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Jeremy Long
2016-06-16 19:24:14 -04:00
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commit 427a7b4ec8
1209 changed files with 57762 additions and 51538 deletions
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dependency-check-core/cobertura/org.owasp.dependencycheck.analyzer.ArchiveAnalyzer.html
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@@ -12,7 +12,7 @@
<div class="separator">&nbsp;</div>
<table class="report">
<thead><tr> <td class="heading">Classes in this File</td> <td class="heading"><a class="dfn" href="help.html" onclick="popupwindow('help.html'); return false;">Line Coverage</a></td> <td class="heading"><a class="dfn" href="help.html" onclick="popupwindow('help.html'); return false;">Branch Coverage</a></td> <td class="heading"><a class="dfn" href="help.html" onclick="popupwindow('help.html'); return false;">Complexity</a></td></tr></thead>
<tr><td><a href="org.owasp.dependencycheck.analyzer.ArchiveAnalyzer.html">ArchiveAnalyzer</a></td><td><table cellpadding="0px" cellspacing="0px" class="percentgraph"><tr class="percentgraph"><td align="right" class="percentgraph" width="40">36%</td><td class="percentgraph"><div class="percentgraph"><div class="greenbar" style="width:36px"><span class="text">73/200</span></div></div></td></tr></table></td><td><table cellpadding="0px" cellspacing="0px" class="percentgraph"><tr class="percentgraph"><td align="right" class="percentgraph" width="40">24%</td><td class="percentgraph"><div class="percentgraph"><div class="greenbar" style="width:24px"><span class="text">22/90</span></div></div></td></tr></table></td><td class="value"><span class="hidden">5.1875;</span>5.188</td></tr>
<tr><td><a href="org.owasp.dependencycheck.analyzer.ArchiveAnalyzer.html">ArchiveAnalyzer</a></td><td><table cellpadding="0px" cellspacing="0px" class="percentgraph"><tr class="percentgraph"><td align="right" class="percentgraph" width="40">36%</td><td class="percentgraph"><div class="percentgraph"><div class="greenbar" style="width:36px"><span class="text">73/200</span></div></div></td></tr></table></td><td><table cellpadding="0px" cellspacing="0px" class="percentgraph"><tr class="percentgraph"><td align="right" class="percentgraph" width="40">25%</td><td class="percentgraph"><div class="percentgraph"><div class="greenbar" style="width:25px"><span class="text">23/90</span></div></div></td></tr></table></td><td class="value"><span class="hidden">5.1875;</span>5.188</td></tr>
</table>
<div class="separator">&nbsp;</div>
@@ -147,7 +147,7 @@
<td class="src"><pre class="src">&nbsp;<span class="comment"> * @author Jeremy Long</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;65</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> */</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;66</td> <td class="nbHitsCovered">&nbsp;4</td> <td class="src"><pre class="src">&nbsp;<span class="keyword">public</span> <span class="keyword">class</span> ArchiveAnalyzer <span class="keyword">extends</span> AbstractFileTypeAnalyzer {</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;66</td> <td class="nbHitsCovered">&nbsp;12</td> <td class="src"><pre class="src">&nbsp;<span class="keyword">public</span> <span class="keyword">class</span> ArchiveAnalyzer <span class="keyword">extends</span> AbstractFileTypeAnalyzer {</pre></td></tr>
<tr> <td class="numLine">&nbsp;67</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;</pre></td></tr>
<tr> <td class="numLine">&nbsp;68</td> <td class="nbHits">&nbsp;</td>
@@ -156,35 +156,35 @@
<td class="src"><pre class="src">&nbsp;<span class="comment"> * The logger.</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;70</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> */</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;71</td> <td class="nbHitsCovered">&nbsp;1</td> <td class="src"><pre class="src">&nbsp; <span class="keyword">private</span> <span class="keyword">static</span> <span class="keyword">final</span> Logger LOGGER = LoggerFactory.getLogger(ArchiveAnalyzer.<span class="keyword">class</span>);</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;71</td> <td class="nbHitsCovered">&nbsp;2</td> <td class="src"><pre class="src">&nbsp; <span class="keyword">private</span> <span class="keyword">static</span> <span class="keyword">final</span> Logger LOGGER = LoggerFactory.getLogger(ArchiveAnalyzer.<span class="keyword">class</span>);</pre></td></tr>
<tr> <td class="numLine">&nbsp;72</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; <span class="comment">/**</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;73</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> * The count of directories created during analysis. This is used for creating temporary directories.</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;74</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> */</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;75</td> <td class="nbHitsCovered">&nbsp;1</td> <td class="src"><pre class="src">&nbsp; <span class="keyword">private</span> <span class="keyword">static</span> <span class="keyword">int</span> dirCount = 0;</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;75</td> <td class="nbHitsCovered">&nbsp;2</td> <td class="src"><pre class="src">&nbsp; <span class="keyword">private</span> <span class="keyword">static</span> <span class="keyword">int</span> dirCount = 0;</pre></td></tr>
<tr> <td class="numLine">&nbsp;76</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; <span class="comment">/**</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;77</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> * The parent directory for the individual directories per archive.</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;78</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> */</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;79</td> <td class="nbHitsCovered">&nbsp;4</td> <td class="src"><pre class="src">&nbsp; <span class="keyword">private</span> File tempFileLocation = <span class="keyword">null</span>;</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;79</td> <td class="nbHitsCovered">&nbsp;12</td> <td class="src"><pre class="src">&nbsp; <span class="keyword">private</span> File tempFileLocation = <span class="keyword">null</span>;</pre></td></tr>
<tr> <td class="numLine">&nbsp;80</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; <span class="comment">/**</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;81</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> * The max scan depth that the analyzer will recursively extract nested archives.</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;82</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> */</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;83</td> <td class="nbHitsCovered">&nbsp;1</td> <td class="src"><pre class="src">&nbsp; <span class="keyword">private</span> <span class="keyword">static</span> <span class="keyword">final</span> <span class="keyword">int</span> MAX_SCAN_DEPTH = Settings.getInt(<span class="string">"archive.scan.depth"</span>, 3);</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;83</td> <td class="nbHitsCovered">&nbsp;2</td> <td class="src"><pre class="src">&nbsp; <span class="keyword">private</span> <span class="keyword">static</span> <span class="keyword">final</span> <span class="keyword">int</span> MAX_SCAN_DEPTH = Settings.getInt(<span class="string">"archive.scan.depth"</span>, 3);</pre></td></tr>
<tr> <td class="numLine">&nbsp;84</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; <span class="comment">/**</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;85</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> * Tracks the current scan/extraction depth for nested archives.</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;86</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> */</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;87</td> <td class="nbHitsCovered">&nbsp;4</td> <td class="src"><pre class="src">&nbsp; <span class="keyword">private</span> <span class="keyword">int</span> scanDepth = 0;</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;87</td> <td class="nbHitsCovered">&nbsp;12</td> <td class="src"><pre class="src">&nbsp; <span class="keyword">private</span> <span class="keyword">int</span> scanDepth = 0;</pre></td></tr>
