 0%].">&nbsp;0</a></td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp;<a title="Line 287: Conditional coverage 0% (0/4) [each condition: 0%, 0%]."> } <span class="keyword">else</span> <span class="keyword">if</span> (<span class="string">"gz"</span>.equals(archiveExt) || <span class="string">"tgz"</span>.equals(archiveExt)) {</a></span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;288</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; <span class="keyword">final</span> String uncompressedName = GzipUtils.getUncompressedFilename(archive.getName());</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;289</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; <span class="keyword">final</span> String uncompressedExt = FileUtils.getFileExtension(uncompressedName).toLowerCase();</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;290</td> <td class="nbHitsUncovered"><a title="Line 290: Conditional coverage 0% (0/2).">&nbsp;0</a></td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp;<a title="Line 290: Conditional coverage 0% (0/2)."> <span class="keyword">if</span> (engine.supportsExtension(uncompressedExt)) {</a></span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;291</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; decompressFile(<span class="keyword">new</span> GzipCompressorInputStream(<span class="keyword">new</span> BufferedInputStream(fis)), <span class="keyword">new</span> File(destination, uncompressedName));</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;292</td> <td class="nbHits">&nbsp;</td>
<tr> <td class="numLineCover">&nbsp;277</td> <td class="nbHitsUncovered"><a title="Line 277: Conditional coverage 50% (1/2).">&nbsp;2</a></td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp;<a title="Line 277: Conditional coverage 50% (1/2)."> <span class="keyword">if</span> (ZIPPABLES.contains(archiveExt)) {</a></span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;278</td> <td class="nbHitsCovered">&nbsp;2</td> <td class="src"><pre class="src">&nbsp; extractArchive(<span class="keyword">new</span> ZipArchiveInputStream(<span class="keyword">new</span> BufferedInputStream(fis)), destination, engine);</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;279</td> <td class="nbHitsUncovered"><a title="Line 279: Conditional coverage 0% (0/2).">&nbsp;0</a></td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp;<a title="Line 279: Conditional coverage 0% (0/2)."> } <span class="keyword">else</span> <span class="keyword">if</span> (<span class="string">"tar"</span>.equals(archiveExt)) {</a></span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;280</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; extractArchive(<span class="keyword">new</span> TarArchiveInputStream(<span class="keyword">new</span> BufferedInputStream(fis)), destination, engine);</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;281</td> <td class="nbHitsUncovered"><a title="Line 281: Conditional coverage 0% (0/4) [each condition: 0%, 0%].">&nbsp;0</a></td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp;<a title="Line 281: Conditional coverage 0% (0/4) [each condition: 0%, 0%]."> } <span class="keyword">else</span> <span class="keyword">if</span> (<span class="string">"gz"</span>.equals(archiveExt) || <span class="string">"tgz"</span>.equals(archiveExt)) {</a></span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;282</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; <span class="keyword">final</span> String uncompressedName = GzipUtils.getUncompressedFilename(archive.getName());</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;283</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; <span class="keyword">final</span> String uncompressedExt = FileUtils.getFileExtension(uncompressedName).toLowerCase();</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;284</td> <td class="nbHitsUncovered"><a title="Line 284: Conditional coverage 0% (0/2).">&nbsp;0</a></td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp;<a title="Line 284: Conditional coverage 0% (0/2)."> <span class="keyword">if</span> (engine.supportsExtension(uncompressedExt)) {</a></span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;285</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; decompressFile(<span class="keyword">new</span> GzipCompressorInputStream(<span class="keyword">new</span> BufferedInputStream(fis)), <span class="keyword">new</span> File(destination, uncompressedName));</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;286</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; }</pre></td></tr>
<tr> <td class="numLine">&nbsp;293</td> <td class="nbHits">&nbsp;</td>
<tr> <td class="numLine">&nbsp;287</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; }</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;294</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; } <span class="keyword">catch</span> (ArchiveExtractionException ex) {</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;295</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; <span class="keyword">final</span> String msg = String.format(<span class="string">"Exception extracting archive '%s'."</span>, archive.getName());</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;296</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; LOGGER.log(Level.WARNING, msg);</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;297</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; LOGGER.log(Level.FINE, <span class="keyword">null</span>, ex);</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;298</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; } <span class="keyword">catch</span> (IOException ex) {</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;299</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; <span class="keyword">final</span> String msg = String.format(<span class="string">"Exception reading archive '%s'."</span>, archive.getName());</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;300</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; LOGGER.log(Level.WARNING, msg);</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;301</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; LOGGER.log(Level.FINE, <span class="keyword">null</span>, ex);</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;302</td> <td class="nbHits">&nbsp;</td>
