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Jeremy Long
2015-04-13 17:43:19 -04:00
parent 480a05c798
commit 9194a42c93
1126 changed files with 34228 additions and 29019 deletions
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dependency-check-cli/cobertura/org.owasp.dependencycheck.App.html
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@@ -12,7 +12,7 @@
<div class="separator">&nbsp;</div>
<table class="report">
<thead><tr> <td class="heading">Classes in this File</td> <td class="heading"><a class="dfn" href="help.html" onclick="popupwindow('help.html'); return false;">Line Coverage</a></td> <td class="heading"><a class="dfn" href="help.html" onclick="popupwindow('help.html'); return false;">Branch Coverage</a></td> <td class="heading"><a class="dfn" href="help.html" onclick="popupwindow('help.html'); return false;">Complexity</a></td></tr></thead>
<tr><td><a href="org.owasp.dependencycheck.App.html">App</a></td><td><table cellpadding="0px" cellspacing="0px" class="percentgraph"><tr class="percentgraph"><td align="right" class="percentgraph" width="40">0%</td><td class="percentgraph"><div class="percentgraph"><div class="greenbar" style="width:0px"><span class="text">0/181</span></div></div></td></tr></table></td><td><table cellpadding="0px" cellspacing="0px" class="percentgraph"><tr class="percentgraph"><td align="right" class="percentgraph" width="40">0%</td><td class="percentgraph"><div class="percentgraph"><div class="greenbar" style="width:0px"><span class="text">0/114</span></div></div></td></tr></table></td><td class="value"><span class="hidden">16.75;</span>16.75</td></tr>
<tr><td><a href="org.owasp.dependencycheck.App.html">App</a></td><td><table cellpadding="0px" cellspacing="0px" class="percentgraph"><tr class="percentgraph"><td align="right" class="percentgraph" width="40">0%</td><td class="percentgraph"><div class="percentgraph"><div class="greenbar" style="width:0px"><span class="text">0/193</span></div></div></td></tr></table></td><td><table cellpadding="0px" cellspacing="0px" class="percentgraph"><tr class="percentgraph"><td align="right" class="percentgraph" width="40">0%</td><td class="percentgraph"><div class="percentgraph"><div class="greenbar" style="width:0px"><span class="text">0/118</span></div></div></td></tr></table></td><td class="value"><span class="hidden">14.2;</span>14.2</td></tr>
</table>
<div class="separator">&nbsp;</div>
@@ -104,7 +104,7 @@
<tr> <td class="numLine">&nbsp;43</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> *</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;44</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> * @author Jeremy Long &lt;jeremy.long@owasp.org&gt;</span></pre></td></tr>
<td class="src"><pre class="src">&nbsp;<span class="comment"> * @author Jeremy Long</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;45</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> */</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;46</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp;<span class="keyword">public</span> <span class="keyword">class</span> App {</span></pre></td></tr>
@@ -188,316 +188,346 @@
<td class="src"><pre class="src">&nbsp;</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;96</td> <td class="nbHitsUncovered"><a title="Line 96: Conditional coverage 0% (0/2).">&nbsp;0</a></td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp;<a title="Line 96: Conditional coverage 0% (0/2)."> <span class="keyword">if</span> (cli.isGetVersion()) {</a></span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;97</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; cli.printVersionInfo();</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;98</td> <td class="nbHitsUncovered"><a title="Line 98: Conditional coverage 0% (0/2).">&nbsp;0</a></td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp;<a title="Line 98: Conditional coverage 0% (0/2)."> } <span class="keyword">else</span> <span class="keyword">if</span> (cli.isRunScan()) {</a></span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;98</td> <td class="nbHitsUncovered"><a title="Line 98: Conditional coverage 0% (0/2).">&nbsp;0</a></td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp;<a title="Line 98: Conditional coverage 0% (0/2)."> } <span class="keyword">else</span> <span class="keyword">if</span> (cli.isUpdateOnly()) {</a></span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;99</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; populateSettings(cli);</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;100</td> <td class="nbHits">&nbsp;</td>
<tr> <td class="numLineCover">&nbsp;100</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; runUpdateOnly();</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;101</td> <td class="nbHitsUncovered"><a title="Line 101: Conditional coverage 0% (0/2).">&nbsp;0</a></td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp;<a title="Line 101: Conditional coverage 0% (0/2)."> } <span class="keyword">else</span> <span class="keyword">if</span> (cli.isRunScan()) {</a></span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;102</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; populateSettings(cli);</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;103</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; <span class="keyword">try</span> {</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;101</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; runScan(cli.getReportDirectory(), cli.getReportFormat(), cli.getApplicationName(), cli.getScanFiles(), cli.getExcludeList());</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;102</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; } <span class="keyword">catch</span> (InvalidScanPathException ex) {</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;103</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; Logger.getLogger(App.<span class="keyword">class</span>.getName()).log(Level.SEVERE, <span class="string">"An invalid scan path was detected; unable to scan '//*' paths"</span>);</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;104</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; }</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;105</td> <td class="nbHits">&nbsp;</td>
<tr> <td class="numLineCover">&nbsp;104</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; runScan(cli.getReportDirectory(), cli.getReportFormat(), cli.getApplicationName(), cli.getScanFiles(), cli.getExcludeList());</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;105</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; } <span class="keyword">catch</span> (InvalidScanPathException ex) {</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;106</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; Logger.getLogger(App.<span class="keyword">class</span>.getName()).log(Level.SEVERE, <span class="string">"An invalid scan path was detected; unable to scan '//*' paths"</span>);</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;107</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; }</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;108</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; } <span class="keyword">else</span> {</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;106</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; cli.printHelp();</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;107</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; }</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;108</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; }</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;109</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;109</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; cli.printHelp();</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;110</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; <span class="comment">/**</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;111</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> * Scans the specified directories and writes the dependency reports to the reportDirectory.</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;112</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> *</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;113</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> * @param reportDirectory the path to the directory where the reports will be written</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;114</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> * @param outputFormat the output format of the report</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;115</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> * @param applicationName the application name for the report</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;116</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> * @param files the files/directories to scan</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;117</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> * @param excludes the patterns for files/directories to exclude</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;118</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> *</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;119</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> * @throws InvalidScanPathException thrown if the path to scan starts with "//"</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;120</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> */</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;121</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; <span class="keyword">private</span> <span class="keyword">void</span> runScan(String reportDirectory, String outputFormat, String applicationName, String[] files,</pre></td></tr>
<tr> <td class="numLine">&nbsp;122</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; String[] excludes) <span class="keyword">throws</span> InvalidScanPathException {</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;123</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; Engine engine = <span class="keyword">null</span>;</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;124</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; <span class="keyword">try</span> {</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;125</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; engine = <span class="keyword">new</span> Engine();</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;126</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; List&lt;String&gt; antStylePaths = <span class="keyword">new</span> ArrayList&lt;String&gt;();</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;127</td> <td class="nbHitsUncovered"><a title="Line 127: Conditional coverage 0% (0/4) [each condition: 0%, 0%].">&nbsp;0</a></td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp;<a title="Line 127: Conditional coverage 0% (0/4) [each condition: 0%, 0%]."> <span class="keyword">if</span> (excludes == <span class="keyword">null</span> || excludes.length == 0) {</a></span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;128</td> <td class="nbHitsUncovered"><a title="Line 128: Conditional coverage 0% (0/2).">&nbsp;0</a></td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp;<a title="Line 128: Conditional coverage 0% (0/2)."> <span class="keyword">for</span> (String file : files) {</a></span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;129</td> <td class="nbHitsUncovered"><a title="Line 129: Conditional coverage 0% (0/4) [each condition: 0%, 0%].">&nbsp;0</a></td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp;<a title="Line 129: Conditional coverage 0% (0/4) [each condition: 0%, 0%]."> <span class="keyword">if</span> (file.contains(<span class="string">"*"</span>) || file.contains(<span class="string">"?"</span>)) {</a></span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;130</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; antStylePaths.add(file);</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;131</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; } <span class="keyword">else</span> {</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;132</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; engine.scan(file);</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;133</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; }</pre></td></tr>
<tr> <td class="numLine">&nbsp;134</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; }</pre></td></tr>