<tr> <td class="numLine">&nbsp;88</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;</pre></td></tr>
<tr> <td class="numLine">&nbsp;89</td> <td class="nbHits">&nbsp;</td>
@@ -203,14 +203,14 @@
<td class="src"><pre class="src">&nbsp;<span class="comment"> * The phase that this analyzer is intended to run in.</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;96</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> */</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;97</td> <td class="nbHitsCovered">&nbsp;1</td> <td class="src"><pre class="src">&nbsp; <span class="keyword">private</span> <span class="keyword">static</span> <span class="keyword">final</span> AnalysisPhase ANALYSIS_PHASE = AnalysisPhase.INITIAL;</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;97</td> <td class="nbHitsCovered">&nbsp;2</td> <td class="src"><pre class="src">&nbsp; <span class="keyword">private</span> <span class="keyword">static</span> <span class="keyword">final</span> AnalysisPhase ANALYSIS_PHASE = AnalysisPhase.INITIAL;</pre></td></tr>
<tr> <td class="numLine">&nbsp;98</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; <span class="comment">/**</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;99</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> * The set of things we can handle with Zip methods</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;100</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> */</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;101</td> <td class="nbHitsCovered">&nbsp;1</td> <td class="src"><pre class="src">&nbsp; <span class="keyword">private</span> <span class="keyword">static</span> <span class="keyword">final</span> Set&lt;String&gt; ZIPPABLES = newHashSet(<span class="string">"zip"</span>, <span class="string">"ear"</span>, <span class="string">"war"</span>, <span class="string">"jar"</span>, <span class="string">"sar"</span>, <span class="string">"apk"</span>, <span class="string">"nupkg"</span>);</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;101</td> <td class="nbHitsCovered">&nbsp;2</td> <td class="src"><pre class="src">&nbsp; <span class="keyword">private</span> <span class="keyword">static</span> <span class="keyword">final</span> Set&lt;String&gt; ZIPPABLES = newHashSet(<span class="string">"zip"</span>, <span class="string">"ear"</span>, <span class="string">"war"</span>, <span class="string">"jar"</span>, <span class="string">"sar"</span>, <span class="string">"apk"</span>, <span class="string">"nupkg"</span>);</pre></td></tr>
<tr> <td class="numLine">&nbsp;102</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; <span class="comment">/**</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;103</td> <td class="nbHits">&nbsp;</td>
@@ -219,7 +219,7 @@
<td class="src"><pre class="src">&nbsp;<span class="comment"> * explicitly handled in {@link #extractFiles(File, File, Engine)}.</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;105</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> */</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;106</td> <td class="nbHitsCovered">&nbsp;1</td> <td class="src"><pre class="src">&nbsp; <span class="keyword">private</span> <span class="keyword">static</span> <span class="keyword">final</span> Set&lt;String&gt; EXTENSIONS = newHashSet(<span class="string">"tar"</span>, <span class="string">"gz"</span>, <span class="string">"tgz"</span>, <span class="string">"bz2"</span>, <span class="string">"tbz2"</span>);</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;106</td> <td class="nbHitsCovered">&nbsp;2</td> <td class="src"><pre class="src">&nbsp; <span class="keyword">private</span> <span class="keyword">static</span> <span class="keyword">final</span> Set&lt;String&gt; EXTENSIONS = newHashSet(<span class="string">"tar"</span>, <span class="string">"gz"</span>, <span class="string">"tgz"</span>, <span class="string">"bz2"</span>, <span class="string">"tbz2"</span>);</pre></td></tr>
<tr> <td class="numLine">&nbsp;107</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;</pre></td></tr>
<tr> <td class="numLine">&nbsp;108</td> <td class="nbHits">&nbsp;</td>
@@ -228,19 +228,19 @@
<td class="src"><pre class="src">&nbsp;<span class="comment"> * Detects files with extensions to remove from the engine's collection of dependencies.</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;110</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> */</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;111</td> <td class="nbHitsCovered">&nbsp;1</td> <td class="src"><pre class="src">&nbsp; <span class="keyword">private</span> <span class="keyword">static</span> <span class="keyword">final</span> FileFilter REMOVE_FROM_ANALYSIS = FileFilterBuilder.newInstance().addExtensions(<span class="string">"zip"</span>, <span class="string">"tar"</span>, <span class="string">"gz"</span>, <span class="string">"tgz"</span>, <span class="string">"bz2"</span>, <span class="string">"tbz2"</span>)</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;112</td> <td class="nbHitsCovered">&nbsp;1</td> <td class="src"><pre class="src">&nbsp; .build();</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;111</td> <td class="nbHitsCovered">&nbsp;2</td> <td class="src"><pre class="src">&nbsp; <span class="keyword">private</span> <span class="keyword">static</span> <span class="keyword">final</span> FileFilter REMOVE_FROM_ANALYSIS = FileFilterBuilder.newInstance().addExtensions(<span class="string">"zip"</span>, <span class="string">"tar"</span>, <span class="string">"gz"</span>, <span class="string">"tgz"</span>, <span class="string">"bz2"</span>, <span class="string">"tbz2"</span>)</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;112</td> <td class="nbHitsCovered">&nbsp;2</td> <td class="src"><pre class="src">&nbsp; .build();</pre></td></tr>
<tr> <td class="numLine">&nbsp;113</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;</pre></td></tr>
<tr> <td class="numLine">&nbsp;114</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; <span class="keyword">static</span> {</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;115</td> <td class="nbHitsCovered">&nbsp;1</td> <td class="src"><pre class="src">&nbsp; <span class="keyword">final</span> String additionalZipExt = Settings.getString(Settings.KEYS.ADDITIONAL_ZIP_EXTENSIONS);</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;116</td> <td class="nbHitsCovered">&nbsp;1</td> <td class="src"><pre class="src">&nbsp; <span class="keyword">if</span> (additionalZipExt != <span class="keyword">null</span>) {</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;115</td> <td class="nbHitsCovered">&nbsp;2</td> <td class="src"><pre class="src">&nbsp; <span class="keyword">final</span> String additionalZipExt = Settings.getString(Settings.KEYS.ADDITIONAL_ZIP_EXTENSIONS);</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;116</td> <td class="nbHitsCovered">&nbsp;2</td> <td class="src"><pre class="src">&nbsp; <span class="keyword">if</span> (additionalZipExt != <span class="keyword">null</span>) {</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;117</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; <span class="keyword">final</span> String[] ext = additionalZipExt.split(<span class="string">"\\s*,\\s*"</span>);</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;118</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; Collections.addAll(ZIPPABLES, ext);</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;119</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; }</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;120</td> <td class="nbHitsCovered">&nbsp;1</td> <td class="src"><pre class="src">&nbsp; EXTENSIONS.addAll(ZIPPABLES);</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;120</td> <td class="nbHitsCovered">&nbsp;2</td> <td class="src"><pre class="src">&nbsp; EXTENSIONS.addAll(ZIPPABLES);</pre></td></tr>