<tr> <td class="numLineCover">&nbsp;288</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; } <span class="keyword">catch</span> (ArchiveExtractionException ex) {</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;289</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; <span class="keyword">final</span> String msg = String.format(<span class="string">"Exception extracting archive '%s'."</span>, archive.getName());</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;290</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; LOGGER.log(Level.WARNING, msg);</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;291</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; LOGGER.log(Level.FINE, <span class="keyword">null</span>, ex);</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;292</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; } <span class="keyword">catch</span> (IOException ex) {</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;293</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; <span class="keyword">final</span> String msg = String.format(<span class="string">"Exception reading archive '%s'."</span>, archive.getName());</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;294</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; LOGGER.log(Level.WARNING, msg);</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;295</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; LOGGER.log(Level.FINE, <span class="keyword">null</span>, ex);</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;296</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; } <span class="keyword">finally</span> {</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;303</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; <span class="keyword">try</span> {</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;304</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; fis.close();</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;305</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; } <span class="keyword">catch</span> (IOException ex) {</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;306</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; LOGGER.log(Level.FINEST, <span class="keyword">null</span>, ex);</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;307</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; }</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;308</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; }</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;309</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; }</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;310</td> <td class="nbHits">&nbsp;</td>
<tr> <td class="numLineCover">&nbsp;297</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; <span class="keyword">try</span> {</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;298</td> <td class="nbHitsCovered">&nbsp;2</td> <td class="src"><pre class="src">&nbsp; fis.close();</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;299</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; } <span class="keyword">catch</span> (IOException ex) {</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;300</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; LOGGER.log(Level.FINEST, <span class="keyword">null</span>, ex);</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;301</td> <td class="nbHitsCovered">&nbsp;2</td> <td class="src"><pre class="src">&nbsp; }</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;302</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; }</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;303</td> <td class="nbHitsCovered">&nbsp;2</td> <td class="src"><pre class="src">&nbsp; }</pre></td></tr>
<tr> <td class="numLine">&nbsp;304</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;</pre></td></tr>
<tr> <td class="numLine">&nbsp;311</td> <td class="nbHits">&nbsp;</td>
<tr> <td class="numLine">&nbsp;305</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; <span class="comment">/**</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;312</td> <td class="nbHits">&nbsp;</td>
<tr> <td class="numLine">&nbsp;306</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> * Extracts files from an archive.</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;313</td> <td class="nbHits">&nbsp;</td>
<tr> <td class="numLine">&nbsp;307</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> *</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;314</td> <td class="nbHits">&nbsp;</td>
<tr> <td class="numLine">&nbsp;308</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> * @param input the archive to extract files from</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;315</td> <td class="nbHits">&nbsp;</td>
<tr> <td class="numLine">&nbsp;309</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> * @param destination the location to write the files too</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;316</td> <td class="nbHits">&nbsp;</td>
<tr> <td class="numLine">&nbsp;310</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> * @param engine the dependency-check engine</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;317</td> <td class="nbHits">&nbsp;</td>
<tr> <td class="numLine">&nbsp;311</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> * @throws ArchiveExtractionException thrown if there is an exception extracting files from the archive</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;318</td> <td class="nbHits">&nbsp;</td>
<tr> <td class="numLine">&nbsp;312</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> */</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;319</td> <td class="nbHits">&nbsp;</td>