<tr> <td class="numLine">&nbsp;135</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; } <span class="keyword">else</span> {</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;136</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; antStylePaths = Arrays.asList(files);</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;137</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; }</pre></td></tr>
<tr> <td class="numLine">&nbsp;138</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;139</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; <span class="keyword">final</span> Set&lt;File&gt; paths = <span class="keyword">new</span> HashSet&lt;File&gt;();</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;140</td> <td class="nbHitsUncovered"><a title="Line 140: Conditional coverage 0% (0/2).">&nbsp;0</a></td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp;<a title="Line 140: Conditional coverage 0% (0/2)."> <span class="keyword">for</span> (String file : antStylePaths) {</a></span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;141</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; <span class="keyword">final</span> DirectoryScanner scanner = <span class="keyword">new</span> DirectoryScanner();</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;142</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; String include = file.replace(<span class="string">'\\'</span>, <span class="string">'/'</span>);</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;143</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; File baseDir;</pre></td></tr>
<tr> <td class="numLine">&nbsp;144</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;145</td> <td class="nbHitsUncovered"><a title="Line 145: Conditional coverage 0% (0/2).">&nbsp;0</a></td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp;<a title="Line 145: Conditional coverage 0% (0/2)."> <span class="keyword">if</span> (include.startsWith(<span class="string">"//"</span>)) {</a></span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;146</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; <span class="keyword">throw</span> <span class="keyword">new</span> InvalidScanPathException(<span class="string">"Unable to scan paths specified by //"</span>);</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;147</td> <td class="nbHitsUncovered"><a title="Line 147: Conditional coverage 0% (0/2).">&nbsp;0</a></td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp;<a title="Line 147: Conditional coverage 0% (0/2)."> } <span class="keyword">else</span> <span class="keyword">if</span> (include.startsWith(<span class="string">"./"</span>)) {</a></span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;148</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; baseDir = <span class="keyword">new</span> File(<span class="string">"."</span>);</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;149</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; include = include.substring(2);</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;150</td> <td class="nbHitsUncovered"><a title="Line 150: Conditional coverage 0% (0/2).">&nbsp;0</a></td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp;<a title="Line 150: Conditional coverage 0% (0/2)."> } <span class="keyword">else</span> <span class="keyword">if</span> (include.startsWith(<span class="string">"/"</span>)) {</a></span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;151</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; baseDir = <span class="keyword">new</span> File(<span class="string">"/"</span>);</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;152</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; include = include.substring(1);</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;153</td> <td class="nbHitsUncovered"><a title="Line 153: Conditional coverage 0% (0/2).">&nbsp;0</a></td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp;<a title="Line 153: Conditional coverage 0% (0/2)."> } <span class="keyword">else</span> <span class="keyword">if</span> (include.contains(<span class="string">"/"</span>)) {</a></span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;154</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; <span class="keyword">final</span> <span class="keyword">int</span> pos = include.indexOf(<span class="string">'/'</span>);</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;155</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; <span class="keyword">final</span> String tmp = include.substring(0, pos);</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;156</td> <td class="nbHitsUncovered"><a title="Line 156: Conditional coverage 0% (0/4) [each condition: 0%, 0%].">&nbsp;0</a></td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp;<a title="Line 156: Conditional coverage 0% (0/4) [each condition: 0%, 0%]."> <span class="keyword">if</span> (tmp.contains(<span class="string">"*"</span>) || tmp.contains(<span class="string">"?"</span>)) {</a></span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;157</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; baseDir = <span class="keyword">new</span> File(<span class="string">"."</span>);</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;158</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; } <span class="keyword">else</span> {</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;159</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; baseDir = <span class="keyword">new</span> File(tmp);</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;160</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; include = include.substring(pos + 1);</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;161</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; }</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;162</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; } <span class="keyword">else</span> { <span class="comment">//no path info - must just be a file in the working directory</span></span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;163</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; baseDir = <span class="keyword">new</span> File(<span class="string">"."</span>);</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;164</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; }</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;165</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; scanner.setBasedir(baseDir);</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;166</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; scanner.setIncludes(include);</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;167</td> <td class="nbHitsUncovered"><a title="Line 167: Conditional coverage 0% (0/4) [each condition: 0%, 0%].">&nbsp;0</a></td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp;<a title="Line 167: Conditional coverage 0% (0/4) [each condition: 0%, 0%]."> <span class="keyword">if</span> (excludes != <span class="keyword">null</span> &amp;&amp; excludes.length &gt; 0) {</a></span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;168</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; scanner.addExcludes(excludes);</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;169</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; }</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;170</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; scanner.scan();</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;171</td> <td class="nbHitsUncovered"><a title="Line 171: Conditional coverage 0% (0/2).">&nbsp;0</a></td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp;<a title="Line 171: Conditional coverage 0% (0/2)."> <span class="keyword">if</span> (scanner.getIncludedFilesCount() &gt; 0) {</a></span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;172</td> <td class="nbHitsUncovered"><a title="Line 172: Conditional coverage 0% (0/2).">&nbsp;0</a></td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp;<a title="Line 172: Conditional coverage 0% (0/2)."> <span class="keyword">for</span> (String s : scanner.getIncludedFiles()) {</a></span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;173</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; <span class="keyword">final</span> File f = <span class="keyword">new</span> File(baseDir, s);</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;174</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; paths.add(f);</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;175</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; }</pre></td></tr>
<tr> <td class="numLine">&nbsp;176</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; }</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;177</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; }</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;178</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; engine.scan(paths);</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;179</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;180</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; engine.analyzeDependencies();</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;181</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; <span class="keyword">final</span> List&lt;Dependency&gt; dependencies = engine.getDependencies();</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;182</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; DatabaseProperties prop = <span class="keyword">null</span>;</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;183</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; CveDB cve = <span class="keyword">null</span>;</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;184</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; <span class="keyword">try</span> {</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;185</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; cve = <span class="keyword">new</span> CveDB();</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;186</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; cve.open();</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;187</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; prop = cve.getDatabaseProperties();</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;188</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; } <span class="keyword">catch</span> (DatabaseException ex) {</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;189</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; LOGGER.log(Level.FINE, <span class="string">"Unable to retrieve DB Properties"</span>, ex);</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;190</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; } <span class="keyword">finally</span> {</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;191</td> <td class="nbHitsUncovered"><a title="Line 191: Conditional coverage 0% (0/2).">&nbsp;0</a></td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp;<a title="Line 191: Conditional coverage 0% (0/2)."> <span class="keyword">if</span> (cve != <span class="keyword">null</span>) {</a></span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;192</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; cve.close();</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;193</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; }</pre></td></tr>