<tr> <td class="numLine">&nbsp;121</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; }</pre></td></tr>
<tr> <td class="numLine">&nbsp;122</td> <td class="nbHits">&nbsp;</td>
@@ -251,14 +251,14 @@
<td class="src"><pre class="src">&nbsp;<span class="comment"> * The file filter used to filter supported files.</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;125</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> */</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;126</td> <td class="nbHitsCovered">&nbsp;1</td> <td class="src"><pre class="src">&nbsp; <span class="keyword">private</span> <span class="keyword">static</span> <span class="keyword">final</span> FileFilter FILTER = FileFilterBuilder.newInstance().addExtensions(EXTENSIONS).build();</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;126</td> <td class="nbHitsCovered">&nbsp;2</td> <td class="src"><pre class="src">&nbsp; <span class="keyword">private</span> <span class="keyword">static</span> <span class="keyword">final</span> FileFilter FILTER = FileFilterBuilder.newInstance().addExtensions(EXTENSIONS).build();</pre></td></tr>
<tr> <td class="numLine">&nbsp;127</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;</pre></td></tr>
<tr> <td class="numLine">&nbsp;128</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; @Override</pre></td></tr>
<tr> <td class="numLine">&nbsp;129</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; <span class="keyword">protected</span> FileFilter getFileFilter() {</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;130</td> <td class="nbHitsCovered">&nbsp;853</td> <td class="src"><pre class="src">&nbsp; <span class="keyword">return</span> FILTER;</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;130</td> <td class="nbHitsCovered">&nbsp;1718</td> <td class="src"><pre class="src">&nbsp; <span class="keyword">return</span> FILTER;</pre></td></tr>
<tr> <td class="numLine">&nbsp;131</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; }</pre></td></tr>
<tr> <td class="numLine">&nbsp;132</td> <td class="nbHits">&nbsp;</td>
@@ -269,7 +269,7 @@
<td class="src"><pre class="src">&nbsp;<span class="comment"> * Detects files with .zip extension.</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;135</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> */</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;136</td> <td class="nbHitsCovered">&nbsp;1</td> <td class="src"><pre class="src">&nbsp; <span class="keyword">private</span> <span class="keyword">static</span> <span class="keyword">final</span> FileFilter ZIP_FILTER = FileFilterBuilder.newInstance().addExtensions(<span class="string">"zip"</span>).build();</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;136</td> <td class="nbHitsCovered">&nbsp;2</td> <td class="src"><pre class="src">&nbsp; <span class="keyword">private</span> <span class="keyword">static</span> <span class="keyword">final</span> FileFilter ZIP_FILTER = FileFilterBuilder.newInstance().addExtensions(<span class="string">"zip"</span>).build();</pre></td></tr>
<tr> <td class="numLine">&nbsp;137</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;</pre></td></tr>
<tr> <td class="numLine">&nbsp;138</td> <td class="nbHits">&nbsp;</td>
@@ -286,7 +286,7 @@
<td class="src"><pre class="src">&nbsp; @Override</pre></td></tr>
<tr> <td class="numLine">&nbsp;144</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; <span class="keyword">public</span> String getName() {</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;145</td> <td class="nbHitsCovered">&nbsp;4</td> <td class="src"><pre class="src">&nbsp; <span class="keyword">return</span> ANALYZER_NAME;</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;145</td> <td class="nbHitsCovered">&nbsp;32</td> <td class="src"><pre class="src">&nbsp; <span class="keyword">return</span> ANALYZER_NAME;</pre></td></tr>
<tr> <td class="numLine">&nbsp;146</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; }</pre></td></tr>
<tr> <td class="numLine">&nbsp;147</td> <td class="nbHits">&nbsp;</td>
@@ -305,7 +305,7 @@
<td class="src"><pre class="src">&nbsp; @Override</pre></td></tr>
<tr> <td class="numLine">&nbsp;154</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; <span class="keyword">public</span> AnalysisPhase getAnalysisPhase() {</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;155</td> <td class="nbHitsCovered">&nbsp;3</td> <td class="src"><pre class="src">&nbsp; <span class="keyword">return</span> ANALYSIS_PHASE;</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;155</td> <td class="nbHitsCovered">&nbsp;8</td> <td class="src"><pre class="src">&nbsp; <span class="keyword">return</span> ANALYSIS_PHASE;</pre></td></tr>
<tr> <td class="numLine">&nbsp;156</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; }</pre></td></tr>
<tr> <td class="numLine">&nbsp;157</td> <td class="nbHits">&nbsp;</td>
@@ -326,7 +326,7 @@
<td class="src"><pre class="src">&nbsp; @Override</pre></td></tr>
<tr> <td class="numLine">&nbsp;165</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; <span class="keyword">protected</span> String getAnalyzerEnabledSettingKey() {</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;166</td> <td class="nbHitsCovered">&nbsp;4</td> <td class="src"><pre class="src">&nbsp; <span class="keyword">return</span> Settings.KEYS.ANALYZER_ARCHIVE_ENABLED;</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;166</td> <td class="nbHitsCovered">&nbsp;12</td> <td class="src"><pre class="src">&nbsp; <span class="keyword">return</span> Settings.KEYS.ANALYZER_ARCHIVE_ENABLED;</pre></td></tr>
<tr> <td class="numLine">&nbsp;167</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; }</pre></td></tr>
<tr> <td class="numLine">&nbsp;168</td> <td class="nbHits">&nbsp;</td>
@@ -345,19 +345,19 @@
<td class="src"><pre class="src">&nbsp; @Override</pre></td></tr>
<tr> <td class="numLine">&nbsp;175</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; <span class="keyword">public</span> <span class="keyword">void</span> initializeFileTypeAnalyzer() <span class="keyword">throws</span> Exception {</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;176</td> <td class="nbHitsCovered">&nbsp;1</td> <td class="src"><pre class="src">&nbsp; <span class="keyword">final</span> File baseDir = Settings.getTempDirectory();</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;177</td> <td class="nbHitsCovered">&nbsp;1</td> <td class="src"><pre class="src">&nbsp; tempFileLocation = File.createTempFile(<span class="string">"check"</span>, <span class="string">"tmp"</span>, baseDir);</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;178</td> <td class="nbHitsUncovered"><a title="Line 178: Conditional coverage 50% (1/2).">&nbsp;1</a></td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp;<a title="Line 178: Conditional coverage 50% (1/2)."> <span class="keyword">if</span> (!tempFileLocation.delete()) {</a></span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;176</td> <td class="nbHitsCovered">&nbsp;2</td> <td class="src"><pre class="src">&nbsp; <span class="keyword">final</span> File baseDir = Settings.getTempDirectory();</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;177</td> <td class="nbHitsCovered">&nbsp;2</td> <td class="src"><pre class="src">&nbsp; tempFileLocation = File.createTempFile(<span class="string">"check"</span>, <span class="string">"tmp"</span>, baseDir);</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;178</td> <td class="nbHitsUncovered"><a title="Line 178: Conditional coverage 50% (1/2).">&nbsp;2</a></td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp;<a title="Line 178: Conditional coverage 50% (1/2)."> <span class="keyword">if</span> (!tempFileLocation.delete()) {</a></span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;179</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; <span class="keyword">final</span> String msg = String.format(<span class="string">"Unable to delete temporary file '%s'."