<tr> <td class="numLine">&nbsp;313</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; <span class="keyword">private</span> <span class="keyword">void</span> extractArchive(ArchiveInputStream input, File destination, Engine engine) <span class="keyword">throws</span> ArchiveExtractionException {</pre></td></tr>
<tr> <td class="numLine">&nbsp;320</td> <td class="nbHits">&nbsp;</td>
<tr> <td class="numLine">&nbsp;314</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; ArchiveEntry entry;</pre></td></tr>
<tr> <td class="numLine">&nbsp;321</td> <td class="nbHits">&nbsp;</td>
<tr> <td class="numLine">&nbsp;315</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; <span class="keyword">try</span> {</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;322</td> <td class="nbHitsUncovered"><a title="Line 322: Conditional coverage 0% (0/2).">&nbsp;0</a></td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp;<a title="Line 322: Conditional coverage 0% (0/2)."> <span class="keyword">while</span> ((entry = input.getNextEntry()) != <span class="keyword">null</span>) {</a></span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;323</td> <td class="nbHitsUncovered"><a title="Line 323: Conditional coverage 0% (0/2).">&nbsp;0</a></td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp;<a title="Line 323: Conditional coverage 0% (0/2)."> <span class="keyword">if</span> (entry.isDirectory()) {</a></span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;324</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; <span class="keyword">final</span> File d = <span class="keyword">new</span> File(destination, entry.getName());</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;325</td> <td class="nbHitsUncovered"><a title="Line 325: Conditional coverage 0% (0/2).">&nbsp;0</a></td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp;<a title="Line 325: Conditional coverage 0% (0/2)."> <span class="keyword">if</span> (!d.exists()) {</a></span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;326</td> <td class="nbHitsUncovered"><a title="Line 326: Conditional coverage 0% (0/2).">&nbsp;0</a></td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp;<a title="Line 326: Conditional coverage 0% (0/2)."> <span class="keyword">if</span> (!d.mkdirs()) {</a></span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;327</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; <span class="keyword">final</span> String msg = String.format(<span class="string">"Unable to create directory '%s'."</span>, d.getAbsolutePath());</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;328</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; <span class="keyword">throw</span> <span class="keyword">new</span> AnalysisException(msg);</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;329</td> <td class="nbHits">&nbsp;</td>
<tr> <td class="numLineCover">&nbsp;316</td> <td class="nbHitsCovered"><a title="Line 316: Conditional coverage 100% (2/2).">&nbsp;887</a></td> <td class="src"><pre class="src">&nbsp;<a title="Line 316: Conditional coverage 100% (2/2)."> <span class="keyword">while</span> ((entry = input.getNextEntry()) != <span class="keyword">null</span>) {</a></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;317</td> <td class="nbHitsCovered"><a title="Line 317: Conditional coverage 100% (2/2).">&nbsp;885</a></td> <td class="src"><pre class="src">&nbsp;<a title="Line 317: Conditional coverage 100% (2/2)."> <span class="keyword">if</span> (entry.isDirectory()) {</a></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;318</td> <td class="nbHitsCovered">&nbsp;36</td> <td class="src"><pre class="src">&nbsp; <span class="keyword">final</span> File d = <span class="keyword">new</span> File(destination, entry.getName());</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;319</td> <td class="nbHitsUncovered"><a title="Line 319: Conditional coverage 50% (1/2).">&nbsp;36</a></td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp;<a title="Line 319: Conditional coverage 50% (1/2)."> <span class="keyword">if</span> (!d.exists()) {</a></span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;320</td> <td class="nbHitsUncovered"><a title="Line 320: Conditional coverage 50% (1/2).">&nbsp;36</a></td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp;<a title="Line 320: Conditional coverage 50% (1/2)."> <span class="keyword">if</span> (!d.mkdirs()) {</a></span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;321</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; <span class="keyword">final</span> String msg = String.format(<span class="string">"Unable to create directory '%s'."</span>, d.getAbsolutePath());</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;322</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; <span class="keyword">throw</span> <span class="keyword">new</span> AnalysisException(msg);</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;323</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; }</pre></td></tr>
<tr> <td class="numLine">&nbsp;324</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; }</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;325</td> <td class="nbHitsCovered">&nbsp;36</td> <td class="src"><pre class="src">&nbsp; } <span class="keyword">else</span> {</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;326</td> <td class="nbHitsCovered">&nbsp;849</td> <td class="src"><pre class="src">&nbsp; <span class="keyword">final</span> File file = <span class="keyword">new</span> File(destination, entry.getName());</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;327</td> <td class="nbHitsCovered">&nbsp;849</td> <td class="src"><pre class="src">&nbsp; <span class="keyword">final</span> String ext = FileUtils.getFileExtension(file.getName());</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;328</td> <td class="nbHitsUncovered"><a title="Line 328: Conditional coverage 50% (1/2).">&nbsp;849</a></td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp;<a title="Line 328: Conditional coverage 50% (1/2)."