<tr> <td class="numLine">&nbsp;194</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; }</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;195</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; <span class="keyword">final</span> ReportGenerator report = <span class="keyword">new</span> ReportGenerator(applicationName, dependencies, engine.getAnalyzers(), prop);</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;196</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; <span class="keyword">try</span> {</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;197</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; report.generateReports(reportDirectory, outputFormat);</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;198</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; } <span class="keyword">catch</span> (IOException ex) {</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;199</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; LOGGER.log(Level.SEVERE, <span class="string">"There was an IO error while attempting to generate the report."</span>);</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;200</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; LOGGER.log(Level.FINE, <span class="keyword">null</span>, ex);</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;201</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; } <span class="keyword">catch</span> (Throwable ex) {</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;202</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; LOGGER.log(Level.SEVERE, <span class="string">"There was an error while attempting to generate the report."</span>);</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;203</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; LOGGER.log(Level.FINE, <span class="keyword">null</span>, ex);</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;204</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; }</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;205</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; } <span class="keyword">catch</span> (DatabaseException ex) {</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;206</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; LOGGER.log(Level.SEVERE, <span class="string">"Unable to connect to the dependency-check database; analysis has stopped"</span>);</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;207</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; LOGGER.log(Level.FINE, <span class="string">""</span>, ex);</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;208</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; } <span class="keyword">finally</span> {</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;209</td> <td class="nbHitsUncovered"><a title="Line 209: Conditional coverage 0% (0/2).">&nbsp;0</a></td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp;<a title="Line 209: Conditional coverage 0% (0/2)."> <span class="keyword">if</span> (engine != <span class="keyword">null</span>) {</a></span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;210</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; engine.cleanup();</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;211</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; }</pre></td></tr>
<tr> <td class="numLine">&nbsp;212</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; }</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;213</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; }</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;214</td> <td class="nbHits">&nbsp;</td>
<tr> <td class="numLineCover">&nbsp;111</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; }</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;112</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;</pre></td></tr>
<tr> <td class="numLine">&nbsp;215</td> <td class="nbHits">&nbsp;</td>
<tr> <td class="numLine">&nbsp;113</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; <span class="comment">/**</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;216</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> * Updates the global Settings.</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;217</td> <td class="nbHits">&nbsp;</td>
<tr> <td class="numLine">&nbsp;114</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> * Scans the specified directories and writes the dependency reports to the reportDirectory.</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;115</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> *</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;116</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> * @param reportDirectory the path to the directory where the reports will be written</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;117</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> * @param outputFormat the output format of the report</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;118</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> * @param applicationName the application name for the report</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;119</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> * @param files the files/directories to scan</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;120</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> * @param excludes the patterns for files/directories to exclude</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;121</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> *</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;122</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> * @throws InvalidScanPathException thrown if the path to scan starts with "//"</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;123</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> */</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;124</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; <span class="keyword">private</span> <span class="keyword">void</span> runScan(String reportDirectory, String outputFormat, String applicationName, String[] files,</pre></td></tr>
<tr> <td class="numLine">&nbsp;125</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; String[] excludes) <span class="keyword">throws</span> InvalidScanPathException {</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;126</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; Engine engine = <span class="keyword">null</span>;</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;127</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; <span class="keyword">try</span> {</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;128</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; engine = <span class="keyword">new</span> Engine();</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;129</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; List&lt;String&gt; antStylePaths = <span class="keyword">new</span> ArrayList&lt;String&gt;();</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;130</td> <td class="nbHitsUncovered"><a title="Line 130: Conditional coverage 0% (0/4) [each condition: 0%, 0%].">&nbsp;0</a></td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp;<a title="Line 130: Conditional coverage 0% (0/4) [each condition: 0%, 0%]."> <span class="keyword">if</span> (excludes == <span class="keyword">null</span> || excludes.length == 0) {</a></span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;131</td> <td class="nbHitsUncovered"><a title="Line 131: Conditional coverage 0% (0/2).">&nbsp;0</a></td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp;<a title="Line 131: Conditional coverage 0% (0/2)."> <span class="keyword">for</span> (String file : files) {</a></span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;132</td> <td class="nbHitsUncovered"><a title="Line 132: Conditional coverage 0% (0/4) [each condition: 0%, 0%].">&nbsp;0</a></td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp;<a title="Line 132: Conditional coverage 0% (0/4) [each condition: 0%, 0%]."> <span class="keyword">if</span> (file.contains(<span class="string">"*"</span>) || file.contains(<span class="string">"?"</span>)) {</a></span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;133</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; antStylePaths.add(file);</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;134</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; } <span class="keyword">else</span> {</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;135</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; engine.scan(file);</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;136</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; }</pre></td></tr>
<tr> <td class="numLine">&nbsp;137</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; }</pre></td></tr>
<tr> <td class="numLine">&nbsp;138</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; } <span class="keyword">else</span> {</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;139</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; antStylePaths = Arrays.asList(files);</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;140</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; }</pre></td></tr>
<tr> <td class="numLine">&nbsp;141</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;142</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; <span class="keyword">final</span> Set&lt;File&gt; paths = <span class="keyword">new</span> HashSet&lt;File&gt;();</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;143</td> <td class="nbHitsUncovered"><a title="Line 143: Conditional coverage 0% (0/2).">&nbsp;0</a></td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp;<a title="Line 143: Conditional coverage 0% (0/2)."> <span class="keyword">for</span> (String file : antStylePaths) {</a></span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;144</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; <span class="keyword">final</span> DirectoryScanner scanner = <span class="keyword">new</span> DirectoryScanner();</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;145</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; String include = file.replace(<span class="string">'\\'</span>, <span class="string">'/'</span>);</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;146</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; File baseDir;</pre></td></tr>
<tr> <td class="numLine">&nbsp;147</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;148</td> <td class="nbHitsUncovered"><a title="Line 148: Conditional coverage 0% (0/2).">&nbsp;0</a></td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp;<a title="Line 148: Conditional coverage 0% (0/2)."> <span class="keyword">if</span> (include.startsWith(<span class="string">"//"</span>)) {</a></span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;149</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; <span class="keyword">throw</span> <span class="keyword">new</span> InvalidScanPathException(<span class="string">"Unable to scan paths specified by //"</span>);</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;150</td> <td class="nbHitsUncovered"><a title="Line 150: Conditional coverage 0% (0/2).">&nbsp;0</a></td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp;<a title="Line 150: Conditional coverage 0% (0/2)."> } <span class="keyword">else</span> <span class="keyword">if</span> (include.startsWith(<span class="string">"./"</span>)) {</a></span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;151</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; baseDir = <span class="keyword">new</span> File(<span class="string">"."</span>);</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;152</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; include = include.substring(2);</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;153</td> <td class="nbHitsUncovered"><a title="Line 153: Conditional coverage 0% (0/2).">&nbsp;0</a></td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp;<a title="Line 153: Conditional coverage 0% (0/2)."> } <span class="keyword">else</span> <span class="keyword">if</span> (include.startsWith(<span class="string">"/"</span>)) {</a></span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;154</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; baseDir = <span class="keyword">new</span> File(<span class="string">"/"</span>);</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;155</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; include = include.substring(1);</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;156</td> <td class="nbHitsUncovered"><a title="Line 156: Conditional coverage 0% (0/2).">&nbsp;0</a></td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp;<a title="Line 156: Conditional coverage 0% (0/2)."> } <span class="keyword">else</span> <span class="keyword">if</span> (include.contains(<span class="string">"/"</span>)) {</a></span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;157</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; <span class="keyword">final</span> <span class="keyword">int</span> pos = include.indexOf(<span class="string">'/'</span>);</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;158</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; <span class="keyword">final</span> String tmp = include.substring(0, pos);</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;159</td> <td class="nbHitsUncovered"><a title="Line 159: Conditional coverage 0% (0/4) [each condition: 0%, 0%].">&nbsp;0</a></td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp;<a title="Line 159: Conditional coverage 0% (0/4) [each condition: 0%, 0%]."