</span>, tempFileLocation.getAbsolutePath());</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;180</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; <span class="keyword">throw</span> <span class="keyword">new</span> AnalysisException(msg);</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;181</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; }</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;182</td> <td class="nbHitsUncovered"><a title="Line 182: Conditional coverage 50% (1/2).">&nbsp;1</a></td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp;<a title="Line 182: Conditional coverage 50% (1/2)."> <span class="keyword">if</span> (!tempFileLocation.mkdirs()) {</a></span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;182</td> <td class="nbHitsUncovered"><a title="Line 182: Conditional coverage 50% (1/2).">&nbsp;2</a></td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp;<a title="Line 182: Conditional coverage 50% (1/2)."> <span class="keyword">if</span> (!tempFileLocation.mkdirs()) {</a></span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;183</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; <span class="keyword">final</span> String msg = String.format(<span class="string">"Unable to create directory '%s'."</span>, tempFileLocation.getAbsolutePath());</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;184</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; <span class="keyword">throw</span> <span class="keyword">new</span> AnalysisException(msg);</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;185</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; }</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;186</td> <td class="nbHitsCovered">&nbsp;1</td> <td class="src"><pre class="src">&nbsp; }</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;186</td> <td class="nbHitsCovered">&nbsp;2</td> <td class="src"><pre class="src">&nbsp; }</pre></td></tr>
<tr> <td class="numLine">&nbsp;187</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;</pre></td></tr>
<tr> <td class="numLine">&nbsp;188</td> <td class="nbHits">&nbsp;</td>
@@ -374,10 +374,10 @@
<td class="src"><pre class="src">&nbsp; @Override</pre></td></tr>
<tr> <td class="numLine">&nbsp;194</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; <span class="keyword">public</span> <span class="keyword">void</span> close() <span class="keyword">throws</span> Exception {</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;195</td> <td class="nbHitsUncovered"><a title="Line 195: Conditional coverage 50% (2/4) [each condition: 50%, 50%].">&nbsp;1</a></td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp;<a title="Line 195: Conditional coverage 50% (2/4) [each condition: 50%, 50%]."> <span class="keyword">if</span> (tempFileLocation != <span class="keyword">null</span> &amp;&amp; tempFileLocation.exists()) {</a></span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;196</td> <td class="nbHitsCovered">&nbsp;1</td> <td class="src"><pre class="src">&nbsp; LOGGER.debug(<span class="string">"Attempting to delete temporary files"</span>);</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;197</td> <td class="nbHitsCovered">&nbsp;1</td> <td class="src"><pre class="src">&nbsp; <span class="keyword">final</span> <span class="keyword">boolean</span> success = FileUtils.delete(tempFileLocation);</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;198</td> <td class="nbHitsUncovered"><a title="Line 198: Conditional coverage 25% (1/4) [each condition: 50%, 0%].">&nbsp;1</a></td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp;<a title="Line 198: Conditional coverage 25% (1/4) [each condition: 50%, 0%]."> <span class="keyword">if</span> (!success &amp;&amp; tempFileLocation.exists()) {</a></span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;195</td> <td class="nbHitsUncovered"><a title="Line 195: Conditional coverage 75% (3/4) [each condition: 100%, 50%].">&nbsp;4</a></td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp;<a title="Line 195: Conditional coverage 75% (3/4) [each condition: 100%, 50%]."> <span class="keyword">if</span> (tempFileLocation != <span class="keyword">null</span> &amp;&amp; tempFileLocation.exists()) {</a></span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;196</td> <td class="nbHitsCovered">&nbsp;2</td> <td class="src"><pre class="src">&nbsp; LOGGER.debug(<span class="string">"Attempting to delete temporary files"</span>);</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;197</td> <td class="nbHitsCovered">&nbsp;2</td> <td class="src"><pre class="src">&nbsp; <span class="keyword">final</span> <span class="keyword">boolean</span> success = FileUtils.delete(tempFileLocation);</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;198</td> <td class="nbHitsUncovered"><a title="Line 198: Conditional coverage 25% (1/4) [each condition: 50%, 0%].">&nbsp;2</a></td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp;<a title="Line 198: Conditional coverage 25% (1/4) [each condition: 50%, 0%]."> <span class="keyword">if</span> (!success &amp;&amp; tempFileLocation.exists()) {</a></span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;199</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; <span class="keyword">final</span> String[] l = tempFileLocation.list();</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;200</td> <td class="nbHitsUncovered"><a title="Line 200: Conditional coverage 0% (0/4) [each condition: 0%, 0%].">&nbsp;0</a></td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp;<a title="Line 200: Conditional coverage 0% (0/4) [each condition: 0%, 0%]."> <span class="keyword">if</span> (l != <span class="keyword">null</span> &amp;&amp; l.length &gt; 0) {</a></span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;201</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; LOGGER.warn(<span class="string">"Failed to delete some temporary files, see the log for more details"</span>);</span></pre></td></tr>
@@ -387,7 +387,7 @@
<td class="src"><pre class="src">&nbsp; }</pre></td></tr>
<tr> <td class="numLine">&nbsp;204</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; }</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;205</td> <td class="nbHitsCovered">&nbsp;1</td> <td class="src"><pre class="src">&nbsp; }</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;205</td> <td class="nbHitsCovered">&nbsp;4</td> <td class="src"><pre class="src">&nbsp; }</pre></td></tr>
<tr> <td class="numLine">&nbsp;206</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;</pre></td></tr>
<tr> <td class="numLine">&nbsp;207</td> <td class="nbHits">&nbsp;</td>
@@ -410,15 +410,15 @@
<td class="src"><pre class="src">&nbsp; @Override</pre></td></tr>
<tr> <td class="numLine">&nbsp;216</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; <span class="keyword">public</span> <span class="keyword">void</span> analyzeFileType(Dependency dependency, Engine engine) <span class="keyword">throws</span> AnalysisException {</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;217</td> <td class="nbHitsCovered">&nbsp;2</td> <td class="src"><pre class="src">&nbsp; <span class="keyword">final</span> File f = <span class="keyword">new</span> File(dependency.getActualFilePath());</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;218</td> <td class="nbHitsCovered">&nbsp;2</td> <td class="src"><pre class="src">&nbsp; <span class="keyword">final</span> File tmpDir = getNextTempDirectory();</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;219</td> <td class="nbHitsCovered">&nbsp;2</td> <td class="src"><pre class="src">&nbsp; extractFiles(f, tmpDir, engine);</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;217</td> <td class="nbHitsCovered">&nbsp;4</td> <td class="src"><pre class="src">&nbsp; <span class="keyword">final</span> File f = <span class="keyword">new</span> File(dependency.getActualFilePath());</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;218</td> <td class="nbHitsCovered">&nbsp;4</td> <td class="src"><pre class="src">&nbsp; <span class="keyword">final</span> File tmpDir = getNextTempDirectory();</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;219</td> <td class="nbHitsCovered">&nbsp;4</td> <td class="src"><pre class="src">&nbsp; extractFiles(f, tmpDir, engine);</pre></td></tr>