> <span class="keyword">if</span> (engine.supportsExtension(ext)) {</a></span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;329</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; BufferedOutputStream bos = <span class="keyword">null</span>;</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;330</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; }</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;331</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; } <span class="keyword">else</span> {</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;332</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; <span class="keyword">final</span> File file = <span class="keyword">new</span> File(destination, entry.getName());</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;333</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; <span class="keyword">final</span> String ext = FileUtils.getFileExtension(file.getName());</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;334</td> <td class="nbHitsUncovered"><a title="Line 334: Conditional coverage 0% (0/2).">&nbsp;0</a></td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp;<a title="Line 334: Conditional coverage 0% (0/2)."> <span class="keyword">if</span> (engine.supportsExtension(ext)) {</a></span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;335</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; BufferedOutputStream bos = <span class="keyword">null</span>;</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;336</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; FileOutputStream fos;</pre></td></tr>
<tr> <td class="numLine">&nbsp;337</td> <td class="nbHits">&nbsp;</td>
<tr> <td class="numLine">&nbsp;331</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; <span class="keyword">try</span> {</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;338</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; <span class="keyword">final</span> File parent = file.getParentFile();</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;339</td> <td class="nbHitsUncovered"><a title="Line 339: Conditional coverage 0% (0/2).">&nbsp;0</a></td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp;<a title="Line 339: Conditional coverage 0% (0/2)."> <span class="keyword">if</span> (!parent.isDirectory()) {</a></span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;340</td> <td class="nbHitsUncovered"><a title="Line 340: Conditional coverage 0% (0/2).">&nbsp;0</a></td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp;<a title="Line 340: Conditional coverage 0% (0/2)."> <span class="keyword">if</span> (!parent.mkdirs()) {</a></span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;341</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; <span class="keyword">final</span> String msg = String.format(<span class="string">"Unable to build directory '%s'."</span>, parent.getAbsolutePath());</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;342</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; <span class="keyword">throw</span> <span class="keyword">new</span> AnalysisException(msg);</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;343</td> <td class="nbHits">&nbsp;</td>
<tr> <td class="numLineCover">&nbsp;332</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; <span class="keyword">final</span> File parent = file.getParentFile();</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;333</td> <td class="nbHitsUncovered"><a title="Line 333: Conditional coverage 0% (0/2).">&nbsp;0</a></td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp;<a title="Line 333: Conditional coverage 0% (0/2)."> <span class="keyword">if</span> (!parent.isDirectory()) {</a></span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;334</td> <td class="nbHitsUncovered"><a title="Line 334: Conditional coverage 0% (0/2).">&nbsp;0</a></td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp;<a title="Line 334: Conditional coverage 0% (0/2)."> <span class="keyword">if</span> (!parent.mkdirs()) {</a></span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;335</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; <span class="keyword">final</span> String msg = String.format(<span class="string">"Unable to build directory '%s'."</span>, parent.getAbsolutePath());</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;336</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; <span class="keyword">throw</span> <span class="keyword">new</span> AnalysisException(msg);</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;337</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; }</pre></td></tr>
<tr> <td class="numLine">&nbsp;344</td> <td class="nbHits">&nbsp;</td>
<tr> <td class="numLine">&nbsp;338</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; }</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;345</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; fos = <span class="keyword">new</span> FileOutputStream(file);</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;346</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; bos = <span class="keyword">new</span> BufferedOutputStream(fos, BUFFER_SIZE);</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;347</td> <td class="nbHits">&nbsp;</td>
<tr> <td class="numLineCover">&nbsp;339</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; fos = <span class="keyword">new</span> FileOutputStream(file);</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;340</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; bos = <span class="keyword">new</span> BufferedOutputStream(fos, BUFFER_SIZE);</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;341</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; <span class="keyword">int</span> count;</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;348</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; <span class="keyword">final</span> <span class="keyword">byte</span> data[] = <span class="keyword">new</span> <span class="keyword">byte</span>[BUFFER_SIZE];</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;349</td> <td class="nbHitsUncovered"><a title="Line 349: Conditional coverage 0% (0/2).">&nbsp;0</a></td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp;<a title="Line 349: Conditional coverage 0% (0/2)."> <span class="keyword">while</span> ((count = input.read(data, 0, BUFFER_SIZE)) != -1) {</a></span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;350</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; bos.write(data, 0, count);</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;351</td> <td class="nbHits">&nbsp;</td>