> <span class="keyword">if</span> (tmp.contains(<span class="string">"*"</span>) || tmp.contains(<span class="string">"?"</span>)) {</a></span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;160</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; baseDir = <span class="keyword">new</span> File(<span class="string">"."</span>);</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;161</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; } <span class="keyword">else</span> {</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;162</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; baseDir = <span class="keyword">new</span> File(tmp);</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;163</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; include = include.substring(pos + 1);</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;164</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; }</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;165</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; } <span class="keyword">else</span> { <span class="comment">//no path info - must just be a file in the working directory</span></span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;166</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; baseDir = <span class="keyword">new</span> File(<span class="string">"."</span>);</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;167</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; }</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;168</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; scanner.setBasedir(baseDir);</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;169</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; scanner.setIncludes(include);</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;170</td> <td class="nbHitsUncovered"><a title="Line 170: Conditional coverage 0% (0/4) [each condition: 0%, 0%].">&nbsp;0</a></td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp;<a title="Line 170: Conditional coverage 0% (0/4) [each condition: 0%, 0%]."> <span class="keyword">if</span> (excludes != <span class="keyword">null</span> &amp;&amp; excludes.length &gt; 0) {</a></span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;171</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; scanner.addExcludes(excludes);</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;172</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; }</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;173</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; scanner.scan();</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;174</td> <td class="nbHitsUncovered"><a title="Line 174: Conditional coverage 0% (0/2).">&nbsp;0</a></td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp;<a title="Line 174: Conditional coverage 0% (0/2)."> <span class="keyword">if</span> (scanner.getIncludedFilesCount() &gt; 0) {</a></span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;175</td> <td class="nbHitsUncovered"><a title="Line 175: Conditional coverage 0% (0/2).">&nbsp;0</a></td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp;<a title="Line 175: Conditional coverage 0% (0/2)."> <span class="keyword">for</span> (String s : scanner.getIncludedFiles()) {</a></span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;176</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; <span class="keyword">final</span> File f = <span class="keyword">new</span> File(baseDir, s);</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;177</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; paths.add(f);</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;178</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; }</pre></td></tr>
<tr> <td class="numLine">&nbsp;179</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; }</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;180</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; }</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;181</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; engine.scan(paths);</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;182</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;183</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; engine.analyzeDependencies();</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;184</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; <span class="keyword">final</span> List&lt;Dependency&gt; dependencies = engine.getDependencies();</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;185</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; DatabaseProperties prop = <span class="keyword">null</span>;</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;186</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; CveDB cve = <span class="keyword">null</span>;</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;187</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; <span class="keyword">try</span> {</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;188</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; cve = <span class="keyword">new</span> CveDB();</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;189</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; cve.open();</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;190</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; prop = cve.getDatabaseProperties();</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;191</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; } <span class="keyword">catch</span> (DatabaseException ex) {</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;192</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; LOGGER.log(Level.FINE, <span class="string">"Unable to retrieve DB Properties"</span>, ex);</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;193</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; } <span class="keyword">finally</span> {</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;194</td> <td class="nbHitsUncovered"><a title="Line 194: Conditional coverage 0% (0/2).">&nbsp;0</a></td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp;<a title="Line 194: Conditional coverage 0% (0/2)."> <span class="keyword">if</span> (cve != <span class="keyword">null</span>) {</a></span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;195</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; cve.close();</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;196</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; }</pre></td></tr>
<tr> <td class="numLine">&nbsp;197</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; }</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;198</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; <span class="keyword">final</span> ReportGenerator report = <span class="keyword">new</span> ReportGenerator(applicationName, dependencies, engine.getAnalyzers(), prop);</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;199</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; <span class="keyword">try</span> {</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;200</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; report.generateReports(reportDirectory, outputFormat);</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;201</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; } <span class="keyword">catch</span> (IOException ex) {</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;202</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; LOGGER.log(Level.SEVERE, <span class="string">"There was an IO error while attempting to generate the report."</span>);</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;203</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; LOGGER.log(Level.FINE, <span class="keyword">null</span>, ex);</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;204</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; } <span class="keyword">catch</span> (Throwable ex) {</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;205</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; LOGGER.log(Level.SEVERE, <span class="string">"There was an error while attempting to generate the report."</span>);</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;206</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; LOGGER.log(Level.FINE, <span class="keyword">null</span>, ex);</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;207</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; }</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;208</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; } <span class="keyword">catch</span> (DatabaseException ex) {</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;209</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; LOGGER.log(Level.SEVERE, <span class="string">"Unable to connect to the dependency-check database; analysis has stopped"</span>);</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;210</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; LOGGER.log(Level.FINE, <span class="string">""</span>, ex);</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;211</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; } <span class="keyword">finally</span> {</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;212</td> <td class="nbHitsUncovered"><a title="Line 212: Conditional coverage 0% (0/2).">&nbsp;0</a></td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp;<a title="Line 212: Conditional coverage 0% (0/2)."> <span class="keyword">if</span> (engine != <span class="keyword">null</span>) {</a></span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;213</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; engine.cleanup();</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;214</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; }</pre></td></tr>
<tr> <td class="numLine">&nbsp;215</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; }</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;216</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; }</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;217</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;</pre></td></tr>
<tr> <td class="numLine">&nbsp;218</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> * @param cli a reference to the CLI Parser that contains the command line arguments used to set the corresponding</span></pre></td></tr>
<td class="src"><pre class="src">&nbsp; <span class="comment">/**</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;219</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> * settings in the core engine.</span></pre></td></tr>
<td class="src"><pre class="src">&nbsp;<span class="comment"> * Only executes the update phase of dependency-check.</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;220</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> */</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;221</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; <span class="keyword">private</span> <span class="keyword">void</span> runUpdateOnly() {</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;222</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; Engine engine = <span class="keyword">null</span>;</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;223</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; <span class="keyword">try</span> {</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;224</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; engine = <span class="keyword">new</span> Engine();</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;225</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; engine.doUpdates();</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;226</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; } <span class="keyword">catch</span> (DatabaseException ex) {</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;227</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; LOGGER.log(Level.SEVERE, <span class="string">"Unable to connect to the dependency-check database; analysis has stopped"</span>);</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;228</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; LOGGER.log(Level.FINE, <span class="string">""</span>, ex);</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;229</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; } <span class="keyword">finally</span> {</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;230</td> <td class="nbHitsUncovered"><a title="Line 230: Conditional coverage 0% (0/2).">&nbsp;0</a></td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp;<a title="Line 230: Conditional coverage 0% (0/2)."> <span class="keyword">if</span> (engine != <span class="keyword">null</span>) {</a></span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;231</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; engine.cleanup();</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;232</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; }</pre></td></tr>