<tr> <td class="numLine">&nbsp;220</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;</pre></td></tr>
<tr> <td class="numLine">&nbsp;221</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; <span class="comment">//make a copy</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;222</td> <td class="nbHitsCovered">&nbsp;2</td> <td class="src"><pre class="src">&nbsp; <span class="keyword">final</span> Set&lt;Dependency&gt; dependencySet = findMoreDependencies(engine, tmpDir);</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;223</td> <td class="nbHitsUncovered"><a title="Line 223: Conditional coverage 50% (1/2).">&nbsp;2</a></td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp;<a title="Line 223: Conditional coverage 50% (1/2)."> <span class="keyword">if</span> (!dependencySet.isEmpty()) {</a></span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;222</td> <td class="nbHitsCovered">&nbsp;4</td> <td class="src"><pre class="src">&nbsp; <span class="keyword">final</span> Set&lt;Dependency&gt; dependencySet = findMoreDependencies(engine, tmpDir);</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;223</td> <td class="nbHitsUncovered"><a title="Line 223: Conditional coverage 50% (1/2).">&nbsp;4</a></td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp;<a title="Line 223: Conditional coverage 50% (1/2)."> <span class="keyword">if</span> (!dependencySet.isEmpty()) {</a></span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;224</td> <td class="nbHitsUncovered"><a title="Line 224: Conditional coverage 0% (0/2).">&nbsp;0</a></td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp;<a title="Line 224: Conditional coverage 0% (0/2)."> <span class="keyword">for</span> (Dependency d : dependencySet) {</a></span></pre></td></tr>
<tr> <td class="numLine">&nbsp;225</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; <span class="comment">//fix the dependency's display name and path</span></pre></td></tr>
@@ -445,13 +445,13 @@
<tr> <td class="numLineCover">&nbsp;242</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; }</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;243</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; }</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;244</td> <td class="nbHitsUncovered"><a title="Line 244: Conditional coverage 50% (1/2).">&nbsp;2</a></td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp;<a title="Line 244: Conditional coverage 50% (1/2)."> <span class="keyword">if</span> (REMOVE_FROM_ANALYSIS.accept(dependency.getActualFile())) {</a></span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;244</td> <td class="nbHitsUncovered"><a title="Line 244: Conditional coverage 50% (1/2).">&nbsp;4</a></td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp;<a title="Line 244: Conditional coverage 50% (1/2)."> <span class="keyword">if</span> (REMOVE_FROM_ANALYSIS.accept(dependency.getActualFile())) {</a></span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;245</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; addDisguisedJarsToDependencies(dependency, engine);</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;246</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; engine.getDependencies().remove(dependency);</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;247</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; }</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;248</td> <td class="nbHitsCovered">&nbsp;2</td> <td class="src"><pre class="src">&nbsp; Collections.sort(engine.getDependencies());</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;249</td> <td class="nbHitsCovered">&nbsp;2</td> <td class="src"><pre class="src">&nbsp; }</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;248</td> <td class="nbHitsCovered">&nbsp;4</td> <td class="src"><pre class="src">&nbsp; Collections.sort(engine.getDependencies());</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;249</td> <td class="nbHitsCovered">&nbsp;4</td> <td class="src"><pre class="src">&nbsp; }</pre></td></tr>
<tr> <td class="numLine">&nbsp;250</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;</pre></td></tr>
<tr> <td class="numLine">&nbsp;251</td> <td class="nbHits">&nbsp;</td>
@@ -508,7 +508,7 @@
<td class="src"><pre class="src">&nbsp;<span class="comment"> * An empty dependency set.</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;286</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;<span class="comment"> */</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;287</td> <td class="nbHitsCovered">&nbsp;1</td> <td class="src"><pre class="src">&nbsp; <span class="keyword">private</span> <span class="keyword">static</span> <span class="keyword">final</span> Set&lt;Dependency&gt; EMPTY_DEPENDENCY_SET = Collections.emptySet();</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;287</td> <td class="nbHitsCovered">&nbsp;2</td> <td class="src"><pre class="src">&nbsp; <span class="keyword">private</span> <span class="keyword">static</span> <span class="keyword">final</span> Set&lt;Dependency&gt; EMPTY_DEPENDENCY_SET = Collections.emptySet();</pre></td></tr>
<tr> <td class="numLine">&nbsp;288</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;</pre></td></tr>
<tr> <td class="numLine">&nbsp;289</td> <td class="nbHits">&nbsp;</td>
@@ -527,23 +527,23 @@
<td class="src"><pre class="src">&nbsp;<span class="comment"> */</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;296</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; <span class="keyword">private</span> <span class="keyword">static</span> Set&lt;Dependency&gt; findMoreDependencies(Engine engine, File file) {</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;297</td> <td class="nbHitsCovered">&nbsp;2</td> <td class="src"><pre class="src">&nbsp; <span class="keyword">final</span> List&lt;Dependency&gt; before = <span class="keyword">new</span> ArrayList&lt;Dependency&gt;(engine.getDependencies());</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;298</td> <td class="nbHitsCovered">&nbsp;2</td> <td class="src"><pre class="src">&nbsp; engine.scan(file);</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;299</td> <td class="nbHitsCovered">&nbsp;2</td> <td class="src"><pre class="src">&nbsp; <span class="keyword">final</span> List&lt;Dependency&gt; after = engine.getDependencies();</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;300</td> <td class="nbHitsUncovered"><a title="Line 300: Conditional coverage 50% (1/2).">&nbsp;2</a></td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp;<a title="Line 300: Conditional coverage 50% (1/2)."> <span class="keyword">final</span> <span class="keyword">boolean</span> sizeChanged = before.size() != after.size();</a></span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;297</td> <td class="nbHitsCovered">&nbsp;4</td> <td class="src"><pre class="src">&nbsp; <span class="keyword">final</span> List&lt;Dependency&gt; before = <span class="keyword">new</span> ArrayList&lt;Dependency&gt;(engine.getDependencies());</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;298</td> <td class="nbHitsCovered">&nbsp;4</td> <td class="src"><pre class="src">&nbsp; engine.scan(file);</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;299</td> <td class="nbHitsCovered">&nbsp;4</td> <td class="src"><pre class="src">&nbsp; <span class="keyword">final</span> List&lt;Dependency&gt; after = engine.getDependencies();</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;300</td> <td class="nbHitsUncovered"><a title="Line 300: Conditional coverage 50% (1/2).">&nbsp;4</a></td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp;<a title="Line 300: Conditional coverage 50% (1/2)."> <span class="keyword">final</span> <span class="keyword">boolean</span> sizeChanged = before.size() != after.size();</a></span></pre></td></tr>