<tr> <td class="numLineCover">&nbsp;342</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; <span class="keyword">final</span> <span class="keyword">byte</span> data[] = <span class="keyword">new</span> <span class="keyword">byte</span>[BUFFER_SIZE];</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;343</td> <td class="nbHitsUncovered"><a title="Line 343: Conditional coverage 0% (0/2).">&nbsp;0</a></td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp;<a title="Line 343: Conditional coverage 0% (0/2)."> <span class="keyword">while</span> ((count = input.read(data, 0, BUFFER_SIZE)) != -1) {</a></span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;344</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; bos.write(data, 0, count);</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;345</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; }</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;352</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; bos.flush();</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;353</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; } <span class="keyword">catch</span> (FileNotFoundException ex) {</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;354</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; Logger.getLogger(ArchiveAnalyzer.<span class="keyword">class</span></span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;346</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; bos.flush();</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;347</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; } <span class="keyword">catch</span> (FileNotFoundException ex) {</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;348</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; LOGGER.log(Level.FINE, <span class="keyword">null</span>, ex);</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;349</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; <span class="keyword">final</span> String msg = String.format(<span class="string">"Unable to find file '%s'."</span>, file.getName());</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;350</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; <span class="keyword">throw</span> <span class="keyword">new</span> AnalysisException(msg, ex);</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;351</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; } <span class="keyword">catch</span> (IOException ex) {</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;352</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; LOGGER.log(Level.FINE, <span class="keyword">null</span>, ex);</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;353</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; <span class="keyword">final</span> String msg = String.format(<span class="string">"IO Exception while parsing file '%s'."</span>, file.getName());</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;354</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; <span class="keyword">throw</span> <span class="keyword">new</span> AnalysisException(msg, ex);</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;355</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; .getName()).log(Level.FINE, <span class="keyword">null</span>, ex);</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;356</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; <span class="keyword">final</span> String msg = String.format(<span class="string">"Unable to find file '%s'."</span>, file.getName());</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;357</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; <span class="keyword">throw</span> <span class="keyword">new</span> AnalysisException(msg, ex);</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;358</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; } <span class="keyword">catch</span> (IOException ex) {</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;359</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; Logger.getLogger(ArchiveAnalyzer.<span class="keyword">class</span></span></pre></td></tr>
<tr> <td class="numLine">&nbsp;360</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; .getName()).log(Level.FINE, <span class="keyword">null</span>, ex);</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;361</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; <span class="keyword">final</span> String msg = String.format(<span class="string">"IO Exception while parsing file '%s'."</span>, file.getName());</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;362</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; <span class="keyword">throw</span> <span class="keyword">new</span> AnalysisException(msg, ex);</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;363</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; } <span class="keyword">finally</span> {</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;364</td> <td class="nbHitsUncovered"><a title="Line 364: Conditional coverage 0% (0/4) [each condition: 0%, 0%].">&nbsp;0</a></td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp;<a title="Line 364: Conditional coverage 0% (0/4) [each condition: 0%, 0%]."> <span class="keyword">if</span> (bos != <span class="keyword">null</span>) {</a></span></pre></td></tr>
<tr> <td class="numLine">&nbsp;365</td> <td class="nbHits">&nbsp;</td>