<tr> <td class="numLine">&nbsp;233</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; }</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;234</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; }</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;235</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;</pre></td></tr>
<tr> <td class="numLine">&nbsp;236</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; <span class="comment">/**</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;237</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> * Updates the global Settings.</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;238</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> *</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;239</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> * @param cli a reference to the CLI Parser that contains the command line arguments used to set the corresponding settings in</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;240</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> * the core engine.</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;241</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> */</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;242</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; <span class="keyword">private</span> <span class="keyword">void</span> populateSettings(CliParser cli) {</pre></td></tr>
<tr> <td class="numLine">&nbsp;222</td> <td class="nbHits">&nbsp;</td>
<tr> <td class="numLine">&nbsp;243</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;223</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; <span class="keyword">final</span> <span class="keyword">boolean</span> autoUpdate = cli.isAutoUpdate();</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;224</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; <span class="keyword">final</span> String connectionTimeout = cli.getConnectionTimeout();</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;225</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; <span class="keyword">final</span> String proxyServer = cli.getProxyServer();</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;226</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; <span class="keyword">final</span> String proxyPort = cli.getProxyPort();</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;227</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; <span class="keyword">final</span> String proxyUser = cli.getProxyUsername();</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;228</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; <span class="keyword">final</span> String proxyPass = cli.getProxyPassword();</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;229</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; <span class="keyword">final</span> String dataDirectory = cli.getDataDirectory();</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;230</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; <span class="keyword">final</span> File propertiesFile = cli.getPropertiesFile();</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;231</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; <span class="keyword">final</span> String suppressionFile = cli.getSuppressionFile();</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;232</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; <span class="keyword">final</span> <span class="keyword">boolean</span> jarDisabled = cli.isJarDisabled();</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;233</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; <span class="keyword">final</span> <span class="keyword">boolean</span> archiveDisabled = cli.isArchiveDisabled();</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;234</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; <span class="keyword">final</span> <span class="keyword">boolean</span> assemblyDisabled = cli.isAssemblyDisabled();</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;235</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; <span class="keyword">final</span> <span class="keyword">boolean</span> nuspecDisabled = cli.isNuspecDisabled();</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;236</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; <span class="keyword">final</span> <span class="keyword">boolean</span> centralDisabled = cli.isCentralDisabled();</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;237</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; <span class="keyword">final</span> <span class="keyword">boolean</span> nexusDisabled = cli.isNexusDisabled();</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;238</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; <span class="keyword">final</span> String nexusUrl = cli.getNexusUrl();</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;239</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; <span class="keyword">final</span> String databaseDriverName = cli.getDatabaseDriverName();</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;240</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; <span class="keyword">final</span> String databaseDriverPath = cli.getDatabaseDriverPath();</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;241</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; <span class="keyword">final</span> String connectionString = cli.getConnectionString();</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;242</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; <span class="keyword">final</span> String databaseUser = cli.getDatabaseUser();</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;243</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; <span class="keyword">final</span> String databasePassword = cli.getDatabasePassword();</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;244</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; <span class="keyword">final</span> String additionalZipExtensions = cli.getAdditionalZipExtensions();</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;245</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; <span class="keyword">final</span> String pathToMono = cli.getPathToMono();</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;246</td> <td class="nbHits">&nbsp;</td>
<tr> <td class="numLineCover">&nbsp;244</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; <span class="keyword">final</span> <span class="keyword">boolean</span> autoUpdate = cli.isAutoUpdate();</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;245</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; <span class="keyword">final</span> String connectionTimeout = cli.getConnectionTimeout();</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;246</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; <span class="keyword">final</span> String proxyServer = cli.getProxyServer();</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;247</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; <span class="keyword">final</span> String proxyPort = cli.getProxyPort();</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;248</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; <span class="keyword">final</span> String proxyUser = cli.getProxyUsername();</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;249</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; <span class="keyword">final</span> String proxyPass = cli.getProxyPassword();</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;250</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; <span class="keyword">final</span> String dataDirectory = cli.getDataDirectory();</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;251</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; <span class="keyword">final</span> File propertiesFile = cli.getPropertiesFile();</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;252</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; <span class="keyword">final</span> String suppressionFile = cli.getSuppressionFile();</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;253</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; <span class="keyword">final</span> <span class="keyword">boolean</span> jarDisabled = cli.isJarDisabled();</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;254</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; <span class="keyword">final</span> <span class="keyword">boolean</span> archiveDisabled = cli.isArchiveDisabled();</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;255</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; <span class="keyword">final</span> <span class="keyword">boolean</span> assemblyDisabled = cli.isAssemblyDisabled();</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;256</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; <span class="keyword">final</span> <span class="keyword">boolean</span> nuspecDisabled = cli.isNuspecDisabled();</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;257</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; <span class="keyword">final</span> <span class="keyword">boolean</span> centralDisabled = cli.isCentralDisabled();</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;258</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; <span class="keyword">final</span> <span class="keyword">boolean</span> nexusDisabled = cli.isNexusDisabled();</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;259</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; <span class="keyword">final</span> String nexusUrl = cli.getNexusUrl();</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;260</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; <span class="keyword">final</span> String databaseDriverName = cli.getDatabaseDriverName();</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;261</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; <span class="keyword">final</span> String databaseDriverPath = cli.getDatabaseDriverPath();</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;262</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; <span class="keyword">final</span> String connectionString = cli.getConnectionString();</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;263</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; <span class="keyword">final</span> String databaseUser = cli.getDatabaseUser();</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;264</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; <span class="keyword">final</span> String databasePassword = cli.getDatabasePassword();</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;265</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; <span class="keyword">final</span> String additionalZipExtensions = cli.getAdditionalZipExtensions();</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;266</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; <span class="keyword">final</span> String pathToMono = cli.getPathToMono();</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;267</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;247</td> <td class="nbHitsUncovered"><a title="Line 247: Conditional coverage 0% (0/2).">&nbsp;0</a></td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp;<a title="Line 247: Conditional coverage 0% (0/2)."> <span class="keyword">if</span> (propertiesFile != <span class="keyword">null</span>) {</a></span></pre></td></tr>
<tr> <td class="numLine">&nbsp;248</td> <td class="nbHits">&nbsp;</td>