<tr> <td class="numLine">&nbsp;301</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; <span class="keyword">final</span> Set&lt;Dependency&gt; newDependencies;</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;302</td> <td class="nbHitsUncovered"><a title="Line 302: Conditional coverage 50% (1/2).">&nbsp;2</a></td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp;<a title="Line 302: Conditional coverage 50% (1/2)."> <span class="keyword">if</span> (sizeChanged) {</a></span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;302</td> <td class="nbHitsUncovered"><a title="Line 302: Conditional coverage 50% (1/2).">&nbsp;4</a></td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp;<a title="Line 302: Conditional coverage 50% (1/2)."> <span class="keyword">if</span> (sizeChanged) {</a></span></pre></td></tr>
<tr> <td class="numLine">&nbsp;303</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; <span class="comment">//get the new dependencies</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;304</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; newDependencies = <span class="keyword">new</span> HashSet&lt;Dependency&gt;(after);</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;305</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; newDependencies.removeAll(before);</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;306</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; } <span class="keyword">else</span> {</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;307</td> <td class="nbHitsCovered">&nbsp;2</td> <td class="src"><pre class="src">&nbsp; newDependencies = EMPTY_DEPENDENCY_SET;</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;307</td> <td class="nbHitsCovered">&nbsp;4</td> <td class="src"><pre class="src">&nbsp; newDependencies = EMPTY_DEPENDENCY_SET;</pre></td></tr>
<tr> <td class="numLine">&nbsp;308</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; }</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;309</td> <td class="nbHitsCovered">&nbsp;2</td> <td class="src"><pre class="src">&nbsp; <span class="keyword">return</span> newDependencies;</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;309</td> <td class="nbHitsCovered">&nbsp;4</td> <td class="src"><pre class="src">&nbsp; <span class="keyword">return</span> newDependencies;</pre></td></tr>
<tr> <td class="numLine">&nbsp;310</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; }</pre></td></tr>
<tr> <td class="numLine">&nbsp;311</td> <td class="nbHits">&nbsp;</td>
@@ -562,20 +562,20 @@
<td class="src"><pre class="src">&nbsp;<span class="comment"> */</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;318</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; <span class="keyword">private</span> File getNextTempDirectory() <span class="keyword">throws</span> AnalysisException {</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;319</td> <td class="nbHitsCovered">&nbsp;2</td> <td class="src"><pre class="src">&nbsp; dirCount += 1;</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;320</td> <td class="nbHitsCovered">&nbsp;2</td> <td class="src"><pre class="src">&nbsp; <span class="keyword">final</span> File directory = <span class="keyword">new</span> File(tempFileLocation, String.valueOf(dirCount));</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;319</td> <td class="nbHitsCovered">&nbsp;4</td> <td class="src"><pre class="src">&nbsp; dirCount += 1;</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;320</td> <td class="nbHitsCovered">&nbsp;4</td> <td class="src"><pre class="src">&nbsp; <span class="keyword">final</span> File directory = <span class="keyword">new</span> File(tempFileLocation, String.valueOf(dirCount));</pre></td></tr>
<tr> <td class="numLine">&nbsp;321</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; <span class="comment">//getting an exception for some directories not being able to be created; might be because the directory already exists?</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;322</td> <td class="nbHitsUncovered"><a title="Line 322: Conditional coverage 50% (1/2).">&nbsp;2</a></td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp;<a title="Line 322: Conditional coverage 50% (1/2)."> <span class="keyword">if</span> (directory.exists()) {</a></span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;322</td> <td class="nbHitsUncovered"><a title="Line 322: Conditional coverage 50% (1/2).">&nbsp;4</a></td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp;<a title="Line 322: Conditional coverage 50% (1/2)."> <span class="keyword">if</span> (directory.exists()) {</a></span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;323</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; <span class="keyword">return</span> getNextTempDirectory();</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;324</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; }</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;325</td> <td class="nbHitsUncovered"><a title="Line 325: Conditional coverage 50% (1/2).">&nbsp;2</a></td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp;<a title="Line 325: Conditional coverage 50% (1/2)."> <span class="keyword">if</span> (!directory.mkdirs()) {</a></span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;325</td> <td class="nbHitsUncovered"><a title="Line 325: Conditional coverage 50% (1/2).">&nbsp;4</a></td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp;<a title="Line 325: Conditional coverage 50% (1/2)."> <span class="keyword">if</span> (!directory.mkdirs()) {</a></span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;326</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; <span class="keyword">final</span> String msg = String.format(<span class="string">"Unable to create temp directory '%s'."</span>, directory.getAbsolutePath());</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;327</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; <span class="keyword">throw</span> <span class="keyword">new</span> AnalysisException(msg);</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;328</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; }</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;329</td> <td class="nbHitsCovered">&nbsp;2</td> <td class="src"><pre class="src">&nbsp; <span class="keyword">return</span> directory;</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;329</td> <td class="nbHitsCovered">&nbsp;4</td> <td class="src"><pre class="src">&nbsp; <span class="keyword">return</span> directory;</pre></td></tr>
<tr> <td class="numLine">&nbsp;330</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; }</pre></td></tr>
<tr> <td class="numLine">&nbsp;331</td> <td class="nbHits">&nbsp;</td>
@@ -598,21 +598,21 @@
<td class="src"><pre class="src">&nbsp;<span class="comment"> */</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;340</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; <span class="keyword">private</span> <span class="keyword">void</span> extractFiles(File archive, File destination, Engine engine) <span class="keyword">throws</span> AnalysisException {</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;341</td> <td class="nbHitsUncovered"><a title="Line 341: Conditional coverage 50% (2/4) [each condition: 50%, 50%].">&nbsp;2</a></td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp;<a title="Line 341: Conditional coverage 50% (2/4) [each condition: 50%, 50%]."> <span class="keyword">if</span> (archive != <span class="keyword">null</span> &amp;&amp; destination != <span class="keyword">null</span>) {</a></span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;341</td> <td class="nbHitsUncovered"><a title="Line 341: Conditional coverage 50% (2/4) [each condition: 50%, 50%].">&nbsp;4</a></td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp;<a title="Line 341: Conditional coverage 50% (2/4) [each condition: 50%, 50%]."> <span class="keyword">if</span> (archive != <span class="keyword">null</span> &amp;&amp; destination != <span class="keyword">null</span>) {</a></span></pre></td></tr>