<tr> <td class="numLineCover">&nbsp;356</td> <td class="nbHitsUncovered"><a title="Line 356: Conditional coverage 0% (0/4) [each condition: 0%, 0%].">&nbsp;0</a></td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp;<a title="Line 356: Conditional coverage 0% (0/4) [each condition: 0%, 0%]."> <span class="keyword">if</span> (bos != <span class="keyword">null</span>) {</a></span></pre></td></tr>
<tr> <td class="numLine">&nbsp;357</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; <span class="keyword">try</span> {</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;366</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; bos.close();</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;367</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; } <span class="keyword">catch</span> (IOException ex) {</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;368</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; Logger.getLogger(ArchiveAnalyzer.<span class="keyword">class</span></span></pre></td></tr>
<tr> <td class="numLine">&nbsp;369</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; .getName()).log(Level.FINEST, <span class="keyword">null</span>, ex);</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;370</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; }</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;371</td> <td class="nbHits">&nbsp;</td>
<tr> <td class="numLineCover">&nbsp;358</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; bos.close();</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;359</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; } <span class="keyword">catch</span> (IOException ex) {</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;360</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; LOGGER.log(Level.FINEST, <span class="keyword">null</span>, ex);</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;361</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; }</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;362</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; }</pre></td></tr>
<tr> <td class="numLine">&nbsp;372</td> <td class="nbHits">&nbsp;</td>
<tr> <td class="numLine">&nbsp;363</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; }</pre></td></tr>
<tr> <td class="numLine">&nbsp;373</td> <td class="nbHits">&nbsp;</td>
<tr> <td class="numLine">&nbsp;364</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; }</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;374</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; }</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;375</td> <td class="nbHits">&nbsp;</td>
<tr> <td class="numLineCover">&nbsp;365</td> <td class="nbHitsCovered">&nbsp;849</td> <td class="src"><pre class="src">&nbsp; }</pre></td></tr>
<tr> <td class="numLine">&nbsp;366</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; }</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;376</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; } <span class="keyword">catch</span> (IOException ex) {</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;377</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; <span class="keyword">throw</span> <span class="keyword">new</span> ArchiveExtractionException(ex);</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;378</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; } <span class="keyword">catch</span> (Throwable ex) {</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;379</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; <span class="keyword">throw</span> <span class="keyword">new</span> ArchiveExtractionException(ex);</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;380</td> <td class="nbHits">&nbsp;</td>
<tr> <td class="numLineCover">&nbsp;367</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; } <span class="keyword">catch</span> (IOException ex) {</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;368</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; <span class="keyword">throw</span> <span class="keyword">new</span> ArchiveExtractionException(ex);</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;369</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; } <span class="keyword">catch</span> (Throwable ex) {</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;370</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; <span class="keyword">throw</span> <span class="keyword">new</span> ArchiveExtractionException(ex);</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;371</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; } <span class="keyword">finally</span> {</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;381</td> <td class="nbHitsUncovered"><a title="Line 381: Conditional coverage 0% (0/4) [each condition: 0%, 0%].">&nbsp;0</a></td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp;<a title="Line 381: Conditional coverage 0% (0/4) [each condition: 0%, 0%]."> <span class="keyword">if</span> (input != <span class="keyword">null</span>) {</a></span></pre></td></tr>
<tr> <td class="numLine">&nbsp;382</td> <td class="nbHits">&nbsp;</td>
<tr> <td class="numLineCover">&nbsp;372</td> <td class="nbHitsUncovered"><a title="Line 372: Conditional coverage 25% (1/4) [each condition: 50%, 0%].">&nbsp;2</a></td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp;<a title="Line 372: Conditional coverage 25% (1/4) [each condition: 50%, 0%]."> <span class="keyword">if</span> (input != <span class="keyword">null</span>) {</a></span></pre></td></tr>
<tr> <td class="numLine">&nbsp;373</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; <span class="keyword">try</span> {</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;383</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; input.close();</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;384</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; } <span class="keyword">catch</span> (IOException ex) {</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;385</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; LOGGER.log(Level.FINEST, <span class="keyword">null</span>, ex);</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;386</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; }</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;387</td> <td class="nbHits">&nbsp;</td>