<tr> <td class="numLineCover">&nbsp;268</td> <td class="nbHitsUncovered"><a title="Line 268: Conditional coverage 0% (0/2).">&nbsp;0</a></td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp;<a title="Line 268: Conditional coverage 0% (0/2)."> <span class="keyword">if</span> (propertiesFile != <span class="keyword">null</span>) {</a></span></pre></td></tr>
<tr> <td class="numLine">&nbsp;269</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; <span class="keyword">try</span> {</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;249</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; Settings.mergeProperties(propertiesFile);</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;250</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; } <span class="keyword">catch</span> (FileNotFoundException ex) {</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;251</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; <span class="keyword">final</span> String msg = String.format(<span class="string">"Unable to load properties file '%s'"</span>, propertiesFile.getPath());</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;252</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; LOGGER.log(Level.SEVERE, msg);</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;253</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; LOGGER.log(Level.FINE, <span class="keyword">null</span>, ex);</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;254</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; } <span class="keyword">catch</span> (IOException ex) {</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;255</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; <span class="keyword">final</span> String msg = String.format(<span class="string">"Unable to find properties file '%s'"</span>, propertiesFile.getPath());</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;256</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; LOGGER.log(Level.SEVERE, msg);</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;257</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; LOGGER.log(Level.FINE, <span class="keyword">null</span>, ex);</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;258</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; }</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;259</td> <td class="nbHits">&nbsp;</td>
<tr> <td class="numLineCover">&nbsp;270</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; Settings.mergeProperties(propertiesFile);</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;271</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; } <span class="keyword">catch</span> (FileNotFoundException ex) {</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;272</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; <span class="keyword">final</span> String msg = String.format(<span class="string">"Unable to load properties file '%s'"</span>, propertiesFile.getPath());</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;273</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; LOGGER.log(Level.SEVERE, msg);</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;274</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; LOGGER.log(Level.FINE, <span class="keyword">null</span>, ex);</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;275</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; } <span class="keyword">catch</span> (IOException ex) {</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;276</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; <span class="keyword">final</span> String msg = String.format(<span class="string">"Unable to find properties file '%s'"</span>, propertiesFile.getPath());</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;277</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; LOGGER.log(Level.SEVERE, msg);</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;278</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; LOGGER.log(Level.FINE, <span class="keyword">null</span>, ex);</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;279</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; }</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;280</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; }</pre></td></tr>
<tr> <td class="numLine">&nbsp;260</td> <td class="nbHits">&nbsp;</td>
<tr> <td class="numLine">&nbsp;281</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; <span class="comment">// We have to wait until we've merged the properties before attempting to set whether we use</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;261</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; <span class="comment">// the proxy for Nexus since it could be disabled in the properties, but not explicitly stated</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;262</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; <span class="comment">// on the command line</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;263</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; <span class="keyword">final</span> <span class="keyword">boolean</span> nexusUsesProxy = cli.isNexusUsesProxy();</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;264</td> <td class="nbHitsUncovered"><a title="Line 264: Conditional coverage 0% (0/2).">&nbsp;0</a></td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp;<a title="Line 264: Conditional coverage 0% (0/2)."> <span class="keyword">if</span> (dataDirectory != <span class="keyword">null</span>) {</a></span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;265</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; Settings.setString(Settings.KEYS.DATA_DIRECTORY, dataDirectory);</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;266</td> <td class="nbHitsUncovered"><a title="Line 266: Conditional coverage 0% (0/2).">&nbsp;0</a></td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp;<a title="Line 266: Conditional coverage 0% (0/2)."> } <span class="keyword">else</span> <span class="keyword">if</span> (System.getProperty(<span class="string">"basedir"</span>) != <span class="keyword">null</span>) {</a></span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;267</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; <span class="keyword">final</span> File dataDir = <span class="keyword">new</span> File(System.getProperty(<span class="string">"basedir"</span>), <span class="string">"data"</span>);</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;268</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; Settings.setString(Settings.KEYS.DATA_DIRECTORY, dataDir.getAbsolutePath());</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;269</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; } <span class="keyword">else</span> {</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;270</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; <span class="keyword">final</span> File jarPath = <span class="keyword">new</span> File(App.<span class="keyword">class</span>.getProtectionDomain().getCodeSource().getLocation().getPath());</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;271</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; <span class="keyword">final</span> File base = jarPath.getParentFile();</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;272</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; <span class="keyword">final</span> String sub = Settings.getString(Settings.KEYS.DATA_DIRECTORY);</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;273</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; <span class="keyword">final</span> File dataDir = <span class="keyword">new</span> File(base, sub);</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;274</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; Settings.setString(Settings.KEYS.DATA_DIRECTORY, dataDir.getAbsolutePath());</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;275</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; }</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;276</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; Settings.setBoolean(Settings.KEYS.AUTO_UPDATE, autoUpdate);</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;277</td> <td class="nbHitsUncovered"><a title="Line 277: Conditional coverage 0% (0/4) [each condition: 0%, 0%].">&nbsp;0</a></td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp;<a title="Line 277: Conditional coverage 0% (0/4) [each condition: 0%, 0%]."> <span class="keyword">if</span> (proxyServer != <span class="keyword">null</span> &amp;&amp; !proxyServer.isEmpty()) {</a></span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;278</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; Settings.setString(Settings.KEYS.PROXY_SERVER, proxyServer);</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;279</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; }</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;280</td> <td class="nbHitsUncovered"><a title="Line 280: Conditional coverage 0% (0/4) [each condition: 0%, 0%].">&nbsp;0</a></td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp;<a title="Line 280: Conditional coverage 0% (0/4) [each condition: 0%, 0%]."> <span class="keyword">if</span> (proxyPort != <span class="keyword">null</span> &amp;&amp; !proxyPort.isEmpty()) {</a></span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;281</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; Settings.setString(Settings.KEYS.PROXY_PORT, proxyPort);</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;282</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; }</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;283</td> <td class="nbHitsUncovered"><a title="Line 283: Conditional coverage 0% (0/4) [each condition: 0%, 0%].">&nbsp;0</a></td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp;<a title="Line 283: Conditional coverage 0% (0/4) [each condition: 0%, 0%]."> <span class="keyword">if</span> (proxyUser != <span class="keyword">null</span> &amp;&amp; !proxyUser.isEmpty()) {</a></span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;284</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; Settings.setString(Settings.KEYS.PROXY_USERNAME, proxyUser);</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;285</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; }</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;286</td> <td class="nbHitsUncovered"><a title="Line 286: Conditional coverage 0% (0/4) [each condition: 0%, 0%].">&nbsp;0</a></td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp;<a title="Line 286: Conditional coverage 0% (0/4) [each condition: 0%, 0%]."> <span class="keyword">if</span> (proxyPass != <span class="keyword">null</span> &amp;&amp; !proxyPass.isEmpty()) {</a></span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;287</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; Settings.setString(Settings.KEYS.PROXY_PASSWORD, proxyPass);</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;288</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; }</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;289</td> <td class="nbHitsUncovered"><a title="Line 289: Conditional coverage 0% (0/4) [each condition: 0%, 0%].">&nbsp;0</a></td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp;<a title="Line 289: Conditional coverage 0% (0/4) [each condition: 0%, 0%]."> <span class="keyword">if</span> (connectionTimeout != <span class="keyword">null</span> &amp;&amp; !connectionTimeout.isEmpty()) {</a></span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;290</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; Settings.setString(Settings.KEYS.CONNECTION_TIMEOUT, connectionTimeout);</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;291</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; }</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;292</td> <td class="nbHitsUncovered"><a title="Line 292: Conditional coverage 0% (0/4) [each condition: 0%, 0%].">&nbsp;0</a></td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp;<a title="Line 292: Conditional coverage 0% (0/4) [each condition: 0%, 0%]."> <span class="keyword">if</span> (suppressionFile != <span class="keyword">null</span> &amp;&amp; !suppressionFile.isEmpty()) {</a></span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;293</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; Settings.setString(Settings.KEYS.SUPPRESSION_FILE, suppressionFile);</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;294</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; }</pre></td></tr>
<tr> <td class="numLine">&nbsp;295</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;</pre></td></tr>