<tr> <td class="numLine">&nbsp;342</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; FileInputStream fis;</pre></td></tr>
<tr> <td class="numLine">&nbsp;343</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; <span class="keyword">try</span> {</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;344</td> <td class="nbHitsCovered">&nbsp;2</td> <td class="src"><pre class="src">&nbsp; fis = <span class="keyword">new</span> FileInputStream(archive);</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;344</td> <td class="nbHitsCovered">&nbsp;4</td> <td class="src"><pre class="src">&nbsp; fis = <span class="keyword">new</span> FileInputStream(archive);</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;345</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; } <span class="keyword">catch</span> (FileNotFoundException ex) {</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;346</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; LOGGER.debug(<span class="string">""</span>, ex);</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;347</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; <span class="keyword">throw</span> <span class="keyword">new</span> AnalysisException(<span class="string">"Archive file was not found."</span>, ex);</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;348</td> <td class="nbHitsCovered">&nbsp;2</td> <td class="src"><pre class="src">&nbsp; }</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;349</td> <td class="nbHitsCovered">&nbsp;2</td> <td class="src"><pre class="src">&nbsp; <span class="keyword">final</span> String archiveExt = FileUtils.getFileExtension(archive.getName()).toLowerCase();</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;348</td> <td class="nbHitsCovered">&nbsp;4</td> <td class="src"><pre class="src">&nbsp; }</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;349</td> <td class="nbHitsCovered">&nbsp;4</td> <td class="src"><pre class="src">&nbsp; <span class="keyword">final</span> String archiveExt = FileUtils.getFileExtension(archive.getName()).toLowerCase();</pre></td></tr>
<tr> <td class="numLine">&nbsp;350</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; <span class="keyword">try</span> {</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;351</td> <td class="nbHitsUncovered"><a title="Line 351: Conditional coverage 50% (1/2).">&nbsp;2</a></td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp;<a title="Line 351: Conditional coverage 50% (1/2)."> <span class="keyword">if</span> (ZIPPABLES.contains(archiveExt)) {</a></span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;352</td> <td class="nbHitsCovered">&nbsp;2</td> <td class="src"><pre class="src">&nbsp; extractArchive(<span class="keyword">new</span> ZipArchiveInputStream(<span class="keyword">new</span> BufferedInputStream(fis)), destination, engine);</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;351</td> <td class="nbHitsUncovered"><a title="Line 351: Conditional coverage 50% (1/2).">&nbsp;4</a></td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp;<a title="Line 351: Conditional coverage 50% (1/2)."> <span class="keyword">if</span> (ZIPPABLES.contains(archiveExt)) {</a></span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;352</td> <td class="nbHitsCovered">&nbsp;4</td> <td class="src"><pre class="src">&nbsp; extractArchive(<span class="keyword">new</span> ZipArchiveInputStream(<span class="keyword">new</span> BufferedInputStream(fis)), destination, engine);</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;353</td> <td class="nbHitsUncovered"><a title="Line 353: Conditional coverage 0% (0/2).">&nbsp;0</a></td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp;<a title="Line 353: Conditional coverage 0% (0/2)."> } <span class="keyword">else</span> <span class="keyword">if</span> (<span class="string">"tar"</span>.equals(archiveExt)) {</a></span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;354</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; extractArchive(<span class="keyword">new</span> TarArchiveInputStream(<span class="keyword">new</span> BufferedInputStream(fis)), destination, engine);</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;355</td> <td class="nbHitsUncovered"><a title="Line 355: Conditional coverage 0% (0/4) [each condition: 0%, 0%].">&nbsp;0</a></td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp;<a title="Line 355: Conditional coverage 0% (0/4) [each condition: 0%, 0%]."> } <span class="keyword">else</span> <span class="keyword">if</span> (<span class="string">"gz"</span>.equals(archiveExt) || <span class="string">"tgz"</span>.equals(archiveExt)) {</a></span></pre></td></tr>
@@ -639,11 +639,11 @@
<tr> <td class="numLineCover">&nbsp;373</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; LOGGER.debug(<span class="string">""</span>, ex);</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;374</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; } <span class="keyword">finally</span> {</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;375</td> <td class="nbHitsCovered">&nbsp;2</td> <td class="src"><pre class="src">&nbsp; close(fis);</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;376</td> <td class="nbHitsCovered">&nbsp;2</td> <td class="src"><pre class="src">&nbsp; }</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;375</td> <td class="nbHitsCovered">&nbsp;4</td> <td class="src"><pre class="src">&nbsp; close(fis);</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;376</td> <td class="nbHitsCovered">&nbsp;4</td> <td class="src"><pre class="src">&nbsp; }</pre></td></tr>
<tr> <td class="numLine">&nbsp;377</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; }</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;378</td> <td class="nbHitsCovered">&nbsp;2</td> <td class="src"><pre class="src">&nbsp; }</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;378</td> <td class="nbHitsCovered">&nbsp;4</td> <td class="src"><pre class="src">&nbsp; }</pre></td></tr>
<tr> <td class="numLine">&nbsp;379</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;</pre></td></tr>
<tr> <td class="numLine">&nbsp;380</td> <td class="nbHits">&nbsp;</td>
@@ -668,26 +668,26 @@
<td class="src"><pre class="src">&nbsp; ArchiveEntry entry;</pre></td></tr>
<tr> <td class="numLine">&nbsp;390</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; <span class="keyword">try</span> {</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;391</td> <td class="nbHitsCovered"><a title="Line 391: Conditional coverage 100% (2/2).">&nbsp;887</a></td> <td class="src"><pre class="src">&nbsp;<a title="Line 391: Conditional coverage 100% (2/2)."> <span class="keyword">while</span> ((entry = input.getNextEntry()) != <span class="keyword">null</span>) {</a></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;392</td> <td class="nbHitsCovered">&nbsp;885</td> <td class="src"><pre class="src">&nbsp; <span class="keyword">final</span> File file = <span class="keyword">new</span> File(destination, entry.getName());</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;393</td> <td class="nbHitsCovered"><a title="Line 393: Conditional coverage 100% (2/2).">&nbsp;885</a></td> <td class="src"><pre class="src">&nbsp;<a title="Line 393: Conditional coverage 100% (2/2)."> <span class="keyword">if</span> (entry.isDirectory()) {</a></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;394</td> <td class="nbHitsUncovered"><a title="Line 394: Conditional coverage 50% (2/4) [each condition: 50%, 50%].">&nbsp;36</a></td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp;<a title="Line 394: Conditional coverage 50% (2/4) [each condition: 50%, 50%]."