<tr> <td class="numLineCover">&nbsp;374</td> <td class="nbHitsCovered">&nbsp;2</td> <td class="src"><pre class="src">&nbsp; input.close();</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;375</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; } <span class="keyword">catch</span> (IOException ex) {</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;376</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; LOGGER.log(Level.FINEST, <span class="keyword">null</span>, ex);</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;377</td> <td class="nbHitsCovered">&nbsp;2</td> <td class="src"><pre class="src">&nbsp; }</pre></td></tr>
<tr> <td class="numLine">&nbsp;378</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; }</pre></td></tr>
<tr> <td class="numLine">&nbsp;388</td> <td class="nbHits">&nbsp;</td>
<tr> <td class="numLine">&nbsp;379</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; }</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;389</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; }</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;390</td> <td class="nbHits">&nbsp;</td>
<tr> <td class="numLineCover">&nbsp;380</td> <td class="nbHitsCovered">&nbsp;2</td> <td class="src"><pre class="src">&nbsp; }</pre></td></tr>
<tr> <td class="numLine">&nbsp;381</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;</pre></td></tr>
<tr> <td class="numLine">&nbsp;391</td> <td class="nbHits">&nbsp;</td>
<tr> <td class="numLine">&nbsp;382</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; <span class="comment">/**</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;392</td> <td class="nbHits">&nbsp;</td>
<tr> <td class="numLine">&nbsp;383</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> * Decompresses a file.</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;393</td> <td class="nbHits">&nbsp;</td>
<tr> <td class="numLine">&nbsp;384</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> *</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;394</td> <td class="nbHits">&nbsp;</td>
<tr> <td class="numLine">&nbsp;385</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> * @param inputStream the compressed file</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;395</td> <td class="nbHits">&nbsp;</td>
<tr> <td class="numLine">&nbsp;386</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> * @param outputFile the location to write the decompressed file</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;396</td> <td class="nbHits">&nbsp;</td>
<tr> <td class="numLine">&nbsp;387</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> * @throws ArchiveExtractionException thrown if there is an exception decompressing the file</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;397</td> <td class="nbHits">&nbsp;</td>
<tr> <td class="numLine">&nbsp;388</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> */</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;398</td> <td class="nbHits">&nbsp;</td>
<tr> <td class="numLine">&nbsp;389</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; <span class="keyword">private</span> <span class="keyword">void</span> decompressFile(CompressorInputStream inputStream, File outputFile) <span class="keyword">throws</span> ArchiveExtractionException {</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;399</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; FileOutputStream out = <span class="keyword">null</span>;</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;400</td> <td class="nbHits">&nbsp;</td>
<tr> <td class="numLineCover">&nbsp;390</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; FileOutputStream out = <span class="keyword">null</span>;</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;391</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; <span class="keyword">try</span> {</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;401</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; out = <span class="keyword">new</span> FileOutputStream(outputFile);</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;402</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; <span class="keyword">final</span> <span class="keyword">byte</span>[] buffer = <span class="keyword">new</span> <span class="keyword">byte</span>[BUFFER_SIZE];</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;403</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; <span class="keyword">int</span> n = 0;</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;404</td> <td class="nbHitsUncovered"><a title="Line 404: Conditional coverage 0% (0/2).">&nbsp;0</a></td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp;<a title="Line 404: Conditional coverage 0% (0/2)."> <span class="keyword">while</span> (-1 != (n = inputStream.read(buffer))) {</a></span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;405</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; out.write(buffer, 0, n);</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;406</td> <td class="nbHits">&nbsp;</td>