<td class="src"><pre class="src">&nbsp; <span class="comment">// the proxy for Nexus since it could be disabled in the properties, but not explicitly stated</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;283</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; <span class="comment">// on the command line</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;284</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; <span class="keyword">final</span> <span class="keyword">boolean</span> nexusUsesProxy = cli.isNexusUsesProxy();</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;285</td> <td class="nbHitsUncovered"><a title="Line 285: Conditional coverage 0% (0/2).">&nbsp;0</a></td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp;<a title="Line 285: Conditional coverage 0% (0/2)."> <span class="keyword">if</span> (dataDirectory != <span class="keyword">null</span>) {</a></span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;286</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; Settings.setString(Settings.KEYS.DATA_DIRECTORY, dataDirectory);</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;287</td> <td class="nbHitsUncovered"><a title="Line 287: Conditional coverage 0% (0/2).">&nbsp;0</a></td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp;<a title="Line 287: Conditional coverage 0% (0/2)."> } <span class="keyword">else</span> <span class="keyword">if</span> (System.getProperty(<span class="string">"basedir"</span>) != <span class="keyword">null</span>) {</a></span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;288</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; <span class="keyword">final</span> File dataDir = <span class="keyword">new</span> File(System.getProperty(<span class="string">"basedir"</span>), <span class="string">"data"</span>);</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;289</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; Settings.setString(Settings.KEYS.DATA_DIRECTORY, dataDir.getAbsolutePath());</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;290</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; } <span class="keyword">else</span> {</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;291</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; <span class="keyword">final</span> File jarPath = <span class="keyword">new</span> File(App.<span class="keyword">class</span>.getProtectionDomain().getCodeSource().getLocation().getPath());</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;292</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; <span class="keyword">final</span> File base = jarPath.getParentFile();</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;293</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; <span class="keyword">final</span> String sub = Settings.getString(Settings.KEYS.DATA_DIRECTORY);</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;294</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; <span class="keyword">final</span> File dataDir = <span class="keyword">new</span> File(base, sub);</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;295</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; Settings.setString(Settings.KEYS.DATA_DIRECTORY, dataDir.getAbsolutePath());</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;296</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; <span class="comment">//File Type Analyzer Settings</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;297</td> <td class="nbHitsUncovered"><a title="Line 297: Conditional coverage 0% (0/2).">&nbsp;0</a></td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp;<a title="Line 297: Conditional coverage 0% (0/2)."> Settings.setBoolean(Settings.KEYS.ANALYZER_JAR_ENABLED, !jarDisabled);</a></span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;298</td> <td class="nbHitsUncovered"><a title="Line 298: Conditional coverage 0% (0/2).">&nbsp;0</a></td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp;<a title="Line 298: Conditional coverage 0% (0/2)."> Settings.setBoolean(Settings.KEYS.ANALYZER_ARCHIVE_ENABLED, !archiveDisabled);</a></span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;299</td> <td class="nbHitsUncovered"><a title="Line 299: Conditional coverage 0% (0/2).">&nbsp;0</a></td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp;<a title="Line 299: Conditional coverage 0% (0/2)."> Settings.setBoolean(Settings.KEYS.ANALYZER_NUSPEC_ENABLED, !nuspecDisabled);</a></span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;300</td> <td class="nbHitsUncovered"><a title="Line 300: Conditional coverage 0% (0/2).">&nbsp;0</a></td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp;<a title="Line 300: Conditional coverage 0% (0/2)."> Settings.setBoolean(Settings.KEYS.ANALYZER_ASSEMBLY_ENABLED, !assemblyDisabled);</a></span></pre></td></tr>
<tr> <td class="numLine">&nbsp;301</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;302</td> <td class="nbHitsUncovered"><a title="Line 302: Conditional coverage 0% (0/2).">&nbsp;0</a></td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp;<a title="Line 302: Conditional coverage 0% (0/2)."> Settings.setBoolean(Settings.KEYS.ANALYZER_CENTRAL_ENABLED, !centralDisabled);</a></span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;303</td> <td class="nbHitsUncovered"><a title="Line 303: Conditional coverage 0% (0/2).">&nbsp;0</a></td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp;<a title="Line 303: Conditional coverage 0% (0/2)."> Settings.setBoolean(Settings.KEYS.ANALYZER_NEXUS_ENABLED, !nexusDisabled);</a></span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;304</td> <td class="nbHitsUncovered"><a title="Line 304: Conditional coverage 0% (0/4) [each condition: 0%, 0%].">&nbsp;0</a></td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp;<a title="Line 304: Conditional coverage 0% (0/4) [each condition: 0%, 0%]."> <span class="keyword">if</span> (nexusUrl != <span class="keyword">null</span> &amp;&amp; !nexusUrl.isEmpty()) {</a></span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;305</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; Settings.setString(Settings.KEYS.ANALYZER_NEXUS_URL, nexusUrl);</span></pre></td></tr>
<td class="src"><pre class="src">&nbsp; }</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;297</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; Settings.setBoolean(Settings.KEYS.AUTO_UPDATE, autoUpdate);</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;298</td> <td class="nbHitsUncovered"><a title="Line 298: Conditional coverage 0% (0/4) [each condition: 0%, 0%].">&nbsp;0</a></td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp;<a title="Line 298: Conditional coverage 0% (0/4) [each condition: 0%, 0%]."> <span class="keyword">if</span> (proxyServer != <span class="keyword">null</span> &amp;&amp; !proxyServer.isEmpty()) {</a></span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;299</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; Settings.setString(Settings.KEYS.PROXY_SERVER, proxyServer);</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;300</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; }</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;301</td> <td class="nbHitsUncovered"><a title="Line 301: Conditional coverage 0% (0/4) [each condition: 0%, 0%].">&nbsp;0</a></td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp;<a title="Line 301: Conditional coverage 0% (0/4) [each condition: 0%, 0%]."> <span class="keyword">if</span> (proxyPort != <span class="keyword">null</span> &amp;&amp; !proxyPort.isEmpty()) {</a></span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;302</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; Settings.setString(Settings.KEYS.PROXY_PORT, proxyPort);</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;303</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; }</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;304</td> <td class="nbHitsUncovered"><a title="Line 304: Conditional coverage 0% (0/4) [each condition: 0%, 0%].">&nbsp;0</a></td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp;<a title="Line 304: Conditional coverage 0% (0/4) [each condition: 0%, 0%]."> <span class="keyword">if</span> (proxyUser != <span class="keyword">null</span> &amp;&amp; !proxyUser.isEmpty()) {</a></span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;305</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; Settings.setString(Settings.KEYS.PROXY_USERNAME, proxyUser);</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;306</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; }</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;307</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; Settings.setBoolean(Settings.KEYS.ANALYZER_NEXUS_PROXY, nexusUsesProxy);</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;308</td> <td class="nbHitsUncovered"><a title="Line 308: Conditional coverage 0% (0/4) [each condition: 0%, 0%].">&nbsp;0</a></td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp;<a title="Line 308: Conditional coverage 0% (0/4) [each condition: 0%, 0%]."> <span class="keyword">if</span> (databaseDriverName != <span class="keyword">null</span> &amp;&amp; !databaseDriverName.isEmpty()) {</a></span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;309</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; Settings.setString(Settings.KEYS.DB_DRIVER_NAME, databaseDriverName);</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;310</td> <td class="nbHits">&nbsp;</td>
<tr> <td class="numLineCover">&nbsp;307</td> <td class="nbHitsUncovered"><a title="Line 307: Conditional coverage 0% (0/4) [each condition: 0%, 0%].">&nbsp;0</a></td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp;<a title="Line 307: Conditional coverage 0% (0/4) [each condition: 0%, 0%]."> <span class="keyword">if</span> (proxyPass != <span class="keyword">null</span> &amp;&amp; !proxyPass.isEmpty()) {</a></span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;308</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; Settings.setString(Settings.KEYS.PROXY_PASSWORD, proxyPass);</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;309</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; }</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;311</td> <td class="nbHitsUncovered"><a title="Line 311: Conditional coverage 0% (0/4) [each condition: 0%, 0%].">&nbsp;0</a></td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp;<a title="Line 311: Conditional coverage 0% (0/4) [each condition: 0%, 0%]."> <span class="keyword">if</span> (databaseDriverPath != <span class="keyword">null</span> &amp;&amp; !databaseDriverPath.isEmpty()) {</a></span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;312</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; Settings.setString(Settings.KEYS.DB_DRIVER_PATH, databaseDriverPath);</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;313</td> <td class="nbHits">&nbsp;</td>