> <span class="keyword">if</span> (!file.exists() &amp;&amp; !file.mkdirs()) {</a></span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;391</td> <td class="nbHitsCovered"><a title="Line 391: Conditional coverage 100% (2/2).">&nbsp;1774</a></td> <td class="src"><pre class="src">&nbsp;<a title="Line 391: Conditional coverage 100% (2/2)."> <span class="keyword">while</span> ((entry = input.getNextEntry()) != <span class="keyword">null</span>) {</a></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;392</td> <td class="nbHitsCovered">&nbsp;1770</td> <td class="src"><pre class="src">&nbsp; <span class="keyword">final</span> File file = <span class="keyword">new</span> File(destination, entry.getName());</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;393</td> <td class="nbHitsCovered"><a title="Line 393: Conditional coverage 100% (2/2).">&nbsp;1770</a></td> <td class="src"><pre class="src">&nbsp;<a title="Line 393: Conditional coverage 100% (2/2)."> <span class="keyword">if</span> (entry.isDirectory()) {</a></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;394</td> <td class="nbHitsUncovered"><a title="Line 394: Conditional coverage 50% (2/4) [each condition: 50%, 50%].">&nbsp;72</a></td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp;<a title="Line 394: Conditional coverage 50% (2/4) [each condition: 50%, 50%]."> <span class="keyword">if</span> (!file.exists() &amp;&amp; !file.mkdirs()) {</a></span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;395</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; <span class="keyword">final</span> String msg = String.format(<span class="string">"Unable to create directory '%s'."</span>, file.getAbsolutePath());</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;396</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; <span class="keyword">throw</span> <span class="keyword">new</span> AnalysisException(msg);</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;397</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; }</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;398</td> <td class="nbHitsUncovered"><a title="Line 398: Conditional coverage 50% (1/2).">&nbsp;849</a></td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp;<a title="Line 398: Conditional coverage 50% (1/2)."> } <span class="keyword">else</span> <span class="keyword">if</span> (engine.accept(file)) {</a></span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;398</td> <td class="nbHitsUncovered"><a title="Line 398: Conditional coverage 50% (1/2).">&nbsp;1698</a></td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp;<a title="Line 398: Conditional coverage 50% (1/2)."> } <span class="keyword">else</span> <span class="keyword">if</span> (engine.accept(file)) {</a></span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;399</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; extractAcceptedFile(input, file);</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;400</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; }</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;401</td> <td class="nbHitsCovered">&nbsp;885</td> <td class="src"><pre class="src">&nbsp; }</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;401</td> <td class="nbHitsCovered">&nbsp;1770</td> <td class="src"><pre class="src">&nbsp; }</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;402</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; } <span class="keyword">catch</span> (Throwable ex) {</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;403</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; <span class="keyword">throw</span> <span class="keyword">new</span> ArchiveExtractionException(ex);</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;404</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; } <span class="keyword">finally</span> {</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;405</td> <td class="nbHitsCovered">&nbsp;2</td> <td class="src"><pre class="src">&nbsp; close(input);</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;406</td> <td class="nbHitsCovered">&nbsp;2</td> <td class="src"><pre class="src">&nbsp; }</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;407</td> <td class="nbHitsCovered">&nbsp;2</td> <td class="src"><pre class="src">&nbsp; }</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;405</td> <td class="nbHitsCovered">&nbsp;4</td> <td class="src"><pre class="src">&nbsp; close(input);</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;406</td> <td class="nbHitsCovered">&nbsp;4</td> <td class="src"><pre class="src">&nbsp; }</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;407</td> <td class="nbHitsCovered">&nbsp;4</td> <td class="src"><pre class="src">&nbsp; }</pre></td></tr>
<tr> <td class="numLine">&nbsp;408</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;</pre></td></tr>
<tr> <td class="numLine">&nbsp;409</td> <td class="nbHits">&nbsp;</td>
@@ -780,16 +780,16 @@
<td class="src"><pre class="src">&nbsp;<span class="comment"> */</span></pre></td></tr>
<tr> <td class="numLine">&nbsp;469</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; <span class="keyword">private</span> <span class="keyword">static</span> <span class="keyword">void</span> close(Closeable closeable) {</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;470</td> <td class="nbHitsUncovered"><a title="Line 470: Conditional coverage 50% (1/2).">&nbsp;4</a></td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp;<a title="Line 470: Conditional coverage 50% (1/2)."> <span class="keyword">if</span> (<span class="keyword">null</span> != closeable) {</a></span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;470</td> <td class="nbHitsUncovered"><a title="Line 470: Conditional coverage 50% (1/2).">&nbsp;8</a></td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp;<a title="Line 470: Conditional coverage 50% (1/2)."> <span class="keyword">if</span> (<span class="keyword">null</span> != closeable) {</a></span></pre></td></tr>
<tr> <td class="numLine">&nbsp;471</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; <span class="keyword">try</span> {</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;472</td> <td class="nbHitsCovered">&nbsp;4</td> <td class="src"><pre class="src">&nbsp; closeable.close();</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;472</td> <td class="nbHitsCovered">&nbsp;8</td> <td class="src"><pre class="src">&nbsp; closeable.close();</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;473</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; } <span class="keyword">catch</span> (IOException ex) {</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;474</td> <td class="nbHitsUncovered">&nbsp;0</td> <td class="src"><pre class="src"><span class="srcUncovered">&nbsp; LOGGER.trace(<span class="string">""</span>, ex);</span></pre></td></tr>
<tr> <td class="numLineCover">&nbsp;475</td> <td class="nbHitsCovered">&nbsp;4</td> <td class="src"><pre class="src">&nbsp; }</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;475</td> <td class="nbHitsCovered">&nbsp;8</td> <td class="src"><pre class="src">&nbsp; }</pre></td></tr>
<tr> <td class="numLine">&nbsp;476</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp; }</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;477</td> <td class="nbHitsCovered">&nbsp;4</td> <td class="src"><pre class="src">&nbsp; }</pre></td></tr>
<tr> <td class="numLineCover">&nbsp;477</td> <td class="nbHitsCovered">&nbsp;8</td> <td class="src"><pre class="src">&nbsp; }</pre></td></tr>
<tr> <td class="numLine">&nbsp;478</td> <td class="nbHits">&nbsp;</td>
<td class="src"><pre class="src">&nbsp;</pre></td></tr>
<tr> <td class="numLine">&nbsp;479</td> <td class="nbHits">&nbsp;</td>
@@ -843,6 +843,6 @@
<td class="src"><pre class="src">&nbsp;}</pre></td></tr>
</table>
<div class="footer">Report generated by <a href="http://cobertura.sourceforge.net/" target="_top">Cobertura</a> 2.1.1 on 4/9/16 8:09 PM.</div>
<div class="footer">Report generated by <a href="http://cobertura.sourceforge.net/" target="_top">Cobertura</a> 2.1.1 on 6/16/16 6:46 AM.</div>
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