<tr> <td class="numLineCover">&nbsp;392</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; out = <span class="keyword">new</span> FileOutputStream(outputFile);</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;393</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; <span class="keyword">final</span> <span class="keyword">byte</span>[] buffer = <span class="keyword">new</span> <span class="keyword">byte</span>[BUFFER_SIZE];</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;394</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; <span class="keyword">int</span> n = 0;</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;395</td> <td class="nbHitsUncovered"><a title="Line 395: Conditional coverage 0% (0/2).">&nbsp;0</a></td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp;<a title="Line 395: Conditional coverage 0% (0/2)."> <span class="keyword">while</span> (-1 != (n = inputStream.read(buffer))) {</a></span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;396</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; out.write(buffer, 0, n);</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;397</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; }</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;407</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; } <span class="keyword">catch</span> (FileNotFoundException ex) {</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;408</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; LOGGER.log(Level.FINE, <span class="keyword">null</span>, ex);</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;409</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; <span class="keyword">throw</span> <span class="keyword">new</span> ArchiveExtractionException(ex);</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;410</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; } <span class="keyword">catch</span> (IOException ex) {</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;411</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; LOGGER.log(Level.FINE, <span class="keyword">null</span>, ex);</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;412</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; <span class="keyword">throw</span> <span class="keyword">new</span> ArchiveExtractionException(ex);</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;413</td> <td class="nbHits">&nbsp;</td>
<tr> <td class="numLineCover">&nbsp;398</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; } <span class="keyword">catch</span> (FileNotFoundException ex) {</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;399</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; LOGGER.log(Level.FINE, <span class="keyword">null</span>, ex);</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;400</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; <span class="keyword">throw</span> <span class="keyword">new</span> ArchiveExtractionException(ex);</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;401</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; } <span class="keyword">catch</span> (IOException ex) {</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;402</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; LOGGER.log(Level.FINE, <span class="keyword">null</span>, ex);</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;403</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; <span class="keyword">throw</span> <span class="keyword">new</span> ArchiveExtractionException(ex);</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;404</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; } <span class="keyword">finally</span> {</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;414</td> <td class="nbHitsUncovered"><a title="Line 414: Conditional coverage 0% (0/4) [each condition: 0%, 0%].">&nbsp;0</a></td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp;<a title="Line 414: Conditional coverage 0% (0/4) [each condition: 0%, 0%]."> <span class="keyword">if</span> (out != <span class="keyword">null</span>) {</a></span></pre></td></tr>
<tr> <td class="numLine">&nbsp;415</td> <td class="nbHits">&nbsp;</td>
<tr> <td class="numLineCover">&nbsp;405</td> <td class="nbHitsUncovered"><a title="Line 405: Conditional coverage 0% (0/4) [each condition: 0%, 0%].">&nbsp;0</a></td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp;<a title="Line 405: Conditional coverage 0% (0/4) [each condition: 0%, 0%]."> <span class="keyword">if</span> (out != <span class="keyword">null</span>) {</a></span></pre></td></tr>
<tr> <td class="numLine">&nbsp;406</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; <span class="keyword">try</span> {</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;416</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; out.close();</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;417</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; } <span class="keyword">catch</span> (IOException ex) {</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;418</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; LOGGER.log(Level.FINEST, <span class="keyword">null</span>, ex);</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;419</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; }</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;420</td> <td class="nbHits">&nbsp;</td>
<tr> <td class="numLineCover">&nbsp;407</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; out.close();</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;408</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; } <span class="keyword">catch</span> (IOException ex) {</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;409</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; LOGGER.log(Level.FINEST, <span class="keyword">null</span>, ex);</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;410</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; }</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;411</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; }</pre></td></tr>
<tr> <td class="numLine">&nbsp;421</td> <td class="nbHits">&nbsp;</td>
<tr> <td class="numLine">&nbsp;412</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; }</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;422</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; }</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;423</td> <td class="nbHits">&nbsp;</td>
<tr> <td class="numLineCover">&nbsp;413</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; }</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;414</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;}</pre></td></tr>
</table>
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