<tr> <td class="numLineCover">&nbsp;310</td> <td class="nbHitsUncovered"><a title="Line 310: Conditional coverage 0% (0/4) [each condition: 0%, 0%].">&nbsp;0</a></td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp;<a title="Line 310: Conditional coverage 0% (0/4) [each condition: 0%, 0%]."> <span class="keyword">if</span> (connectionTimeout != <span class="keyword">null</span> &amp;&amp; !connectionTimeout.isEmpty()) {</a></span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;311</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; Settings.setString(Settings.KEYS.CONNECTION_TIMEOUT, connectionTimeout);</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;312</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; }</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;313</td> <td class="nbHitsUncovered"><a title="Line 313: Conditional coverage 0% (0/4) [each condition: 0%, 0%].">&nbsp;0</a></td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp;<a title="Line 313: Conditional coverage 0% (0/4) [each condition: 0%, 0%]."> <span class="keyword">if</span> (suppressionFile != <span class="keyword">null</span> &amp;&amp; !suppressionFile.isEmpty()) {</a></span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;314</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; Settings.setString(Settings.KEYS.SUPPRESSION_FILE, suppressionFile);</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;315</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; }</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;314</td> <td class="nbHitsUncovered"><a title="Line 314: Conditional coverage 0% (0/4) [each condition: 0%, 0%].">&nbsp;0</a></td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp;<a title="Line 314: Conditional coverage 0% (0/4) [each condition: 0%, 0%]."> <span class="keyword">if</span> (connectionString != <span class="keyword">null</span> &amp;&amp; !connectionString.isEmpty()) {</a></span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;315</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; Settings.setString(Settings.KEYS.DB_CONNECTION_STRING, connectionString);</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;316</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; }</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;317</td> <td class="nbHitsUncovered"><a title="Line 317: Conditional coverage 0% (0/4) [each condition: 0%, 0%].">&nbsp;0</a></td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp;<a title="Line 317: Conditional coverage 0% (0/4) [each condition: 0%, 0%]."> <span class="keyword">if</span> (databaseUser != <span class="keyword">null</span> &amp;&amp; !databaseUser.isEmpty()) {</a></span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;318</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; Settings.setString(Settings.KEYS.DB_USER, databaseUser);</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;319</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; }</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;320</td> <td class="nbHitsUncovered"><a title="Line 320: Conditional coverage 0% (0/4) [each condition: 0%, 0%].">&nbsp;0</a></td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp;<a title="Line 320: Conditional coverage 0% (0/4) [each condition: 0%, 0%]."> <span class="keyword">if</span> (databasePassword != <span class="keyword">null</span> &amp;&amp; !databasePassword.isEmpty()) {</a></span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;321</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; Settings.setString(Settings.KEYS.DB_PASSWORD, databasePassword);</span></pre></td></tr>
<td class="src"><pre class="src">&nbsp;</pre></td></tr>
<tr> <td class="numLine">&nbsp;317</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; <span class="comment">//File Type Analyzer Settings</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;318</td> <td class="nbHitsUncovered"><a title="Line 318: Conditional coverage 0% (0/2).">&nbsp;0</a></td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp;<a title="Line 318: Conditional coverage 0% (0/2)."> Settings.setBoolean(Settings.KEYS.ANALYZER_JAR_ENABLED, !jarDisabled);</a></span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;319</td> <td class="nbHitsUncovered"><a title="Line 319: Conditional coverage 0% (0/2).">&nbsp;0</a></td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp;<a title="Line 319: Conditional coverage 0% (0/2)."> Settings.setBoolean(Settings.KEYS.ANALYZER_ARCHIVE_ENABLED, !archiveDisabled);</a></span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;320</td> <td class="nbHitsUncovered"><a title="Line 320: Conditional coverage 0% (0/2).">&nbsp;0</a></td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp;<a title="Line 320: Conditional coverage 0% (0/2)."> Settings.setBoolean(Settings.KEYS.ANALYZER_NUSPEC_ENABLED, !nuspecDisabled);</a></span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;321</td> <td class="nbHitsUncovered"><a title="Line 321: Conditional coverage 0% (0/2).">&nbsp;0</a></td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp;<a title="Line 321: Conditional coverage 0% (0/2)."> Settings.setBoolean(Settings.KEYS.ANALYZER_ASSEMBLY_ENABLED, !assemblyDisabled);</a></span></pre></td></tr>
<tr> <td class="numLine">&nbsp;322</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;323</td> <td class="nbHitsUncovered"><a title="Line 323: Conditional coverage 0% (0/2).">&nbsp;0</a></td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp;<a title="Line 323: Conditional coverage 0% (0/2)."> Settings.setBoolean(Settings.KEYS.ANALYZER_CENTRAL_ENABLED, !centralDisabled);</a></span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;324</td> <td class="nbHitsUncovered"><a title="Line 324: Conditional coverage 0% (0/2).">&nbsp;0</a></td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp;<a title="Line 324: Conditional coverage 0% (0/2)."> Settings.setBoolean(Settings.KEYS.ANALYZER_NEXUS_ENABLED, !nexusDisabled);</a></span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;325</td> <td class="nbHitsUncovered"><a title="Line 325: Conditional coverage 0% (0/4) [each condition: 0%, 0%].">&nbsp;0</a></td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp;<a title="Line 325: Conditional coverage 0% (0/4) [each condition: 0%, 0%]."> <span class="keyword">if</span> (nexusUrl != <span class="keyword">null</span> &amp;&amp; !nexusUrl.isEmpty()) {</a></span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;326</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; Settings.setString(Settings.KEYS.ANALYZER_NEXUS_URL, nexusUrl);</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;327</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; }</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;323</td> <td class="nbHitsUncovered"><a title="Line 323: Conditional coverage 0% (0/4) [each condition: 0%, 0%].">&nbsp;0</a></td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp;<a title="Line 323: Conditional coverage 0% (0/4) [each condition: 0%, 0%]."> <span class="keyword">if</span> (additionalZipExtensions != <span class="keyword">null</span> &amp;&amp; !additionalZipExtensions.isEmpty()) {</a></span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;324</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; Settings.setString(Settings.KEYS.ADDITIONAL_ZIP_EXTENSIONS, additionalZipExtensions);</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;325</td> <td class="nbHits">&nbsp;</td>
<tr> <td class="numLineCover">&nbsp;328</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; Settings.setBoolean(Settings.KEYS.ANALYZER_NEXUS_PROXY, nexusUsesProxy);</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;329</td> <td class="nbHitsUncovered"><a title="Line 329: Conditional coverage 0% (0/4) [each condition: 0%, 0%].">&nbsp;0</a></td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp;<a title="Line 329: Conditional coverage 0% (0/4) [each condition: 0%, 0%]."> <span class="keyword">if</span> (databaseDriverName != <span class="keyword">null</span> &amp;&amp; !databaseDriverName.isEmpty()) {</a></span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;330</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; Settings.setString(Settings.KEYS.DB_DRIVER_NAME, databaseDriverName);</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;331</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; }</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;326</td> <td class="nbHitsUncovered"><a title="Line 326: Conditional coverage 0% (0/4) [each condition: 0%, 0%].">&nbsp;0</a></td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp;<a title="Line 326: Conditional coverage 0% (0/4) [each condition: 0%, 0%]."> <span class="keyword">if</span> (pathToMono != <span class="keyword">null</span> &amp;&amp; !pathToMono.isEmpty()) {</a></span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;327</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; Settings.setString(Settings.KEYS.ANALYZER_ASSEMBLY_MONO_PATH, pathToMono);</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;328</td> <td class="nbHits">&nbsp;</td>
<tr> <td class="numLineCover">&nbsp;332</td> <td class="nbHitsUncovered"><a title="Line 332: Conditional coverage 0% (0/4) [each condition: 0%, 0%].">&nbsp;0</a></td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp;<a title="Line 332: Conditional coverage 0% (0/4) [each condition: 0%, 0%]."> <span class="keyword">if</span> (databaseDriverPath != <span class="keyword">null</span> &amp;&amp; !databaseDriverPath.isEmpty()) {</a></span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;333</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; Settings.setString(Settings.KEYS.DB_DRIVER_PATH, databaseDriverPath);</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;334</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; }</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;329</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; }</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;330</td> <td class="nbHits">&nbsp;</td>
<tr> <td class="numLineCover">&nbsp;335</td> <td class="nbHitsUncovered"><a title="Line 335: Conditional coverage 0% (0/4) [each condition: 0%, 0%].">&nbsp;0</a></td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp;<a title="Line 335: Conditional coverage 0% (0/4) [each condition: 0%, 0%]."> <span class="keyword">if</span> (connectionString != <span class="keyword">null</span> &amp;&amp; !connectionString.isEmpty()) {</a></span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;336</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; Settings.setString(Settings.KEYS.DB_CONNECTION_STRING, connectionString);</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;337</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; }</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;338</td> <td class="nbHitsUncovered"><a title="Line 338: Conditional coverage 0% (0/4) [each condition: 0%, 0%].">&nbsp;0</a></td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp;<a title="Line 338: Conditional coverage 0% (0/4) [each condition: 0%, 0%]."> <span class="keyword">if</span> (databaseUser != <span class="keyword">null</span> &amp;&amp; !databaseUser.isEmpty()) {</a></span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;339</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; Settings.setString(Settings.KEYS.DB_USER, databaseUser);</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;340</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; }</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;341</td> <td class="nbHitsUncovered"><a title="Line 341: Conditional coverage 0% (0/4) [each condition: 0%, 0%].">&nbsp;0</a></td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp;<a title="Line 341: Conditional coverage 0% (0/4) [each condition: 0%, 0%]."> <span class="keyword">if</span> (databasePassword != <span class="keyword">null</span> &amp;&amp; !databasePassword.isEmpty()) {</a></span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;342</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; Settings.setString(Settings.KEYS.DB_PASSWORD, databasePassword);</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;343</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; }</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;344</td> <td class="nbHitsUncovered"><a title="Line 344: Conditional coverage 0% (0/4) [each condition: 0%, 0%].">&nbsp;0</a></td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp;<a title="Line 344: Conditional coverage 0% (0/4) [each condition: 0%, 0%]."> <span class="keyword">if</span> (additionalZipExtensions != <span class="keyword">null</span> &amp;&amp; !additionalZipExtensions.isEmpty()) {</a></span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;345</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; Settings.setString(Settings.KEYS.ADDITIONAL_ZIP_EXTENSIONS, additionalZipExtensions);</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;346</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; }</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;347</td> <td class="nbHitsUncovered"><a title="Line 347: Conditional coverage 0% (0/4) [each condition: 0%, 0%].">&nbsp;0</a></td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp;<a title="Line 347: Conditional coverage 0% (0/4) [each condition: 0%, 0%]."> <span class="keyword">if</span> (pathToMono != <span class="keyword">null</span> &amp;&amp; !pathToMono.isEmpty()) {</a></span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;348</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; Settings.setString(Settings.KEYS.ANALYZER_ASSEMBLY_MONO_PATH, pathToMono);</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;349</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; }</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;350</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; }</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;351</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;}</pre></td></tr>
</table>
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